Salvelinus fontinalis (brook trout): 129839417
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Entry
129839417 CDS
T11136
Name
(RefSeq) homeobox protein MSH-C-like
KO
K09341
homeobox protein MSX
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129839417
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
129839417
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
DUF7645
Motif
Other DBs
NCBI-GeneID:
129839417
NCBI-ProteinID:
XP_055762829
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Position
40:16744145..16746863
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AA seq
283 aa
AA seq
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MAPYPFEMNPVGLPGSPSHDIKLHQKEVSDTECEELQPKDMTTDKGYKSKTSSLPFSVES
LISKKTTCRTYYSSPSSDSGLLQPKPVAAAVQITEQFSPRTFYVERKVSPESSQSVSDCQ
NDDNQDFCEKDQSTWFQTTSFSTPPRSLSPPPCPLRKHKNNRKPRTPFTTSQLLALERKF
RQKQYLSIAERAEFSNSLNLTETQVKIWFQNRRAKAKRLQEAELEKYKLASKPMLPAFAL
PFPLGAHMGSPSLYGHSNAYPRPTLPVPGLFGGPVAYGMYYLS
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggccccgtacccctttgagatgaatcccgttggcctaccggggtctccgtcccacgat
attaaactccaccagaaagaagtgtcggatacggagtgtgaggaacttcaacccaaagat
atgacaaccgacaaaggatacaaaagtaagacgagcagtcttccattcagcgtcgaatca
ttgatttccaagaaaacaacctgcaggacttactattcttctccctcctcggattcgggt
ctccttcaaccgaagcctgtggcggcggcggtgcagatcacggaacagttttctccaagg
actttttacgtggagaggaaagtttccccggaaagctcgcagagcgtgtcggactgtcag
aatgacgacaatcaagatttttgtgagaaagaccagagcacttggttccagacaacatct
ttctcgactccccctcgaagcttaagtccacctccatgtcctttaaggaaacataaaaac
aaccgaaaacctcgaacgcccttcactacctcccagctgctcgctctggaaaggaagttc
cgacaaaagcagtacctctccattgcggagcgagccgaattctccaactccctcaatttg
accgagacccaggtcaaaatctggttccaaaacaggagggctaaagccaagagacttcag
gaggccgagttggaaaagtacaaactggcgtcgaaacccatgctacctgcctttgctctg
cctttccccctgggagcgcacatgggctctccatctctctacggacattctaacgcctac
cccaggcccactttacctgttccgggactcttcggtggacctgtcgcctatggaatgtat
tatttgtcttga
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