Salvelinus fontinalis (brook trout): 129839784
Help
Entry
129839784 CDS
T11136
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129839784
Membrane trafficking [BR:
sfon04131
]
Protein recycling
Others
Others
129839784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
PSII_BNR
Motif
Other DBs
NCBI-GeneID:
129839784
NCBI-ProteinID:
XP_055763397
LinkDB
All DBs
Position
40:complement(16333357..16511631)
Genome browser
AA seq
1287 aa
AA seq
DB search
MERGVRLCPIWHTCVFWFLLLIILSFFLAAKSEITCKSCQPGDKGRIKELLLKTDTREFA
TGHGGEVIGNGDGTTASQSLNSASAETQKLDCAAGSDECIQGKYMYSRRKRNTDMLLRSK
NALLDGGTHYGGGKQRKFTPRGEYKVSNLKMNRHAGNTDVGKVRADLIPGVTHKHRVRRD
SPRANIGDDKVKSSGSPQRREILPLSYSRDGITSPAGRSRVTRSELRWSNDRRAASSRQD
ELKLTSSTFALTGDSSHNQAMVHWSGQNSSVILMLTKLFDFNLNSVTESSLWRSTDYGTT
YQKLNEKVGAKTILSYLYVSPNNKRKIMLLTDPEVESSLLISSDEGATYQKYRLSFYILS
LLFHPEQEDWILAYSHDQKLYSSVEFGRRWQLVHERVAPNRFYWSKTGLDKEPGLIHLET
IISEGQALYVTCKLQNCTEANKGKPFPGYIDPNSLVVQDEYVFVQVSTGGRPIYYVSAKR
EVFTPMKLPKYTLPKDLHVISTDENRVVAAVQEWNQNDTYNLYVSETGGVFYTLALENVV
SSMGHEGNVMIDLYEVAGIKGMFLANKKMDNVVKTYITYNRGRDWRLLQAPTADLRGNSI
RCELPYCSLHLHLHVSANPYTSGNIESKDSAPGIIVASGSIGVELTTSNVSMFITSDAGN
TWRQIFDEEYSVLYLDQGGALVAIRHTPLPIRHLWMSFDEGREWNKYSFTMSPLFVDGLL
GEPGEETLIMTIFGHVSHRSEWQLVKIDFRSIFNRRCTEGDYQTWHLHNRGEPCIMGVKR
IYRKLKPIARCVMGKTYSVTMTSAPCDCTEADFECDYGYDRRSDGKCTPAFWFLPSSMSR
SCTTGTTFINSTGYRKVVSNNCTAGVIAEYTARRQHCPTQAPKGLHLVTSEGKLTATLGT
NVTFLVFLEEGDGARTSIMVDFGDGHALTYSNVSSIENGVKHVYKAVGIYRVTATGENSL
GSESAVLYLHVTCQLEYIHLSAPFVAVKSKEVNLTAVLWPSQVGTVTYIWWFGNNTEPII
TLEGSVACTFSREGVNTVTVQVSAGNAILQDRKTIAVHEYFRSHLLAFSSNLDDHNPDVA
EWRLDVSRVIKNSMVKATGVTPERLLVTVLPGLPTAAEFFLLPDKELTEGKPEKNSAHLD
QLTEILLSALNQNLVQFTLRPGVQVTVYAAHLSAAPLVDTSENHSGSAMLMLLSVVVLGL
AIFVVYKFKRKIPGLNVYAQMQNEKEQEMIQSPVSPTESTLVSPNTPRELVTSPELMDTE
LNTRPIGCIKSHAHVKFSTELPTYINV
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atggagaggggggtcagattatgccctatttggcacacctgcgttttttggtttctgctt
ttgataattctatctttctttctagccgctaaatcagagataacttgcaaatcatgtcag
ccgggagataaggggcgtattaaggaattactgcttaaaacggacacacgagaattcgca
acagggcacggaggggaagttattggaaatggagacgggacaactgcttcacagagttta
aattctgcaagtgccgaaactcaaaagcttgattgcgcagctgggtccgatgaatgcatc
caggggaaatacatgtactcaaggcgaaaacggaatactgacatgctgctccgttccaag
aacgcactactcgatggagggacgcactacggtggtggtaaacagagaaaattcaccccg
cgcggtgagtacaaagtttccaacctgaaaatgaatcgtcatgcaggcaatacagatgtc
gggaaggttcgcgcagatttaattcctggcgtcacacacaagcaccgagttcgtagggac
agcccgagagctaatattggggatgataaagtgaagtcctccggctcaccccagagaagg
gagatactgcctctgagttactcgcgagacggcatcacctcaccggctgggcgcagcaga
gtgacacggtccgaattgcgatggagcaacgacagaagagcggccagttcgaggcaggac
gaactcaaactcaccagttcaaccttcgcattgaccggagattcctctcacaaccaagcc
atggtgcactggtctgggcaaaatagcagtgtgattctcatgctgaccaagctgtttgac
ttcaacctgaacagtgtcacagagagctcattgtggaggtcaaccgactacgggaccact
taccagaagctcaatgagaaagtgggggcgaaaacaatcctcagctacttgtacgtcagt
cccaacaacaagagaaagatcatgcttctgactgacccggaggtggaaagcagcctgctg
atcagctccgatgagggagccacctatcagaagtaccgcctcagcttctacatcctcagc
ctgctcttccaccccgagcaggaggactggatccttgcctacagccatgaccagaagctg
tacagctcggtggagtttggaaggaggtggcaacttgtccatgagagggtggcccccaat
cgattctactggtcgaaaacgggtttagacaaagaaccgggcttaattcacctggaaacc
atcatctctgaaggacaggcgctgtacgtcacctgcaagctgcagaactgcaccgaggcc
aataagggcaagccgttccctggctacattgaccccaattcccttgtggtgcaagacgag
tatgtgtttgtccaggtgtcaactggtgggcgtccaatctactacgtgtcagccaagcgg
gaagtcttcacacccatgaagctacccaagtacaccttgcctaaggatctgcatgtgatc
agtacggatgagaaccgggtggttgcggcggtgcaggagtggaaccagaacgacacctac
aacctgtacgtgtcagagactggaggggtcttctacaccctggccctggagaacgtagtc
agcagcatggggcacgagggcaacgtcatgatagacctgtatgaggtggcgggtataaaa
gggatgttcctcgccaacaagaagatggacaacgtggtgaagacttacatcacctacaac
agagggagagactggaggctactgcaggctcccactgctgacctgaggggcaacagcatc
cgctgtgaactaccatactgttccctacacctccacctacatgtgtcggccaatccctac
acgtcggggaatatcgagagcaaggactctgccccggggatcattgtggcctcaggctcc
atcggagtggagttgaccaccagcaacgtgagcatgttcatcacctcggacgccggcaac
acgtggagacagatctttgatgaggagtacagtgttctctacctggaccaaggaggggcc
ctggtggctataagacacactccactccccatccgacacctatggatgagtttcgacgag
gggagagagtggaataaatacagtttcaccatgtcgcccctgtttgtggacgggttacta
ggggagccgggggaggagactctcatcatgacgatctttggccacgtcagtcaccggtcc
gagtggcagctggtcaagattgacttcaggtccatcttcaaccggagatgtacagagggg
gattaccagacatggcacctacacaaccggggcgaaccatgcatcatgggagtgaaaaga
atctacaggaagttgaagcccatagccaggtgcgttatgggtaagacgtactcggtcaca
atgacctcggcgccctgcgactgcacagaggctgactttgagtgtgactatggctacgat
aggcggagtgacggcaagtgcacccctgccttttggttcctaccatcgtcgatgtctaga
agctgcaccacagggactactttcatcaacagcacaggctacaggaaggttgtgtccaat
aactgcacagcgggcgtgatagcagagtacacggccaggaggcagcattgtcctacccag
gcccccaaaggcctgcacctcgtcaccagtgaaggaaagctgacagctacgctgggcacc
aatgtcaccttcctggtgtttcttgaagagggcgacggagccaggaccagcatcatggtg
gacttcggggacggtcacgctctgacctactccaacgtgagctccattgagaatggggtc
aagcacgtctacaaggctgtcgggatctaccgtgtgaccgctacaggagagaacagcctg
gggtcggagagcgcggtgctgtacctccacgtcacatgtcagctggagtatatccatctc
tccgctccctttgtggcggtgaagagtaaggaagtcaacctcaccgctgtgctgtggcct
agccaagtgggaacagtcacctacatctggtggttcggaaataacactgagccgataatc
accctggaagggagcgtggcgtgcacgttctccagggaaggcgtcaacactgtcaccgtg
caggtgtccgctgggaacgccatcctgcaggaccggaaaaccatcgctgtccacgaatat
ttcaggtcacatctactagccttctcatctaacctggacgaccacaaccccgacgtggcc
gaatggagactggacgtcagcagagtcatcaagaactccatggtcaaagccacaggggtg
accccggagcggctccttgtcaccgtcctaccaggtttgcccacggcagcagagtttttc
ctcctgccagacaaagagttaacagagggcaagccggagaagaactccgctcatttagac
cagctcactgaaatcttacttagcgccctcaaccaaaacctggtccagttcacgcttcgg
cctggggtccaggtcacagtatacgctgcacatttgtcagcagcgcccctagtggacacg
agtgagaaccacagcggctcggccatgctgatgctgctgtcggttgtggttctgggtttg
gcgatatttgtcgtctacaaattcaaaaggaagatcccaggcctcaacgtctatgcgcag
atgcagaacgaaaaagaacaagaaatgatccagagtccagtaagtcctacggaaagcacc
ctggtgtccccgaacactccgagggagctggtgacttctccagagcttatggacacagag
ttgaacacacggcccatcggatgcatcaaatctcacgcacatgtcaagttctcaacggaa
ctccccacgtacatcaacgtttaa
DBGET
integrated database retrieval system
