Salvelinus fontinalis (brook trout): 129838552
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Entry
129838552 CDS
T11136
Name
(RefSeq) homeobox protein OTX1 B-like isoform X1
KO
K09326
homeobox protein OTX1
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129838552
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
129838552
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
CPSF73-100_C
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
129838552
NCBI-ProteinID:
XP_055761585
LinkDB
All DBs
Position
3:10845717..10851414
Genome browser
AA seq
358 aa
AA seq
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MMSYLKQAPYGMNGMGLSGTAMDLLHPSVGYPDRNGFEEFPLTGFYSISAHPRKQRRERT
TFTRTQLDILESLFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQAQSGNNA
KVRPAKKKSSPTRESTGSESSGQFTPPAVSSTGSSSSSSSGGTHPSGQGLSSTSTSVTAP
VSSIWSPAPISPAPAPPPVPDPAPPTSASCMQRSVSGTGGTSSYPVSYSQTAASYGQGYP
APASTGSYFGGVECSSYLAPMHSHHHPHHPHQLSPMTGSSMSGHPHHHIGQTSGHHHHHH
PHHHQAYSGAGLAFNSSDCLDYKEQTAAAAASSWKLNFNTTDCLDYKDQASSWRFQVL
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcatacctcaaacaggccccgtacggcatgaacggaatggggctcagcggtacg
gccatggacctactgcacccatcagtggggtacccagatcgaaatggcttcgaagagttt
ccattgacaggtttctattccatttcagcgcatccgaggaaacagcggagagagaggaca
acttttactcgtactcagctggacattctggaatcccttttcggcaagacgcgctaccca
gacattttcatgcgggaagaagtcgcactgaaaatcaatttgcctgagtctagagtccaa
gtatggttcaagaacaggagagccaagtgccgtcagcaggcccagagtggaaacaatgct
aaagtccggcctgccaagaagaagtcctctccaaccagggagagcacaggctcagagagc
agtggtcagttcacccctccggcagtgtccagcaccggctcctcttcctcttcctcttct
ggtggcactcatccctccggccaaggcctgagcagcacttctacctccgtcaccgcccca
gtgtcctccatctggagccctgcgcccatctccccggcccctgcaccaccccctgtcccc
gaccctgctcccccaaccagtgcctcctgcatgcagaggtctgtgtcaggtactggaggc
acgtcctcctacccggtgtcctacagccagacagcggcgtcctatgggcagggctacccc
gccccggcgtcaacgggctcctacttcggaggggtggaatgcagctcatacctggccccc
atgcactctcaccaccacccccaccatccgcaccagctcagccccatgacgggctcctcc
atgtctggccacccgcaccaccatatagggcagacctcagggcaccaccaccatcaccac
ccccaccaccaccaggcctacagcggggccgggctggccttcaactcctcagactgtctg
gattacaaagaacaaacggccgcggccgcagcctcttcctggaagctcaacttcaacacc
accgactgcttggactacaaagaccaggcctcctcctggcggttccaagtcttgtga
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