Salvelinus fontinalis (brook trout): 129838235
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Entry
129838235 CDS
T11136
Name
(RefSeq) optineurin-like isoform X1
KO
K19946
optineurin
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04137
Mitophagy - animal
sfon04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129838235
04137 Mitophagy - animal
129838235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129838235
Membrane trafficking [BR:
sfon04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
129838235
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
129838235
Autophagy
Mitophagy
PINK1-Parkin associated proteins
129838235
Xenophagy
Cargo receptors
129838235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CC2-LZ
NEMO
zf_C2H2_10
CENP-F_leu_zip
DUF4248
WipA_N
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
129838235
NCBI-ProteinID:
XP_055761014
LinkDB
All DBs
Position
39:9399959..9419359
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AA seq
567 aa
AA seq
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MYCPLACLHTASPCCRVMASSSPMVNGDISRGPGSHPGHSPTTGTLEETLQQMNRLIQEN
RDLKEALKQTNMSMKERFEGLSVWRDKQREEKDFLEGRLDEARGRVEALSSHNQELSMKV
EELEGEGKGQAETANQNAELEALRAQLVRLQAEKSDLVAMNSELQLKTGQGSEDDSFIEI
RIAREDTGKDLYHNERDPRYDMSVSRQESEELTVSQLLQSLRKETQRVEWLQIELQATKS
RITELERKETNTESSTQTSLLPEVVSPALATTACGTEPEAEPQQNSGKEKAASEVEDLKA
QMMTLFNELQQAQSKLGEAEGMKKNLQDRCRDVERDVVTLTAQLVEKQEVQSENDRLKLQ
VDSMKAQSQLEQRKAGEERTNLTQLKDAYTKLFEDYNELKQESKNREPLVTKEVGDLQTR
LDAAEKALAAKQQQIDVMKQEIYQKEKELETISVFQAQAEVYSSDFYAERAAREKIHEEK
ERLFAQLEFVKKQNTQLQDEVDSLGRQSLSDMQRRHMPRGGNMQGARGGDARDWQQQGNI
PEHVCPKCNEILPDLDSLQIHIMDCII
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgtattgtccacttgcatgtctccacaccgcctcaccttgctgtagagtgatggcgtcc
agctcccccatggtgaacggggacatctcccggggtcctggctctcacccaggccacagc
cccaccacaggcaccctggaggaaacgctgcagcagatgaaccgcctcatccaggagaac
cgagacctgaaggaggcgctgaagcagactaacatgtcgatgaaggagcgttttgagggt
ttgtctgtgtggagggataagcagagggaggagaaggacttcctggaggggaggcttgat
gaggcgcgcggccgtgtggaggccctctcctcgcacaaccaggagctcagcatgaaggtg
gaggagctggagggagaagggaagggacaggccgagacagccaatcagaatgcagaactg
gaggcgctgcgtgcccagctggtgcgtctgcaggcagagaagagtgacctggtggcaatg
aactctgaactccagctcaagacaggtcaggggtcagaggacgactccttcatagagatc
aggattgctagagaggatactggaaaggacctgtatcataatgaaagggaccccaggtat
gacatgagtgtatccaggcaggagtctgaggagctgactgtcagccagctgctccagtcc
ctgaggaaggagacccagagggtggaatggctacaaatcgagctccaggctaccaaatcc
agaatcacagagctggagaggaaagaaactaacacggagagctccacacagacctcacta
ctgccagaggtggtttccccagcactagccaccacagcatgtggtactgaaccagaggcg
gagccccaacagaactctgggaaggagaaggctgcgtcagaggtggaggatctgaaggct
cagatgatgaccctgtttaatgagctacagcaggctcagagcaaactgggcgaggcagag
ggcatgaagaagaacctgcaggacagatgtagggatgtggagcgcgacgtggtgactctg
acagcccagctggtagagaagcaggaggtacagagtgagaatgaccgactgaagctgcag
gtggacagcatgaaagcccagagccagctagagcagaggaaggctggagaggagaggact
aacctgacccagctgaaggatgcctacaccaagctattcgaggactacaatgagttgaag
caagagagcaagaacagagagccacttgtcactaaggaggtgggagacctgcagaccaga
ctggacgcagcagagaaggccctggctgctaagcaacagcagatagatgttatgaagcag
gagatatatcagaaggagaaggagctggagaccatctctgtgttccaggctcaggcggag
gtgtactcctctgacttctacgcagagcgagcagctcgggagaagattcacgaggagaag
gaacgtctgtttgctcagctggagtttgtcaagaaacagaacactcagttacaggacgag
gtggactcactgggcaggcaatctctgagcgatatgcagagaagacacatgccacgtgga
ggcaacatgcagggagccagaggtggtgatgccagggactggcagcagcaggggaatata
ccggagcacgtctgccccaagtgtaacgagatcctaccagacctggacagcctgcagatt
cacatcatggactgcatcatctga
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