KEGG   Salvelinus fontinalis (brook trout): 129838235
Entry
129838235         CDS       T11136                                 
Name
(RefSeq) optineurin-like isoform X1
  KO
K19946  optineurin
Organism
sfon  Salvelinus fontinalis (brook trout)
Pathway
sfon04137  Mitophagy - animal
sfon04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:sfon00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    129838235
   04137 Mitophagy - animal
    129838235
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sfon04131]
    129838235
Membrane trafficking [BR:sfon04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    129838235
 Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    129838235
 Autophagy
  Mitophagy
   PINK1-Parkin associated proteins
    129838235
  Xenophagy
   Cargo receptors
    129838235
SSDB
Motif
Pfam: CC2-LZ NEMO zf_C2H2_10 CENP-F_leu_zip DUF4248 WipA_N zf-C2H2
Other DBs
NCBI-GeneID: 129838235
NCBI-ProteinID: XP_055761014
LinkDB
Position
39:9399959..9419359
AA seq 567 aa
MYCPLACLHTASPCCRVMASSSPMVNGDISRGPGSHPGHSPTTGTLEETLQQMNRLIQEN
RDLKEALKQTNMSMKERFEGLSVWRDKQREEKDFLEGRLDEARGRVEALSSHNQELSMKV
EELEGEGKGQAETANQNAELEALRAQLVRLQAEKSDLVAMNSELQLKTGQGSEDDSFIEI
RIAREDTGKDLYHNERDPRYDMSVSRQESEELTVSQLLQSLRKETQRVEWLQIELQATKS
RITELERKETNTESSTQTSLLPEVVSPALATTACGTEPEAEPQQNSGKEKAASEVEDLKA
QMMTLFNELQQAQSKLGEAEGMKKNLQDRCRDVERDVVTLTAQLVEKQEVQSENDRLKLQ
VDSMKAQSQLEQRKAGEERTNLTQLKDAYTKLFEDYNELKQESKNREPLVTKEVGDLQTR
LDAAEKALAAKQQQIDVMKQEIYQKEKELETISVFQAQAEVYSSDFYAERAAREKIHEEK
ERLFAQLEFVKKQNTQLQDEVDSLGRQSLSDMQRRHMPRGGNMQGARGGDARDWQQQGNI
PEHVCPKCNEILPDLDSLQIHIMDCII
NT seq 1704 nt   +upstreamnt  +downstreamnt
atgtattgtccacttgcatgtctccacaccgcctcaccttgctgtagagtgatggcgtcc
agctcccccatggtgaacggggacatctcccggggtcctggctctcacccaggccacagc
cccaccacaggcaccctggaggaaacgctgcagcagatgaaccgcctcatccaggagaac
cgagacctgaaggaggcgctgaagcagactaacatgtcgatgaaggagcgttttgagggt
ttgtctgtgtggagggataagcagagggaggagaaggacttcctggaggggaggcttgat
gaggcgcgcggccgtgtggaggccctctcctcgcacaaccaggagctcagcatgaaggtg
gaggagctggagggagaagggaagggacaggccgagacagccaatcagaatgcagaactg
gaggcgctgcgtgcccagctggtgcgtctgcaggcagagaagagtgacctggtggcaatg
aactctgaactccagctcaagacaggtcaggggtcagaggacgactccttcatagagatc
aggattgctagagaggatactggaaaggacctgtatcataatgaaagggaccccaggtat
gacatgagtgtatccaggcaggagtctgaggagctgactgtcagccagctgctccagtcc
ctgaggaaggagacccagagggtggaatggctacaaatcgagctccaggctaccaaatcc
agaatcacagagctggagaggaaagaaactaacacggagagctccacacagacctcacta
ctgccagaggtggtttccccagcactagccaccacagcatgtggtactgaaccagaggcg
gagccccaacagaactctgggaaggagaaggctgcgtcagaggtggaggatctgaaggct
cagatgatgaccctgtttaatgagctacagcaggctcagagcaaactgggcgaggcagag
ggcatgaagaagaacctgcaggacagatgtagggatgtggagcgcgacgtggtgactctg
acagcccagctggtagagaagcaggaggtacagagtgagaatgaccgactgaagctgcag
gtggacagcatgaaagcccagagccagctagagcagaggaaggctggagaggagaggact
aacctgacccagctgaaggatgcctacaccaagctattcgaggactacaatgagttgaag
caagagagcaagaacagagagccacttgtcactaaggaggtgggagacctgcagaccaga
ctggacgcagcagagaaggccctggctgctaagcaacagcagatagatgttatgaagcag
gagatatatcagaaggagaaggagctggagaccatctctgtgttccaggctcaggcggag
gtgtactcctctgacttctacgcagagcgagcagctcgggagaagattcacgaggagaag
gaacgtctgtttgctcagctggagtttgtcaagaaacagaacactcagttacaggacgag
gtggactcactgggcaggcaatctctgagcgatatgcagagaagacacatgccacgtgga
ggcaacatgcagggagccagaggtggtgatgccagggactggcagcagcaggggaatata
ccggagcacgtctgccccaagtgtaacgagatcctaccagacctggacagcctgcagatt
cacatcatggactgcatcatctga

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