Salvelinus fontinalis (brook trout): 129838777
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Entry
129838777 CDS
T11136
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sfon04054
]
129838777
Pattern recognition receptors [BR:
sfon04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
129838777
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR_2
TIR
LRR_4
LRR_5
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
129838777
NCBI-ProteinID:
XP_055761927
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Position
39:complement(25836431..25846028)
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AA seq
943 aa
AA seq
DB search
MRAMFPLFLWIQSVSGWMHPKCHVYNSGEHFPTWNYCPLAEQYTAACRDVTAIEEDLLGL
PSNINTLCISMKHGENSSMSLGSFARFQYLKCLFIGGCFPQILPAGNSQGLQNLQHMYIN
GLVTGCCDCHIGPNTFRDLVKLSKLTITGYRLSAMAPDVFHGIPQLQSVFIHEPCGEDLS
EILCRIINIMSLTELNVQAPNIQSLNQLNCSILNATESNLTSASLGFGQINHIEEGALAC
LQNLTRFSGVLNQDVLLRLPLSGIKQIQFLYFSGITDIDFESICNVVFLLSIKEIHLANV
NTRSLSMSSVELCIGLEYMGFHGLEAIHSSPHLKLNFISSLKSLKILYVCDQTANSLDLC
SFRKQPITWLTRLTFMSRNVQTLFAKQFSCLENLRTLDLSCCFISNIEDFAFFGLANLES
LDMTQNNITQLYANTFIGLHSLTLLDLRGNPRIYNIEAMSFAQLTCLRQVFLGYLNYPPR
ELSTVIKLNLTRVFGDVLSHLTHLYISAGMRPMQLIIGSNVTSKQNLSLQLKGQTVSFED
CDRPFFQSVTHLHADAEEFLCGAEFMGKFFTSVETFVYRSKLSAKSVDLTSMNQLIHLRK
LTLIQVDLLIQRSADIIFHNLTKLEVLKLSNCRIDSLEGGLTKDFKSLKTLYLRIENIYN
VIYSFTEPLSSLKYLILDTLQIFCSCDNAWLIAWAKPYRPVEVIMLNHEVMYKLEDLICL
SDNGLDTPNFVKYTEANCTTEVGFVLFAATGLGVLFFMLVVLVHNLAGPYLLPLYYITLG
WLSEAMRSNTRGRYHYDAFVSYSGKDERWVVEELLPNLEKRGPPFLRLCLHSRDFQLGKD
IVENITDSLYRSRHTLCLVSRHYLRSNWCSLEMKLATSRLQVEQRDILLLVFLEKIPPCR
LSPHHRLARLVKTRTYLDWPQDPHQHQAFWDRLWAKLKPPTEA
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgagagctatgtttcccctgttcctgtggattcagagtgttagtggatggatgcatcct
aaatgccacgtttataacagtggcgaacactttcccacctggaactactgtcctttggca
gaacagtacactgctgcctgtcgagatgtcacagccatcgaggaggatctgcttggactt
ccctctaatatcaataccctctgcatatctatgaaacatggtgaaaatagttccatgtct
ctgggctcttttgctcgttttcagtatttgaagtgcctgttcattggaggctgttttcct
caaatccttccagctgggaatagtcagggccttcaaaatctgcaacatatgtacattaat
ggattggtcactgggtgctgtgattgtcatattgggcctaacacattcagagatctagtc
aagctaagtaagttgaccataactggttataggctatcagcaatggcaccagatgttttc
catggcatacctcaattacaaagtgtctttattcatgaaccctgtggagaggatttgtca
gaaatactatgcagaataattaatataatgtcacttacagagttaaatgtacaggcacca
aatatacaatcattaaaccaattaaactgctccatcttaaacgccaccgaaagcaatcta
acgagcgctagtttaggtttcggtcaaataaaccatatagaggaaggtgcactggcttgt
ctccagaacctgacacgtttttctggggtcctaaaccaggatgtcctactgcgccttccc
ctgtctggcattaagcaaatccagttcttgtatttctctggtatcactgacattgatttt
gaaagtatctgtaatgtagtgtttttgctttcaatcaaggaaatacatttagccaatgtc
aatacaaggagcctctccatgtccagtgtggaattgtgcattgggctggaatatatgggt
tttcatggacttgaagccatccattcttctccccatttgaaattgaattttatttccagt
ctcaaaagccttaaaatattatatgtatgtgaccagacagcaaacagtcttgacctctgc
tccttccgaaaacaaccaatcacatggttaacacgactcactttcatgtcgagaaatgta
caaacgctttttgcaaaacagttcagttgtcttgagaacctgcggactctagatttgtca
tgttgtttcatttcaaacattgaagactttgctttcttcggattggcaaatctggagtcc
ttagacatgacacaaaataatataacccagttatatgcaaacacgtttattggtttacat
agtttgacattgttagacctcaggggaaatccacggatctacaatattgaagcaatgtct
ttcgcacaacttacgtgtctaagacaagtgtttctggggtacttgaactatccaccaaga
gaactatccaccgtgataaagctgaatctgacacgtgtattcggtgacgttctgagtcac
ctgactcatctgtacattagtgcaggtatgaggccaatgcagttgattattggcagtaac
gtcacatctaaacagaacctgagtctccaactcaaaggccagacagtgtcatttgaagac
tgtgacagacccttctttcagtctgtaacccatcttcatgctgatgctgaagaattcctt
tgtggagctgaattcatgggaaagttcttcacgtctgtggagacatttgtctacagatca
aagctttcagctaaaagtgtggatttaacatcaatgaatcagctgattcacctgaggaaa
ctgactctaatacaggtggatcttttaatacagcgttctgccgacatcatttttcacaac
ctgaccaaactggaggttctgaaactttcaaactgcaggattgactctttggaggggggt
ttaactaaagactttaaatccttgaaaacattatatttgcgtatcgagaacatttataat
gtaatctacagctttactgaacctctctctagcctaaagtatttgatacttgatacatta
cagattttttgcagttgtgacaatgcttggctcattgcatgggcaaagccgtacaggccg
gttgaagtgatcatgcttaatcatgaagttatgtataaattagaagacttgatatgcttg
tcagacaatggactagacacacctaactttgtcaagtatacagaagccaactgcacaaca
gaggtgggctttgtgctctttgctgcgactggcctgggagtcctgttcttcatgctggtg
gtgctggtccataatctggccggtccttacctcctccccctctactacatcacccttggc
tggctgtcggaggccatgcgatcaaacaccagggggcgctaccactacgatgcgtttgtc
tcctacagcgggaaggacgagcgctgggtggtggaggagctactacccaacctggagaag
agaggtcctcctttcctgcgcctctgtctgcacagcagggacttccagctggggaaggac
attgtggagaacatcacagacagcctttaccggagccgacacaccctctgcctggtcagc
cgccactacctgcgcagtaactggtgctccctggagatgaagctggccacctccaggctg
caggtggagcaaagggacatcctcctcctggtcttcctggagaagatcccaccgtgccgg
ctatctccccaccacaggctggctcgccttgtcaagactaggacctatctggactggccc
caggacccccatcagcaccaggcattctgggacagactgtgggctaaactgaaacctcca
actgaagcctga
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