Salvelinus fontinalis (brook trout): 129839353
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Entry
129839353 CDS
T11136
Name
(RefSeq) keratin, type I cytoskeletal 13 isoform X1
KO
K07604
type I keratin, acidic
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
129839353
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sfon04812
]
129839353
04147 Exosome [BR:
sfon04147
]
129839353
Cytoskeleton proteins [BR:
sfon04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
129839353
Exosome [BR:
sfon04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
129839353
Exosomal proteins of other body fluids (saliva and urine)
129839353
Exosomal proteins of colorectal cancer cells
129839353
Exosomal proteins of melanoma cells
129839353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
CCDC39
ADIP
ATG16
AIF-1
DUF2461
YabA
RelA_AH_RIS
CENP-F_leu_zip
TPR_MLP1_2
Nuf2_DHR10-like
DUF1664
Motif
Other DBs
NCBI-GeneID:
129839353
NCBI-ProteinID:
XP_055762710
LinkDB
All DBs
Position
40:20307761..20316447
Genome browser
AA seq
493 aa
AA seq
DB search
MSFSRSSMSYSSSGGGGGTMSMRSGGGGGMGMGSSRFSSMGGGGGGGGSMRSGSVYGGAG
GSGVRISSSSFGSGGGGGGGGYGFGMGGGGGGGGGFGMGGGGGGGGADMNVSANEKATMQ
NLNDRLSTYLEKVRKLEAANAELELKIRQFMESKTSPSSRDYSAFYATIADLQDKIQAAT
RVNGGIYLSIDNAKLAADDFRTKYENELAMRQSVEADIAGLKRMLDEMTMARSDLEMQIE
GLKEELIYLKKNHEEELLAMRTQMTGQINVEVDAAPQEDLSKVMAEIREQYESANAKNQR
DLEAWFQTKTETLNKEVASSTEVLQTSKSEISEIRRTLQALEIELQSQQSMKGSLENTLA
ETEGRYSMQLGRLQNQVTSLEEQLVSLRSDMERQGQEYKMLLDIKTRLEMEIAEYRRLLD
GEAGGLGGSSSKTSQKSSSSSSSGVSSSVSSSSVSSSSTVPTSTTSTTRKVVIVTEEIVD
GKVVSTSETKHTT
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtccttctctagatctagcatgtcctacagcagcagcggtggtggaggtggcaccatg
tccatgaggtctggaggtggaggtggaatgggtatgggctcctcacgcttctcctcgatg
ggtggtggtggtggtggaggaggttccatgaggtccggcagtgtgtatggaggtgcagga
ggctctggggtgcgcatctctagctcctcgtttggttccggcggcggaggtggtggtggc
ggttatggtttcggaatgggagggggtggtggcggaggaggcggtttcggcatgggaggt
ggtggtggcggcggtggagctgacatgaatgtgtcagccaacgagaaggccacaatgcag
aacctgaacgaccgcctgtccacctacttggagaaggtgcgcaagctagaggcggccaac
gccgagctggagctgaagatccgtcagttcatggagagcaagacgtctcctagctctcgt
gactactctgccttctacgccaccatcgccgacctgcaggacaagatccaggctgccact
cgcgtaaacggaggcatctatctcagcattgacaacgcaaagctcgctgcagatgacttc
agaaccaagtatgagaacgagctggccatgcgtcagtcggtggaggcggacatcgccggg
ctgaagaggatgctggacgagatgaccatggccagatctgacctggagatgcagatcgag
gggctgaaggaggagctcatctatctcaagaagaaccatgaggaggagctgctggccatg
aggacacagatgactggacagatcaacgtggaggtggacgcagcaccacaggaggacctg
tccaaagtcatggctgagatccgtgagcagtacgagtccgctaatgccaagaaccagcgc
gatctggaggcttggttccagaccaagacagagacgttgaacaaggaggtggcgtccagc
acagaggttctccagacctccaagtcagagatttcagagatccgtcgcacactgcaggcc
ctggaaatcgaactgcagtcacagcaaagcatgaaaggctccctggagaacacgctggcg
gagacggagggccgttactccatgcagctgggacgcctccagaaccaagtgaccagtctg
gaagagcagctagtgtctctccgcagcgacatggaacgccagggccaggagtacaagatg
ctgctggacatcaagacacgcctggagatggagatcgctgagtacaggaggctgctggac
ggagaggctggcggcctcggcggcagctcctcgaaaaccagccaaaaatcctccagctcc
tcgagctccggtgttagttccagtgtcagcagctccagtgtcagctcctccagtaccgtc
cccacctccaccacctccaccacacgtaaggtggtgatcgtcacggaggaaatagtggat
ggcaaggttgtctccacaagtgaaaccaaacacaccacataa
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