Salvelinus fontinalis (brook trout): 129839582
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Entry
129839582 CDS
T11136
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
129839582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfon04121
]
129839582
Enzymes [BR:
sfon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129839582
Ubiquitin system [BR:
sfon04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129839582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-RING_2
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4
zf-B_box
zf-C3HC4_4
zf-RING_5
ANCHR-like_BBOX
U-box
Elf4
Motif
Other DBs
NCBI-GeneID:
129839582
NCBI-ProteinID:
XP_055763087
LinkDB
All DBs
Position
40:22262225..22276514
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AA seq
658 aa
AA seq
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MAEDLFSLMSLEDELSCSICLCAFDCPVTIPCGHNFCQECLLETWKDNYSCPQCRTHFTT
KPELKKNTVLSTVVETFKMKSNKSDLPSETGDLIMWDAVKMEPKEAVILCDTCMEAKAFK
TCLTCMASFCLEHVRPHHENPVFGAHQLNEPLGDLRDRICPDHHKLMEFYCVQHGHCICG
FCLQQVHKGCTFSNPDEQRALQESDLRGKLSLLEGKMDKNQMVISQMSDQQSKFKDSAAS
RKRALEDEYRQIRALLDRDEREALNTVDREHESGQTKLQNLIKKFNQNIAKLSAAKDGIN
SLLSQTQTMAFLQASVDMPAAVAFDPYTPKVNLDSKAVAAWHAYSAVLREHLTHVLRQPV
EVRLQILQPAQRFGPPLMPNIFEMGGMPPQGHPRMPRSHSPGAPLRANQRKKPPQDSNRE
RKNPQKPPNAPKEFATPVPHTPRDHPKEQSAEPIPKNKEDPGQPSVPPSITSAAKRNDLL
QYGTVLTLDPKTAHKRISLTENMTVASVSDEPTHYPDCPARFSVCSQVLTSKGFSRGRHY
WEVKMSSNNFTGIGLAYNSIDRKGPASRLGRNTQSWCVEWFNVKLSAWHASSETVLQNPN
PTRVGVLLDCEEGTATFYNIQERAYPFHTFVFQFAEAVYPAFWLFSSGSSVSLCKLQS
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggatctgttttccctcatgagtctcgaagacgaactgagctgtagcatctgc
ctctgtgctttcgactgtccggtgacaattccatgtggacacaacttttgccaagagtgt
ctcctagaaacctggaaagacaactacagctgtccacaatgccggacccacttcaccacc
aaaccagagctgaagaagaacaccgtcctcagcactgttgtggaaacgttcaaaatgaag
tcgaataaaagcgacctccccagtgagacgggcgacttaatcatgtgggatgcggtcaag
atggagcccaaagaggcggttatcttgtgcgacacctgtatggaagccaaagcattcaag
acctgcctcacctgtatggcgtcgttctgccttgagcacgtgaggcctcatcatgagaac
ccagtgtttggcgcgcatcagctgaacgagcctctgggcgacctgcgcgaccgtatctgc
cccgaccaccacaagctgatggagttctactgtgtccaacatggccactgtatctgtggt
ttctgtctgcagcaggtgcataaaggctgtaccttctccaaccctgatgaacaacgggca
ctgcaagagtctgatttgaggggcaagttgagtctgctggaaggaaagatggacaagaac
cagatggtcatctctcagatgagtgaccagcagagcaagtttaaggactctgcagccagc
aggaagagagctctggaggacgagtaccgccaaatccgggcgctgctggaccgtgacgag
cgtgaggctctgaacactgtggaccgcgagcacgagagcggtcagaccaaactccagaac
ctcataaagaagttcaaccagaacattgcgaagcttagcgcagcaaaagatggcatcaac
agcctgctcagtcagactcagaccatggctttcctacaggcctcagttgacatgccggca
gcggtggcctttgacccctataccccgaaggtcaacttggactctaaggccgtggcagcc
tggcatgcctactctgcagtcctgagggagcatctcacacatgtactgagacagcctgta
gaggtcagactgcagatactccaaccagctcagaggtttggtcctcctctgatgccaaac
atctttgaaatgggaggcatgccaccacaaggtcatccgagaatgcctagatcccacagc
ccaggagcccccctcagggcaaaccagaggaagaagcctccacaagattcaaaccgagag
agaaaaaatccccaaaagccacctaatgctcccaaagagttcgccactcctgttccacac
acaccaagggaccaccccaaagaacaatcagcagaacccatacccaagaacaaggaggac
ccaggacaaccaagtgttcccccaagtatcacgtctgcagcaaaacgaaatgaccttcta
caatatggcacggttctcacccttgaccccaaaacggcccacaagcgcatctccctcaca
gagaacatgaccgtggcctctgtgtcagacgagcccacccattaccccgattgccccgcc
cgcttctctgtctgcagccaggtgctcacttccaagggcttctcccgcggccgccactac
tgggaggtcaagatgagtagcaacaacttcaccggcatcggcctggcctacaacagcatc
gaccggaagggtccggctagccggctggggcgtaacacccagtcctggtgcgtggagtgg
ttcaacgtcaagctgtcggcctggcacgccagcagtgagactgtactgcagaacccgaat
ccgacccgcgtcggcgtgctgctggattgcgaagagggaacggccacgttctataacata
caggaacgggcataccctttccatacgtttgtgttccagttcgccgaggcagtgtacccg
gcgttctggctcttttccagcggctcgtctgttagcctgtgcaagctgcagtcttaa
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