KEGG   Salvelinus fontinalis (brook trout): 129839584
Entry
129839584         CDS       T11136                                 
Symbol
samd1b
Name
(RefSeq) atherin isoform X1
  KO
K26266  sterile alpha motif domain-containing protein 1
Organism
sfon  Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:sfon00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sfon03036]
    129839584 (samd1b)
Chromosome and associated proteins [BR:sfon03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Other PRC associated proteins
     129839584 (samd1b)
SSDB
Motif
Pfam: SAMD1_SHD SAMD1_WH SAM_1 SAM_2 SAM_PNT
Other DBs
NCBI-GeneID: 129839584
NCBI-ProteinID: XP_055763090
LinkDB
Position
40:7247509..7254390
AA seq 670 aa
MSESKYRDWILETIDSLRSRKARPDLERICRMVRRRHGSDPDRTREELEKLIQEQTVLKV
SYKGSISYRNAAKVQRKSRKKSDFTPGNGGGSEVEGEKAIHSSLNNNGDSAHSFTDLEEV
ESRDREEDSVSEPSEYPDPRPETPGLTSEEKQKLFPLNSGNGPGCCPGCGETGCAETGCA
AGRGCSGKASASKDKRLGERGGGGGQEGGGSSPLAGNHETKPGQDGSGAPSKAKGVCGGA
GGVETTGQEGSSSCVGVAAETEHKICQGSASSSSSSNSHLMRPKQLQPASPLVKPKLRAG
RCEGNPWVGGSGQTSSDLGERLIASVRRLAEQNRASALRGETRGGHKPLGLKEILGYLTS
QDGLSSGGKLTRNRVKVVLEREVARGRLRRTRCGNITLPVRGVEAAPAKPTGPANRLLKS
ALQDKHIGKKEVKEEEPMEPESGEEEEDEEEKGTGDAEDGGKSDTQASGGEEGSKGVTCP
APVPMETEPRNGDDIAGGSEGQAGVKQEDKQLEHTTNTVSPDQIHTTTQNQNVAQSERES
HTSSVHNHNSGSAYKTEVGVSSCLLTPTASPRDSGLAEERGMNGGVFVKSELGSLNPVNW
TVSDVVSYFTSAGFPEQALAFRTQEIDGKSLLLMQRNDVLTGLSIRLGPALKIYERHVKV
LQRTHFEEDD
NT seq 2013 nt   +upstreamnt  +downstreamnt
atgtccgaatccaagtaccgggactggatcctcgagaccatagactctctacgctcacgg
aaagcccgaccggaccttgagagaatatgtcgtatggtccggagaagacacggctcggat
ccagacagaacccgggaggaactggagaaactgatccaagagcaaacagtgctcaaagtt
agctacaagggctccatatcctacaggaatgcggcgaaggtgcagagaaagagtcgaaag
aagagtgacttcacgccgggtaacggcggcggtagcgaggtggagggagagaaagccata
cactccagtttgaacaacaacggggacagcgcgcacagctttaccgacctagaggaggtg
gagagccgggaccgagaggaggattctgtctccgagccgagtgagtacccagacccccgg
cccgaaaccccgggtctcacctccgaggaaaaacaaaagctttttccactgaatagcgga
aacggccctggctgttgcccgggttgtggcgaaacgggctgtgctgaaacgggctgtgct
gccgggagaggctgcagtgggaaagcaagtgcgtcaaaagacaagagattaggagaaagg
ggaggaggaggagggcaggaggggggtggcagcagccctttggccggcaaccacgaaaca
aaaccgggccaagatgggagcggcgctccgagcaaagcaaagggggtctgtggtggcgca
gggggggtggagacgacggggcaggagggcagcagtagctgcgttggtgttgctgctgaa
acggaacataaaatctgccagggaagcgccagttcaagttccagcagcaacagccacctc
atgcggccgaaacagcttcagccagcatccccacttgtcaaacccaaactccgggccggc
cgatgtgaggggaacccgtgggtcgggggcagcgggcagaccagctcggatttgggcgaa
agactgatcgcctccgtccgcagactagccgagcagaaccgagcctccgcgttaagaggg
gagacccgcgggggccacaagcccctgggactgaaggagatcctgggctacctgaccagc
caagacggcctctcatctgggggtaagctgacccgtaacagggtcaaggtggttctggag
agagaggtggcgagaggtcggctgcggaggacccggtgtgggaacatcactctcccggtg
aggggagtggaggcagcccccgcgaagccaaccggccccgctaacagactgcttaagagc
gcactgcaggataagcacattgggaaaaaggaggtgaaagaggaggagccaatggagcca
gagagtggagaggaggaggaggatgaagaggagaagggaacaggggatgctgaggatggg
ggaaagagtgacacccaagcctcagggggtgaggagggttctaagggggtgacttgccct
gccccggttcccatggaaacggaacccaggaatggtgatgacatcgctggaggttctgag
ggacaggcgggggtgaagcaggaggacaaacaactagaacacacaaccaatactgtctct
ccagaccagatacacacaaccacacagaatcagaatgtggcgcagtcagagcgagagagc
cacacttcctctgtccacaaccacaactcaggttcggcctataagacagaggtgggtgtg
tcctcctgtctcctcacccccaccgcctcacccagagactctggtctggcagaggagaga
gggatgaacggaggagtgtttgtgaagtctgagctgggcagtctaaacccagtcaactgg
acagtgtctgacgtggtcagttatttcacgtcagcagggtttccagaacaggccttagcc
ttcaggactcaggagatagatgggaagtccctcctcctgatgcagcgtaacgatgtcctg
acaggcctgtcaatcaggctaggccccgccctgaagatctatgagcgccatgtgaaggtt
ctgcagagaacacactttgaagaggacgactga

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