Salvelinus fontinalis (brook trout): 129838242
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Entry
129838242 CDS
T11136
Name
(RefSeq) basic helix-loop-helix ARNT-like protein 2 isoform X1
KO
K09099
aryl hydrocarbon receptor nuclear translocator-like protein 2
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129838242
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
129838242
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
PAS_4
Per3-like_PAS-A
bHLH_INO2
bHLH_SAC51
Motif
Other DBs
NCBI-GeneID:
129838242
NCBI-ProteinID:
XP_055761028
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All DBs
Position
39:12850731..12874359
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AA seq
679 aa
AA seq
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MRRVGLRGAVSMSFALKNNFGSPPKCRSVEHTRGSPGTRSWKFNNFEHICCILPCNFAGP
LQLGETNSLPVSRPDVITPHLAGAMPNVITPHKAGAMPIQELSRKRKGDIDNRENGDAEM
EEQQSRSEDDDQQVTIKCFREPHSQIEKRRRDKMNILIDELSAMIPSWNPMAKKLDKLTV
LRMAVQHLKALKAGASSSFTDFNYKRKPSFLPQDDLKHLVLTAADGFLFVVSCDRGKILF
TSESVLKFLNYSRLELIGQSLFDYVHPKDISKVKEQLSASGLYPRERLIDAKTGLQVQDL
PVGAVQLCTGARRSFFCRMKHSRTVMKTEDKTIQPSSPKKKESQRYCTVHCTGYMRSWPS
TQLDAESDDNESSHLSCLVAVCRVHPNDACQPSREVKVKPTQFVTRFAIDGKFTFVDQRA
TTVLGYLPQELLGTSCYEYFHQDDLQHLAETHRKVLRSKEKIETSCYKFKTKHGSFVMLQ
SQWFSFINPWTKEVEFIVSTNRVLGPGHTETEQPSSSKLLDEESKRTILIPGISSGITTM
IYAGSIGTQIANELLDSNRVNCSPSSGTSSPFCPPQDRSPMVSSHANTPNDEVTDSDTVS
KSGSESASKGATYAGSDTHMDTARSPPGESSQIDLDSMVGPGLGILSNDEAAMAVIMSLL
ETDANLGDAVDFDNMHWSH
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgggtgggattgaggggagctgtttccatgtctttcgctttgaaaaacaatttt
ggttctcccccaaaatgtaggtcagtggagcacactcgaggaagtcctgggacgcgctcg
tggaagtttaataattttgaacatatttgttgcattctaccatgtaatttcgcaggaccc
ttgcagttaggagaaaccaatagccttcctgtttctcggcctgacgtcataacgccccac
ctggcaggagccatgcctaatgtcataaccccccacaaggcaggagccatgccaatccaa
gagctgtctaggaaacggaagggggatatagacaacagggaaaatggtgatgctgaaatg
gaggagcaacagagcagatcggaagacgatgatcaacaggtgacaataaaatgcttcagg
gagccacacagccaaattgaaaagcggcggagggacaaaatgaacatccttattgacgag
ctgtcagccatgatcccctcctggaaccccatggccaaaaagcttgacaaactcacggtt
ctgcgaatggctgtgcagcatctcaaagccctgaaagcaggtgccagcagttcctttact
gactttaactacaaacgcaagccttcgtttctgcctcaggatgatctcaagcacctggtg
ctcacggctgcagatgggttcctgttcgtggtgagttgtgacagggggaagatcctcttt
acctcagaatccgtcttgaagttcctcaactacagtcggttggaactaattggacagagt
ctttttgattatgtccacccgaaggacattagtaaagtgaaagagcagctgtcagcctca
ggattataccctcgtgaacggctcatagatgccaaaacagggttacaggtgcaggacctt
cctgtgggagcagttcaactgtgtacaggggcacggcgctccttcttctgccgcatgaag
cacagcagaacagttatgaagacagaagacaaaaccatccagcccagcagccccaagaaa
aaggagtctcagcgatactgcactgtccattgcactggttacatgcggagttggccatcc
acccagctggatgctgagagcgacgataacgagtcctcccatctgtcctgcctggttgct
gtgtgccgcgttcaccctaacgatgcctgtcagccctcacgagaggtcaaggtcaaaccc
acccagtttgtcactcgctttgcaattgacggcaagttcacctttgtggaccaacgagcc
actactgttctgggctacttgccacaggaactactggggacgtcttgttacgagtacttc
caccaggacgacctgcaacacctcgcagagacacataggaaagttctccgcagtaaagag
aagattgagaccagctgctacaagttcaaaactaaacatggctccttcgtcatgcttcaa
agtcagtggtttagttttataaacccgtggaccaaagaagtggagtttattgtgtcaaca
aaccgagttttgggacccggtcacacagaaactgaacagccgagcagctccaagctgttg
gacgaagagagcaaacgtactatccttatccctggcatctccagtggcataaccactatg
atctacgctggcagcatagggacccagatagcaaacgagctcttggactccaacagggtc
aattgttctccatccagtggaacctccagtcccttctgtccacctcaggacaggtctcca
atggtctcctctcatgccaacacaccaaatgatgaggtgactgactcagatacagtgagc
aagtctggatcagagtctgcttcaaagggggccacatacgctggtagcgacacacatatg
gacacagcccgttctcccccaggagagagctcccagattgacctggacagcatggtggga
ccaggcctcggtatcctgagcaacgatgaggctgccatggccgtcatcatgagcctgctg
gagactgatgccaacctgggagatgcagtagactttgacaacatgcactggtctcattag
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