Salvelinus fontinalis (brook trout): 129839309
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Entry
129839309 CDS
T11136
Name
(RefSeq) eukaryotic initiation factor 4A-III isoform X1
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03013
Nucleocytoplasmic transport
sfon03015
mRNA surveillance pathway
sfon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129839309
09122 Translation
03013 Nucleocytoplasmic transport
129839309
03015 mRNA surveillance pathway
129839309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129839309
03041 Spliceosome [BR:
sfon03041
]
129839309
03009 Ribosome biogenesis [BR:
sfon03009
]
129839309
03012 Translation factors [BR:
sfon03012
]
129839309
Enzymes [BR:
sfon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129839309
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129839309
mRNA cycle factors
Stress granule specific factors
129839309
Spliceosome [BR:
sfon03041
]
Complex C
Other components
EJC/TREX
129839309
Ribosome biogenesis [BR:
sfon03009
]
Eukaryotic type
90S particles
Helicases
129839309
Translation factors [BR:
sfon03012
]
Eukaryotic type
Initiation factors
eIF-4
129839309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129839309
NCBI-ProteinID:
XP_055762607
LinkDB
All DBs
Position
40:complement(28569945..28580586)
Genome browser
AA seq
406 aa
AA seq
DB search
MEVATVPRTRRLLKEEDMTKIEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQ
QRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKV
LLALGDYMNVQCHSCIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLV
LDEADEMLNKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTNKFMTDPIRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVS
SMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI
GRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggaagtagccactgtaccgcgcacgaggcgtctattgaaggaggaagacatgaccaag
atcgagtttgagaccagcgaggaggtcgatgttactcctactttcgacacgatgggccta
cgagaggatctcctccgtgggatatacgcatacggattcgagaagccttccgcaatccaa
caaagagcaattaaacagatcatcaagggtagagatgtcattgcacagtctcagtcagga
acaggaaagactgccacgttttgcgtatcagtgctgcagtgtcttgacattcaggtgcgt
gaaacccaggcactgatcctggctcctaccagagagttggctggacagatacagaaggtg
ctcctggccctaggtgactacatgaacgtccagtgtcattcctgcatcggagggacaaac
gtgggtgaggacatccgcaaactggactatggccagcacgtggtagcagggacccctggg
agagtgtttgatatgatccgcaggaggagtttgaggacgcgtgccatcaagatgctggtg
ctggacgaagcagacgaaatgctcaacaagggtttcaaagagcagatctacgacgtgtac
cggtacctgccccccgccacccaggtgtgtctgatcagcgccacgctgccccacgagatc
ctggagatgaccaacaagttcatgaccgaccccatccgcatcctggtcaaacgtgatgag
ttgactctagagggcatcaagcagttcttcgtggcagtagagagggaggagtggaagttt
gacaccctgtgtgacctgtacgacaccctcaccatcacgcaggcggtcatcttctgcaac
accaagcggaaggttgactggctgactgagaagatgagggaggccaacttcaccgtttcc
tccatgcacggagacatgccccagaaggagagggagtccatcatgaaagagttccggtcc
ggcgccagccgagtgcttatctccactgatgtgtgggcccgaggtctggacgtgccccag
gtgtccctcatcatcaactacgacctgcccaacaacagagagctgtacatccacaggatt
ggccgatcgggccgttacggccgcaagggtgtggccatcaactttgtgaagaacgacgac
atccgtatcctccgtgacattgagcagtactattccacacagatcgatgaaatgccaatg
aacgtggctgacctgatctaa
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