Salvelinus fontinalis (brook trout): 129839477
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Entry
129839477 CDS
T11136
Name
(RefSeq) serine/arginine-rich splicing factor 7-like isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03040
Spliceosome
sfon05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129839477
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129839477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfon03041
]
129839477
Spliceosome [BR:
sfon03041
]
Common components
Common spliceosomal components
SR proteins
129839477
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
RRM_5
zf-CCHC_5
zf-CCHC_3
SET_assoc
Motif
Other DBs
NCBI-GeneID:
129839477
NCBI-ProteinID:
XP_055762936
LinkDB
All DBs
Position
3:13756873..13772300
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AA seq
246 aa
AA seq
DB search
MSHIPTCKRTNHMDNRENSKIYVGNLGTGAGKGELERAFGYYGPLRTVWIARNPPGFAFV
EFEDTRDAEDAVRGLDGKLISGSRVRVELSTGMPRRSRYERAPTNRPFDSNDKCYECGER
GHYAYDCHRYGRRRRTRSRSHSRSGGRRYSRSRSRGRGRRSRSFSPRRSRSPRRSRAFTP
KRSRSRSKSRSRSRSLSHAKTRSGSVGRSKSGSPTRSCSKSKASPQKLSHSTSRSPRRNG
SSERDD
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacatccctacctgcaaaaggaccaaccacatggacaaccgggaaaactctaag
atttacgtcggtaacctgggcactggtgcagggaaaggagagctagagcgggcattcggg
tattacggacctttaagaacagtgtggatcgctaggaaccccccgggctttgcctttgtg
gagtttgaagacacccgggatgcagaagatgcggtccgaggccttgacggcaagttgatt
tctggatctcgagttcgagttgaattatctacagggatgccgcggcgatctcggtacgag
cgtgcgcccaccaaccggccctttgactccaacgacaagtgctatgagtgtggtgagcgg
gggcactatgcctacgactgccaccgctacggtcgacgcaggaggaccaggtcccggtct
cactccaggtccggtgggaggaggtactctcgctctcgcagccggggccgtggcaggaga
tcaagatccttctctccacgccgctctcgttctcctagaagatctagagcctttaccccc
aagagatcaagatctcgatcaaagtccagatcaaggtctaggtcactttctcatgcaaag
accaggtctggttctgtgggcagatccaagtctggttcccccacgaggagctgttcaaaa
tctaaagcttcacctcaaaaactaagccactctacctcgaggagtcctcgtcgaaatggc
agctcggagagggacgactga
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