Salvelinus fontinalis (brook trout): 129839584
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Entry
129839584 CDS
T11136
Symbol
samd1b
Name
(RefSeq) atherin isoform X1
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfon03036
]
129839584 (samd1b)
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
129839584 (samd1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAMD1_SHD
SAMD1_WH
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
129839584
NCBI-ProteinID:
XP_055763090
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Position
40:7247509..7254390
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AA seq
670 aa
AA seq
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MSESKYRDWILETIDSLRSRKARPDLERICRMVRRRHGSDPDRTREELEKLIQEQTVLKV
SYKGSISYRNAAKVQRKSRKKSDFTPGNGGGSEVEGEKAIHSSLNNNGDSAHSFTDLEEV
ESRDREEDSVSEPSEYPDPRPETPGLTSEEKQKLFPLNSGNGPGCCPGCGETGCAETGCA
AGRGCSGKASASKDKRLGERGGGGGQEGGGSSPLAGNHETKPGQDGSGAPSKAKGVCGGA
GGVETTGQEGSSSCVGVAAETEHKICQGSASSSSSSNSHLMRPKQLQPASPLVKPKLRAG
RCEGNPWVGGSGQTSSDLGERLIASVRRLAEQNRASALRGETRGGHKPLGLKEILGYLTS
QDGLSSGGKLTRNRVKVVLEREVARGRLRRTRCGNITLPVRGVEAAPAKPTGPANRLLKS
ALQDKHIGKKEVKEEEPMEPESGEEEEDEEEKGTGDAEDGGKSDTQASGGEEGSKGVTCP
APVPMETEPRNGDDIAGGSEGQAGVKQEDKQLEHTTNTVSPDQIHTTTQNQNVAQSERES
HTSSVHNHNSGSAYKTEVGVSSCLLTPTASPRDSGLAEERGMNGGVFVKSELGSLNPVNW
TVSDVVSYFTSAGFPEQALAFRTQEIDGKSLLLMQRNDVLTGLSIRLGPALKIYERHVKV
LQRTHFEEDD
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaatccaagtaccgggactggatcctcgagaccatagactctctacgctcacgg
aaagcccgaccggaccttgagagaatatgtcgtatggtccggagaagacacggctcggat
ccagacagaacccgggaggaactggagaaactgatccaagagcaaacagtgctcaaagtt
agctacaagggctccatatcctacaggaatgcggcgaaggtgcagagaaagagtcgaaag
aagagtgacttcacgccgggtaacggcggcggtagcgaggtggagggagagaaagccata
cactccagtttgaacaacaacggggacagcgcgcacagctttaccgacctagaggaggtg
gagagccgggaccgagaggaggattctgtctccgagccgagtgagtacccagacccccgg
cccgaaaccccgggtctcacctccgaggaaaaacaaaagctttttccactgaatagcgga
aacggccctggctgttgcccgggttgtggcgaaacgggctgtgctgaaacgggctgtgct
gccgggagaggctgcagtgggaaagcaagtgcgtcaaaagacaagagattaggagaaagg
ggaggaggaggagggcaggaggggggtggcagcagccctttggccggcaaccacgaaaca
aaaccgggccaagatgggagcggcgctccgagcaaagcaaagggggtctgtggtggcgca
gggggggtggagacgacggggcaggagggcagcagtagctgcgttggtgttgctgctgaa
acggaacataaaatctgccagggaagcgccagttcaagttccagcagcaacagccacctc
atgcggccgaaacagcttcagccagcatccccacttgtcaaacccaaactccgggccggc
cgatgtgaggggaacccgtgggtcgggggcagcgggcagaccagctcggatttgggcgaa
agactgatcgcctccgtccgcagactagccgagcagaaccgagcctccgcgttaagaggg
gagacccgcgggggccacaagcccctgggactgaaggagatcctgggctacctgaccagc
caagacggcctctcatctgggggtaagctgacccgtaacagggtcaaggtggttctggag
agagaggtggcgagaggtcggctgcggaggacccggtgtgggaacatcactctcccggtg
aggggagtggaggcagcccccgcgaagccaaccggccccgctaacagactgcttaagagc
gcactgcaggataagcacattgggaaaaaggaggtgaaagaggaggagccaatggagcca
gagagtggagaggaggaggaggatgaagaggagaagggaacaggggatgctgaggatggg
ggaaagagtgacacccaagcctcagggggtgaggagggttctaagggggtgacttgccct
gccccggttcccatggaaacggaacccaggaatggtgatgacatcgctggaggttctgag
ggacaggcgggggtgaagcaggaggacaaacaactagaacacacaaccaatactgtctct
ccagaccagatacacacaaccacacagaatcagaatgtggcgcagtcagagcgagagagc
cacacttcctctgtccacaaccacaactcaggttcggcctataagacagaggtgggtgtg
tcctcctgtctcctcacccccaccgcctcacccagagactctggtctggcagaggagaga
gggatgaacggaggagtgtttgtgaagtctgagctgggcagtctaaacccagtcaactgg
acagtgtctgacgtggtcagttatttcacgtcagcagggtttccagaacaggccttagcc
ttcaggactcaggagatagatgggaagtccctcctcctgatgcagcgtaacgatgtcctg
acaggcctgtcaatcaggctaggccccgccctgaagatctatgagcgccatgtgaaggtt
ctgcagagaacacactttgaagaggacgactga
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