Salvelinus fontinalis (brook trout): 129839348
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Entry
129839348 CDS
T11136
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04517
IgSF CAM signaling
sfon04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129839348
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129839348
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sfon04812
]
129839348
Cytoskeleton proteins [BR:
sfon04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
129839348
Intermediate filaments
Intermediate filament-binding proteins
129839348
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
CH_2
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
129839348
NCBI-ProteinID:
XP_055762697
LinkDB
All DBs
Position
40:29050037..29168547
Genome browser
AA seq
2350 aa
AA seq
DB search
MTTVAAEYEHMEITQQYSSGDTANNRWDDEWDNENSSARLFERSRIKALADEREAVQKKT
FTKWVNSHLSRVSCRITDLYRDLSDGRMLIKLLEVLSGEKLPKPTRGRMRIHCLENVDKA
LQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETDGDNKEKRSAKDA
LLLWCQMKTAGYPNVNIRNFSTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHHNLQNAF
NLAEQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAI
ETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLNGVQQQLQAFNTYRTVEKPPKFTE
KGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKTWERLEKAEHERELALRTELIRQE
KLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVDAATKKHEAIETDITAYEERV
QAVVSVAKELEAEKYHDIKRIAARKDNVIRLWEYLLELLKARRQRLEMNLGLQRVFQEML
YIMDWMDEMKMMLLSQDYGKHLLGVEDLLQKHALVEADIGIQADRVKAVNNNAQKFAIDG
DVYKPCDPQVIRDRVAHMEFCYQELTQLAAERRARLEESHRLWKFLWEMAEEEGWIREKE
QILSSDESGKDLTGTVRLLSQHRALEDEMSGRAGHLQHTITEGQAMADGGHFGAAKIREC
ITNLRAQWAALEELAAVRKAHLEEACALHQFQADADDADAWTLDALRIVSSGEVGHDEFS
TQALVRKHKDATAEVASYRPVIDALHEQAGALPEEQVQSEEVKGRLAGIEERYKEVAELT
RLRKQALQDALALYKMFSEADACEVWIDEKEQWLNSMEIPEKLEDLEVIQHRFESLEPEM
NNQASRVAVVNQIARQLMHNGHPSEKNIKSQQDKLNNRWSQFRDLADQKKESLISALGVQ
NYHLDCNETKSWIREKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEDKLGDLRGE
AERLACEHPDQAKAIKDRLAKITAVWEEMKATLRNREESLGEASKLQQFLRELDDFQSWL
SRTQTAVASEETPNTLAEAEKLLAQHEGIKNEIRNYEEDYQKMRDMGEMVTQGQTDAQYM
FLRQRLQALDTGWNELHKMWENRQNLLFQSHAYQLFLRDTTQAEAFLNNQEYMLVHTEMA
TTLEGAEGAIKQQEDFMTTMDANEEKINGVVEAGRRLASDGNINADRIQERVTSVDDRHK
KNREAALELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQA
FMAELQSNKEWLDKIEKDGMQLVLEKPETESVVKEKLSALQKMWEVLESTTQTKAQCLFD
ANKAELFTQSCADLDKWLGGLEGQIQSDDYGKDLTSVNILLKKQQILENQVEVRQREVVQ
LQSQALVLSQEGNVTEEVDCQRQMVEHKFKELLDPLRKRKNFLVASREIHQFNRDVEDEI
LWVEERMPIATSTEHGHNLQTVQLLIKKNQTLQKEIQGHQPRFDDIFERSESLLMEDSLA
VEAIRQHLADLQQLWGLMIEETEKRHARLEQSHNAQKYYFDAAEAEAWMSEQELYMMAEE
KAKDEQSSVAMLKKHQIVEQSVEDYAETVHQLSKTSRGLTAAGHPESERIGMRQSQVDKL
YAGMKDLSEERRGKLDERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQER
FREFARDTGNIGQERVDAVNRLSDKLINAGHADAATVAEWKDGLNEAWADLLELIDTRTQ
ILAASYELHKFYHDAKEILGRILDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQ
VRQLQEDAVRLQSAYAGDKADDIQRRESEVLEAWNTLLEACDVRRVHLLDTGDKFRFFSM
VRDLMLWMEDVIRLIEAQENPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKSLLA
RKHYASEEIKDKLLQLMDKRKDMIDKWEDRREWLRLILEVHQFGRDAGVAEAWLLGQEPY
LFGRELGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEERRRK
PPLPEPLPVQDSPLQSGVENGLQNGLPSDQDSPQNGLDRVEIMNGVAEQNSKDPSPIPSP
TASRQGKGSLSSTLLTQNHYSPAAQMEGFLHRKHEWEGHNKKASSRSWHNVYCVIKNQEM
GFYKDNKGAGQGIPYHNAIPISLMGAVCDVAMDYKKKKHVFKLRVADGNEYLFQAKEEEE
MSTWIQAILNAGTPDKVSITPSNQSTPASSRAQTLPATVTLTTESSPGKREKDKEKDKEK
RFSLFGKKKL
NT seq
7053 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagtagccgcggaatatgaacacatggagatcacgcagcagtacagtagcggc
gacacggccaacaaccgctgggatgacgagtgggataatgagaacagctcggctcgcctg
ttcgagcgctcgcgcatcaaggccctggcagatgagcgcgaagcggtgcagaagaagacc
ttcaccaaatgggtgaactctcacctctcccgggtgtcctgccgcatcacggacctgtac
agggacctgagtgatggacgcatgctcatcaaactgctggaggtgctatctggggagaaa
ctgcccaagcccaccaggggacggatgcgtatccactgcctggagaatgtggacaaggcc
ctgcagttcctcaaggagcagagggtccacctggaaaacatgggctcacatgacatcgtc
gacggcaaccaccgcctcaccctgggcctcatctggaccatcattctcaggttccagatc
caggacattagtgttgagactgatggcgacaacaaggagaagagatcagccaaggacgcc
ctgctcctctggtgccagatgaagactgctggctatccgaacgtgaacattcgcaacttc
agcaccagttggcgagacggcatggcattcaatgccctcatccataagcacaggccagac
ctgattgactttgacaagctgaaaaagtccaatgcccaccacaacctgcagaatgccttc
aatttggctgagcagcatctggggcttaccaagctcctggacccagaggatatcagtgtg
gaccaccctgatgagaagtctgtcatcacatacgtggtgacatactaccactacttctcc
aaaatgaaggccctgaaagtggaggggaaacgtattgggaaggtactagacaatgccatt
gagacagagaagatgattgagaagtacgagtctctggcctcagacctgctggagtggatc
gagcagaccatcatcatcctcaacaatcgcaagtttgccaactctttaaacggggtgcag
cagcagcttcaagccttcaacacatatcgcacggtcgagaaaccccctaagtttactgag
aagggcaacctggaggtgcttctgtttaccatccagagcaagatgagggccaacaatcag
aaagtctacatgcccagggagggcaaactcatctctgacattaacaagacctgggagaga
ctggagaaggcagagcatgagcgggagctggctctgaggacagagctgattcgacaggag
aaactggagcagctggctcgccgctttgaccgcaaggctgccatgagggagacctggctg
agtgagaaccagcgcctcgtctcacaggacaactttggcttcgaccttccagcggtggac
gcggccaccaagaagcatgaggccatcgagacggacattacggcttacgaggagcgtgtg
caggccgtggtgtccgtcgctaaggagctggaggcagagaaataccacgacatcaaacga
atcgcagcacgcaaggacaatgtgatccggctgtgggagtacctgctggagcttctgaag
gcgaggcgccagcgcctggagatgaacttgggtctgcagagggtcttccaagagatgctt
tacatcatggactggatggacgagatgaagatgatgctactgtcccaggactatgggaag
catctgctcggagtggaggatctcttgcagaaacatgccctggtggaggctgacatcggc
atccaggccgaccgagtcaaagctgtcaacaacaatgctcagaagtttgccatcgacggc
gatgtttacaagccctgtgaccctcaggtaatacgcgaccgcgtggcacacatggagttc
tgctatcaggaactgacccagctggctgccgagcgacgggcccgcctggaggagtcccac
cgcctctggaagttcttatgggagatggccgaggaggagggctggatccgtgagaaggag
cagatcctgtcgtcggacgagagcggcaaggacctgacgggcactgtgcgcctgctgagc
cagcaccgcgccctggaggacgagatgagtggccgtgcaggtcacctgcagcacaccatc
actgagggccaggccatggccgacggcggccacttcggcgctgccaagatccgtgaatgc
atcaccaacctgcgggcacagtgggcagcgttggaggagctggcagccgtgaggaaggcc
catctggaggaagcgtgtgccctgcaccagttccaggcggacgcagatgacgccgacgcc
tggaccctggatgccctgcgcatcgtgtccagcggcgaggtgggccatgacgagttctcc
acacaggccctggtgcgcaaacacaaggacgccaccgccgaggtggccagctatcggccg
gtgatcgatgcactccatgagcaggcgggcgccttgcctgaggagcaggtccagtcggaa
gaggtcaagggccgcctggcaggcatagaggagcgctacaaggaggtggccgagctgacc
cggttgagaaagcaggcactgcaggacgccctggccctctacaagatgttcagcgaggcg
gatgcctgcgaggtgtggatcgatgagaaggagcagtggctcaacagtatggagatccca
gagaagctggaagacctagaggtcattcagcacaggttcgagagcctggagcctgagatg
aacaaccaggcgtcacgcgtcgctgttgtgaaccagatcgccaggcagctgatgcacaat
ggacaccccagtgagaagaacatcaaatcccagcaagataagctcaacaacagatggagc
cagttccgggatctggcggaccagaagaaggagtctctaatctcggcgctgggtgtgcag
aactaccacctggactgcaacgaaaccaagtcatggatccgcgagaagacaaaggtcatc
gagtccacccaggagctgggcaacgacctgacgggtgtcatggcgctgcagcgcaaactc
actggcatggagcgtgacctggctgccatcgaggacaagctgggcgacctgcgcggcgag
gcagagcggctggcctgcgaacacccggaccaggccaaggccatcaaggaccgcctggcc
aagatcaccgccgtgtgggaggagatgaaggccacactgcgtaatcgcgaggagtccctt
ggtgaggccagcaagctgcagcagttcctgcgcgagctggatgacttccagtcgtggctg
tcgcgcacacagaccgccgtcgcctcggaggagacgcccaacacgctggccgaggcagag
aagctgctagcgcagcacgagggcatcaagaacgagatccgcaactacgaggaggactac
cagaagatgcgcgacatgggcgagatggtgacccagggccagaccgatgcccagtacatg
ttcctgaggcagcggctacaggccctggacacgggctggaatgagctgcacaagatgtgg
gagaaccggcagaacctgctgttccagtcccacgcctaccagctgtttctcagggacacc
acgcaggccgaggccttcctcaacaaccaggagtacatgctggtccatacagagatggcc
actacgcttgagggggccgaaggagccatcaagcagcaggaggacttcatgaccaccatg
gacgccaacgaagagaagataaacggtgtggtggaggctggcaggcgactggcgagtgat
ggcaacatcaacgccgaccgcatccaggagagagtgacgtctgttgacgacaggcataag
aagaaccgcgaagctgctctggagctactgatgaggctgaaggataaccgggaccttcaa
aagttcctacaggattgccaggagctgtccctgtggatcaatgagaagatgctcacggcc
caggacatgtcgtacgacgaggccaggaacctccacagcaaatggctcaagcatcaggcc
ttcatggccgagctgcagtccaacaaggagtggctggacaaaattgagaaggatgggatg
cagctggtgttggagaagcctgagacagagtcggtggtcaaggagaagctctcagccctc
cagaagatgtgggaagtgttggagtccaccacccagaccaaagcccagtgcctgtttgac
gccaacaaggccgagctgttcacacagagctgtgccgacttggacaagtggctgggtggc
ctggagggccagattcaatcggatgactatggcaaagacctgaccagcgtcaacatcctg
ctcaagaagcagcagatattggagaaccaggtggaggtccgtcagagggaggtggtgcag
ctgcagagccaggcactggtcctcagccaggaagggaatgtcacagaggaggtggattgc
cagagacagatggtggagcacaaattcaaagagctgctcgacccgctgaggaagagaaag
aacttcctggtggcctcccgcgagatccaccagttcaaccgcgacgtggaggacgagata
ctttgggtcgaagagaggatgccaattgcaacctccacagagcatggtcacaacctacag
accgttcaactgcttatcaagaaaaatcagactttgcagaaggagattcagggacaccag
ccccgcttcgatgacattttcgagcggagcgagagcctgctgatggaggacagccttgcc
gtggaggccattcgccagcacctggccgacctgcaacagctgtggggtctgatgattgag
gagacagagaagcgtcacgcccgactggagcagtcccacaacgcccaaaagtactacttt
gatgccgccgaggctgaggcctggatgagcgagcaagagttgtacatgatggctgaggag
aaggccaaggatgagcagagctctgtagccatgctgaagaagcaccagattgtggaacag
tcggtggaggactacgctgagacagtccatcagctctccaagaccagcagaggcttgaca
gctgcaggacatccagagagtgagaggataggcatgcgtcagtctcaggtggacaagctc
tatgccggcatgaaggacctgtctgaggagaggcggggcaaactggatgagaggttccgc
ctgttccagctcaaccgcgaggttgacgacttggagcagtggattgccgagcgggaggtg
gtggccggatctcacgagctgggacaggactacgagcatgtcactatgctccaggagcgc
ttccgggagtttgcccgcgacacaggcaacatcggccaggagcgtgtagatgccgtcaac
cgcctgtccgacaagctgattaatgcgggccacgcagatgccgccacggtggctgagtgg
aaggacggcctcaacgaggcctgggctgacctgctggagctcatcgacacgcgcacgcag
atcctggctgcctcctacgagctacacaaattctaccacgacgccaaggagatcctgggc
cgcatcctggacaaacacaagaagcttcccgaggagttgggacgtgaccagaacacagtg
gagacattgcagcggatgcacaccaccttcgagcatgacatccaggccctgggaacacag
gtgaggcagctgcaggaggatgccgtccgcctccagtcggcctacgccggcgacaaggca
gacgacatccagcggagggagagcgaggtgctggaggcctggaatacactgctggaggcc
tgcgatgtccgcagagtccacctcctggacacgggcgacaaattccgcttcttcagcatg
gtgcgcgacctcatgctgtggatggaggacgtcatccgtctcatcgaagcccaggagaat
ccaagggacgtgtcctccgtggagttgttgatgaacaaccaccagggtatcaaggctgag
atcgacgcccgcaatgacagcttcaccgcctgcattgaactgggcaagtctctgctagcc
agaaagcactatgcatcagaggagatcaaagataaattactacagctgatggacaagagg
aaagacatgattgacaagtgggaggaccgacgggagtggttaagactaattttggaagtt
caccagtttgggagggatgcaggggtggcagaggcgtggctgctgggacaggaaccatac
ctattcggccgggagttggggcagagcgtggacgaagtggagaaactgatcaagaggcac
gaggcattcgagaagtcagccgctacttgggaggagcgcttctcagcgctggagaggttg
actacgttggagttattggaagtgagaagacagcaagaggaagaagagagaaggagaaaa
ccccctttgccggagcctttaccggtgcaggactcaccactgcagagtggggtagagaac
ggattgcagaacggactgccctcagaccaagattctccacagaatggcttggatagagtt
gagatcatgaatggagtggcggagcagaactcaaaggacccgagccccattccctcaccc
acagccagccggcagggcaagggcagcctgtcctccacgttgctgacccaaaaccactat
tcgcctgcggctcagatggagggcttcctgcatcgcaagcatgaatgggagggacacaac
aagaaggcctcaagcagatcctggcataacgtgtactgcgttatcaaaaatcaggaaatg
ggcttctacaaagacaacaagggtgctggtcaaggcatcccctaccataatgcgattccg
atcagtctaatgggggctgtgtgtgatgtggccatggactacaaaaaaaagaagcatgtc
ttcaaactcagagttgctgatggaaatgagtatctcttccaagccaaagaagaagaggag
atgagcacatggatccaggccattctgaatgcggggacacctgacaaggtatcgattacg
cccagcaaccagagcactccggcgtcgagccgagcccagaccctgcccgccaccgtcacc
ctcaccaccgaatccagcccgggcaagcgggagaaagacaaggaaaaggacaaggagaag
cgattcagcctctttggcaagaaaaaactataa
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