Salvelinus fontinalis (brook trout): 129839444
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Entry
129839444 CDS
T11136
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfon04121
]
129839444
Enzymes [BR:
sfon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129839444
Ubiquitin system [BR:
sfon04121
]
Ubiquitin ligases (E3)
U-box type E3
129839444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
129839444
NCBI-ProteinID:
XP_055762888
LinkDB
All DBs
Position
40:complement(1947617..1986241)
Genome browser
AA seq
1703 aa
AA seq
DB search
MQMDKSIEAPKPVRTSKGIPQSFMVKAEPGTKGAMLTSTGEYAIPAIDAEAYALGKKERP
PFVPREASSSEDEADPIPDELLCPICNDLMSDAVVIPCCGNSYCDDCIRTSLLDSEEHTC
FTCKQSDVSPDALIANKFLRQAVNNFKNESGYTKPARNKTLQQSAPPPARPQPFRTLGSR
QQDPLLANSRQQDPLLASARQQDPLLASARQQDPLLASARQQDPLLASARQQDPLLANAR
QQDPLLANARQQDPLLANARQQDPLLANARQQDPLSTNARQQDPLLVNTSRPPASLTPPV
TLTQSLPIQTPPIGPPEVSISPDPTPEPHRAEPRHLANHNEPPPPGEMEAGPYMISEPPI
RSADSGPQGYHMPMIGHPPPIRPSHPSGPPPQPSHSHRGGPRPPWDRPYRPLSDHVQPPH
HPPPSAPGPAPHLYPGPNLYHPPPNPHSIPPQSYPPPYSTGPPPPVNYPPQSLYQHGQMP
PGVNAPWVPPPNTQPLSLGPPPLLPSGPPLSKEDFYRQRRLRQDQVTSKLDEFTKDFAKE
LMEYRPAPKRRRRSYSRSRSYSRSPFSRSPYSRSRSPRSRSRSYSYTPSRSRSRSRSYGR
SPFSRRNGGRGGRSRSYGRSPRSRSRSRSYGYRRSGSPRSPPPYRGGGGGGGGGGGGWEG
GDGAEGGGGYRPRSRSPGGYRRSRSPGGVRGHHKPPPREPPPYEHKGGPDLSPGGRERWE
RDSYRQWEKEYRDWYNKYYKDYSTQHASVHHRGGRGSRERDRLSPPPRDYSPQGRVRRGE
RGGPPGPHRTHHALSALPSASVRGNGSKERTQGDASKERTQGGTKTSEGGTKTLKGKKLK
KKKNGEELDSANQSLDRGDATPVRDEPMDELHTLTPSKAPPTSTKVSTNKAALLSGKTPP
TSSSQSEKSRKEKGGKVKVKTEGKVKGEKVKRKTGGEATVTASKNKESSATKSTKASKVK
SDEPIKREKGRSTPTVRGSLAKLPLPRPLPPHPHDLPKHLGDPRGGRRDPIHGVGVRLPG
RPLQPAPPSPAEKRRRVEERERGRGMDRGMGGPPAKLRRAEGPYPQRGLPAKPHLLLNLA
CRETGRGEGLLPIPGTSQTGRLDRFHPISISIPGPGSSMDLGREGRGDGLLPTPGSSEAG
RRESDRGSIWPLMGLQVKPFPQRRIKLNRDLGRNSTMSRPEERPAPATNITTTTITTTGE
RPAAPERGAAERDGGMERVAVMVERRSSGERSEVRSVRSERPSSGERLPERGGGGRSVSL
DRMTIAERSAIAKKPDVTRERTESEYTPPTERERPAESSKERERPASAKTDRSSSRERSA
TREQKGERGGEKTSSSVDRPASTGERAAGTQRETVAEDRAAAAAVKEGSGSGKTRKISRK
SSEPTVHHSSDHSVTSTGSSRAVEERSEPGQSQGAVSKPRDLQTQRRPSPVQFPSPGRER
DRGTGGVLIQPPPRSKWEREEEEEEEEQHSASRENGALAVSSSVPRDALRREASPAPPSG
QGREVQGSVSKTANTEGRRGKEEGTRRREEGRGLKKGQVNFRKPAKTESRGVKEEGRGGA
GREESRGAGLEPRRQRLCSDLGRETDEAAFVPDYSEGEGSDGERGSGLSHSPSHNTQSPA
SQSPGGSPSNHSGSTATDKKKKKKHKKHKKHKKHKKHSADAEPPAEGRKEHKHKNKKKKH
RKNKEEEGGGEAEEKTGQESTTI
NT seq
5112 nt
NT seq
+upstream
nt +downstream
nt
atgcagatggataagagtatagaggcccctaagccagtcaggaccagtaaggggatccct
cagagctttatggtgaaggctgaaccaggaactaaaggagccatgttgaccagcactgga
gaatatgctattcctgctatagacgcggaggcctatgctctgggtaagaaggaacgtccc
ccctttgttcctcgtgaagcgtcatcgtctgaagatgaggctgatccaatccctgatgag
ctgctctgccccatctgtaacgacctgatgagtgatgctgttgtcataccctgctgtggt
aactcctactgcgacgactgtatcaggaccagtctgctggactcagaggaacacacctgt
ttcacctgcaaacagtctgacgtctcacctgacgctctcatcgctaacaagttcctacga
caggcagtgaataactttaagaatgaatctggttacaccaaaccagcacgaaacaaaacc
ctgcagcagtctgccccgcccccagcacggcctcagccattcagaaccctcggctcacgc
cagcaggaccccctattggccaacagtcgccagcaggaccccctattggccagcgctcgc
cagcaggaccccctattggccagcgctcgccagcaggaccccctattggccagcgctcgc
cagcaggaccccctattggccagcgctcgccagcaggaccccctattggccaacgctcgc
cagcaggaccccctattggccaacgctcgccagcaggaccccctattggccaacgctcgc
cagcaggaccccctattggccaacgctcgccagcaggaccccttatcgaccaacgctcgc
cagcaggaccccctattggttaacacctctcgccccccagcctccctcactcctcctgtc
accctgacacaaagcctgcccattcagaccccaccgattggaccgcctgaggtgtcaatc
tctcctgaccccacaccagaaccacaccgggcggagccacggcacttggccaatcacaac
gagccgccgccgccaggtgagatggaggcggggccttacatgatatcagagccaccaatc
agatcagccgacagcggacctcagggataccacatgcctatgattggtcaccctccaccc
ataaggccctcccacccatcaggtccacctccacagccctcccattcccacagaggagga
cccagaccaccttgggacagaccctacagacctctttctgaccacgttcaacccccacac
cacccccctccttctgccccgggcccagcccctcacctctacccgggccctaacctctac
caccctccccccaatccccactccatccctccccagtcctacccccctccctactccacc
ggaccccctccccctgttaactaccccccccagtccctctatcaacacggccagatgcct
ccgggggttaatgccccctgggttccccctcccaacacccagcccctctcgctgggcccc
ccacccctcctaccctccggaccccccctctccaaggaggacttctacagacagaggaga
ctccgacaggaccaggtaacgtccaagctggatgagttcactaaagactttgccaaagag
ctgatggaatacagacctgctcccaagagacggagacgctcctactccaggtctcgttcc
tacagtcgttctcctttcagccgttccccctactcccgatcccgttctcctcgctctcgc
tccaggtcttactcgtacacccccagccgctcccgctcacgttccaggtcttacggacgc
tcccccttctccagacgcaacggaggccgggggggacgcagccgctcctacggccgctcg
ccacggtcccgctcacgctcccgttcctacggctaccgtcgctccggctctcctcgctcc
cctccgccttaccgaggtggtggtggtggtggtggtggtggtggggggggctgggaagga
ggagacggagctgaaggaggaggggggtatcggcccaggtctcgctccccggggggctac
aggaggagcaggagtccaggaggggttagaggtcaccataagcccccccctcgagagccg
cctccttacgagcataaaggtggacctgacctgtctcccgggggcagggagcgctgggag
agagatagctacagacagtgggagaaagagtacagggactggtacaacaagtactacaaa
gactacagtacccagcatgcctctgtgcaccaccgcggtggccggggcagcagagagagg
gaccgcctctcccctccacccagagactactccccccaggggcgggtgaggaggggtgag
agagggggacctcccggaccccacagaactcaccacgccttgtccgctctgccctctgcc
tccgtcagggggaatggaagtaaggagcgcacgcagggggacgctagtaaagagcgcacg
caggggggaaccaaaacgtcagagggtggaactaaaactctgaaagggaagaaactgaag
aagaagaagaacggggaggagctggattcagccaaccaatcactggacaggggtgatgcc
acacccgtcagggacgagccaatggatgaactccacaccctgacccctagcaaagcccca
cccacctccaccaaggtctcgaccaataaggcagcgctgctgtctggtaaaacccctccc
acctcttccagccagtcagagaagagcaggaaggagaaggggggcaaggtgaaagtaaag
acggaaggcaaggtgaaaggagagaaggttaagagaaagacaggaggagaggcgacggtc
acggcctctaagaacaaagagtcttcagccaccaaatcaaccaaagcgtctaaggtcaaa
tcagacgagccaatcaagagagagaaggggcgtagcacccctactgttagaggaagtttg
gctaaactccccctgccccgccccctcccccctcacccccacgacctccctaaacacctg
ggtgacccccgcgggggaaggagagaccccattcacggtgtcggggtacgcctccctggt
cgccccctccagcctgcacctccctccccagcagagaagaggaggagagtggaggagagg
gaaagggggagggggatggacagagggatggggggccccccggctaagctgcgccgtgcc
gaggggccgtacccccagagaggacttccagccaagcctcacctcctcctgaacctggca
tgcagagagacgggtagaggagagggtctgctccccatccctggaacctcgcagacaggg
aggctagatcgtttccatcccatctccatctccatccctgggcctggttcctccatggac
ctggggagagaggggagaggcgacgggctgctgcccaccccagggagctctgaggcgggc
agaagagagagtgacagggggtctatctggcctctcatgggtctgcaggtcaaacccttc
ccccagaggagaatcaaactgaacagagacctagggaggaacagcactatgtcccgccca
gaggagagaccagctccagctactaatatcaccactactactatcaccactactggagag
agaccggctgctcccgagagaggagcagcagagagggatggagggatggagagggtggcg
gtgatggtggagcggaggtcgtctggcgagaggtcagaggtcaggtctgttaggtcagag
aggccgtcgtcgggggaacgtttgccggagagaggaggaggaggaaggtcagtctctcta
gaccgcatgaccatcgcggaacgctcagccatcgctaagaaacctgacgtcaccagggag
agaacagagagcgagtacactccgcccactgagagagagagaccagctgagagctccaag
gagagagagagaccagcgtcagccaagacagacaggtcatcatccagggagaggtcagcc
accagggaacagaaaggagagcgaggaggagagaagacctcgtcctccgtagacagacct
gcctctacaggagagcgagcggcagggacccagagagagactgtagctgaagacagagca
gcagcagcagcggtgaaggagggttctggttctgggaagaccagaaagatcagcagaaag
agttctgagcccacggtccaccactcatcagaccactctgtcacttcaactggcagcagc
agggctgtagaggagaggtctgagccgggccagagccagggtgccgtgtctaaaccccgg
gacctccagacccagaggagacccagtcccgtccagttccccagcccaggcagggagagg
gaccgtgggaccggaggagtcctcatccagcctccaccccggtccaagtgggagagagag
gaggaggaggaggaagaggagcagcactcagcgtccagggagaacggggcgttggcggtt
tcctcctccgtgcccagagacgctctgaggagagaagcctcaccagcaccacctagtggc
caaggcagagaggtgcagggtagtgtctctaaaacagccaacacagaggggaggagaggg
aaggaggaggggactaggaggagggaggaaggcagagggcttaaaaaggggcaggtgaac
tttagaaaaccagctaagaccgaatccagaggggtgaaggaggaaggaagaggaggggca
gggagggaggagagtcgaggggcggggctagagccaaggcgacagcgtctgtgttctgac
ctgggtagagagacggacgaggcagccttcgtccccgactacagcgaaggggaggggtca
gacggggagagaggcagtggcctgagccatagcccctctcacaacacccagagccccgcc
tcccagagccccggcggctcccctagcaaccacagcggctccacggcgacggacaagaag
aagaagaagaaacacaagaaacataaaaaacacaagaagcacaagaagcattctgccgac
gctgagcctcccgccgaaggaaggaaggaacacaaacacaagaacaagaagaagaagcac
aggaagaataaggaggaggagggaggaggggaggcagaggagaagactgggcaggagtca
accaccatctga
DBGET
integrated database retrieval system
