Salvelinus fontinalis (brook trout): 129838595
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Entry
129838595 CDS
T11136
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
129838595
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfon02000
]
129838595
Transporters [BR:
sfon02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
129838595
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
129838595
NCBI-ProteinID:
XP_055761650
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Position
39:complement(21969676..21991895)
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AA seq
620 aa
AA seq
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MNVIAGLSNAKNSSRLKDLVPVPQPLSEEKMQERGQWSNKMEFILSVMGSIIGLGNMWRF
PYLCYKNGGGAFLIPYLIFLFTCGIPVFFLETALGQYTSEGGITCWRKISPLFEGLGYGT
QIIVALLNSYYIVVLAWGIFYLSFSFSWDLPWSSCNNTWNTENCVEFQRRNNSVNYTLPE
NSTSPVIEFWERRALRLSSGIDHMGSLNWDLAFCLAIAWVMCYFCIWKGVKSTGKVVYFT
ATFPYLMLIVLLIRGVTLPGADLGIKFYLYPDLSRLADPQVWMDAGTQIFFSYAICLGSL
IALGSYNKYNNNCYKDCLALCFLNSGTSFVSGFAIFSILGFMAYEQDVPISEVAESGPGL
AFIAYPRAVAMMPFSSLWAVFFFIMIILLGLDSQFVCVESLTTAMVDMYPEVFRRKNRRE
LFLALVAFISFLMGLVMLMEGGLYVFQLMDYYAASGMCLLFMAIFETVSIAWVYGVDRFY
DNIEDMIGYRPGPYIKYCWLYVTPATCIATFAFSLIKYTPLKYNNEYVYPWWGYVIGWLL
ALASMVCIPFWIIYKLSTTDGTFRERIHILLQPSNDLPKTKREQERMLATFDPKDEGGME
PVGVPIKDGYLPVGVKDSHC
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttatagcgggcctctcaaatgccaagaacagcagcaggttgaaggacctggtc
ccggtccctcagcccctgtcagaggagaagatgcaggagaggggccaatggagcaacaaa
atggagttcatcctgtctgtgatggggtccatcatcggcctggggaacatgtggcgcttt
ccttacctctgctacaagaacggaggaggtgcatttctcatcccctacctgatcttcctg
ttcacctgtggcatacctgtgttcttcctggagactgctctgggccagtacaccagtgag
ggaggcatcacctgctggaggaagatcagtccactgtttgagggtcttggctatggcacc
cagatcattgtggctctgctgaactcctactacattgtggttctggcttggggaatcttc
tacctgtctttctccttctcctgggatctcccttggtcctcctgtaacaacacctggaat
acagaaaattgcgtggagtttcagaggaggaacaattctgtcaactacaccctgcccgaa
aactccacatcccccgtcattgaattctgggagagaagagccttgcggctgtcgtccggc
atcgaccacatgggctctctgaactgggacctggccttctgtctggccatcgcctgggtc
atgtgttacttctgcatctggaaaggggtcaaatccactgggaaggtggtgtacttcaca
gctaccttcccctacctgatgctaatagttctgctgattcgtggagtcactttacctgga
gcggacctagggatcaagttctacctttaccctgacctgtcaagactagcagaccctcag
gtatggatggatgcaggcacccagatcttcttctcctatgccatctgtctaggctccctc
atagcattggggagttacaacaagtacaacaacaactgctacaaagactgcctggccctg
tgcttcctgaacagtgggacaagctttgtgtcaggctttgccatcttctccatcctgggt
ttcatggcttatgaacaggatgtccccatctcagaggtagcagagtctggtcctggtctg
gccttcattgcgtaccctcgtgctgtggccatgatgccgttttcttcactatgggccgtc
ttcttcttcatcatgatcatcctgctagggttggacagtcaatttgtgtgtgtagagagc
ttgacaacggccatggtggacatgtatcccgaggtgtttcgtcgtaagaaccgcagggag
ctctttctggctttagtggccttcatctccttcctcatgggcttggtcatgctgatggag
ggtgggttatatgtattccagctgatggactactatgctgctagtggcatgtgtcttctc
ttcatggccatctttgagacggtctccatcgcatgggtctatggtgtcgaccgcttctat
gataacatcgaagacatgattggctaccgtccaggaccttacattaaatactgctggctg
tatgtcaccccagccacatgcattgccacctttgcgttctccctcatcaagtacacccct
ctgaagtacaacaatgagtatgtgtacccctggtggggctatgtaataggctggctcctg
gctcttgcctccatggtctgtatccctttctggattatctacaaactctccaccacagat
ggaacattcagagagcgcattcacatcctcctccagccctctaacgacctacccaaaacc
aagagagaacaggagaggatgctggccacctttgaccccaaggacgagggaggcatggag
ccagtaggggtaccaatcaaagatggctacctcccagtgggggtgaaggactcacactgc
taa
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