KEGG   Salvelinus fontinalis (brook trout): 129838747
Entry
129838747         CDS       T11136                                 
Name
(RefSeq) U2 small nuclear ribonucleoprotein B''-like
  KO
K11094  U2 small nuclear ribonucleoprotein B''
Organism
sfon  Salvelinus fontinalis (brook trout)
Pathway
sfon03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sfon00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129838747
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sfon03041]
    129838747
Spliceosome [BR:sfon03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    129838747
 Complex B
    129838747
 Complex C
   U2 SnRNP specific factors
    129838747
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_5 F07F6_N RRM_MUD2_C RRM_ACIN1 DUF4523 xRRM
Other DBs
NCBI-GeneID: 129838747
NCBI-ProteinID: XP_055761882
LinkDB
Position
3:complement(11288525..11294140)
AA seq 219 aa
MDIRPNHTIYINNVNDKIKKDELKRSLYALFSQFGQVMDIVAMKTMKMRGQAFVVFKELA
SATNALRQLQGFPFYNKPMRIQYAKTDSEVISKIRGTFGDKDKKKERKKKAQDQVANVAK
KPALGSASTNNAPTTMQVPDNPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGK
HDISFVEFESEGQAGVAKDALQGFRITAQCAMKITYAKK
NT seq 660 nt   +upstreamnt  +downstreamnt
atggatattcgaccaaaccacaccatttacatcaataatgtaaatgataagatcaagaag
gatgaactgaagcggtcactctatgccctgttctctcagtttgggcaagtcatggacatt
gttgccatgaaaaccatgaagatgagagggcaggcatttgtggtgttcaaagagcttgca
tcagctacgaacgcactgcgtcaacttcaaggatttcctttctacaataagcccatgcgc
attcagtatgctaagacagactctgaggtgatctccaaaatcagaggcacatttggggac
aaggacaagaagaaggaaaggaagaagaaggctcaagatcaagtggccaatgtggccaag
aaaccagcactgggatcagccagcacaaacaacgctccaacaaccatgcaggttccagac
aatccacccaactacattttattccttaataacctgccagaggaaactaatgaaatgatg
ctctccatgctgttcaatcaattccctggtttcaaagaggtgcgactcgtccctggcaaa
cacgacatctcctttgtagagtttgagagtgagggccaggctggagtggccaaagatgca
ctgcagggattccggattacggcccaatgcgccatgaagatcacttatgccaagaagtag

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