Salvelinus fontinalis (brook trout): 129839873
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Entry
129839873 CDS
T11136
Name
(RefSeq) netrin-1 isoform X1
KO
K06843
netrin 1
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sfon00536
]
129839873
Glycosaminoglycan binding proteins [BR:
sfon00536
]
Heparan sulfate / Heparin
Axon guidance molecules
129839873
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
BNR_6
Motif
Other DBs
NCBI-GeneID:
129839873
NCBI-ProteinID:
XP_055763546
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All DBs
Position
40:17092667..17179127
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AA seq
603 aa
AA seq
DB search
MLRILDTVVTVVTISFVVEGVLGGYGMSMFAAQTSPPDPCYDENGNPRRCIPDFVNSAFG
KEVRTSSTCGKTPGRYCLVTEKGDERNRNCHTCDASDPKKYHPPTYLTDLNNPHNLTCWQ
SENYIQYPQNVTITLSLGKKFEVTYVSLQFCSPRPESMAIFKSMDYGKSWVPFQYYSAQC
RKMYTKPSKATITKQNEQEAICTDSHTDMHPLSGGLIAFSTLDGRPSAHDFDNSPVLQDW
VTATDIKVTFSRLHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHASRCVKDRDGN
LVCECKHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSG
RKSGGVCLNCRHNTAGRHCHYCKEGYYRDLSKTISHRKACKACDCHPVGAAGKTCNQTTG
QCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVVPPTTTASSTEQPADCDSYCKASKG
KLKINMKKYCKKDYAVQVHILKADKAGEWWKFTVNIISVYKQGESRIRRGDQFLWVRAKD
VACKCPKIKTGKKYLLLGNNEDSPGQSGVVADKGSLVIQWRDTWARRLRKFQQREKKGKC
KKA
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgctaaggattttggataccgtggtcactgtcgtgaccatttcctttgtggtagagggg
gtgctcggtggctacgggatgagcatgttcgccgcgcaaacatctcccccggacccttgc
tacgacgagaacggtaacccgaggagatgcattcccgattttgtgaactctgctttcgga
aaggaagtccgcacttccagcacctgtggtaaaaccccgggtaggtactgcttggtaaca
gagaagggcgacgagagaaataggaactgccatacttgcgatgcctcggaccccaaaaag
tatcacccaccgacatatctaacggacctcaacaacccccataatctcacatgttggcaa
tcggaaaattacatccaatacccccaaaacgtcaccataacactgtcactgggcaagaaa
ttcgaagtcacctacgtaagcctgcagttctgctcacctcgacccgaatctatggctatc
ttcaagtctatggactacggcaaatcttgggtacctttccaatactattcggcccagtgc
aggaaaatgtacaccaaaccgagcaaggccaccattaccaaacagaacgaacaagaggcg
atatgcacggactcccacacggacatgcaccctctatccggcggtctcattgccttcagc
accctggacggcaggccgtcggcgcacgacttcgacaactcgccggtgctccaggactgg
gtcaccgccacggatatcaaggtgacgttcagccgattgcacactttcggtgatgagaac
gaggatgactcggagctagcccgggactcttatttctatgcggtgtccgatctgcaagtt
ggcggtcgatgcaaatgcaatggccacgcttcgcggtgcgtaaaagacagggatggaaac
cttgtttgtgagtgcaaacataataccgcgggaccggagtgcgacaggtgcaagcctttc
cattatgatcggccgtggcaacgcgcaacagctagagaagccaacgaatgtgtcgcctgt
aactgtaacctgcatgccaggcgatgccgtttcaacatggagctgtacaagctgtccggg
aggaagagcggaggagtctgtctcaactgtcgccacaacacggccggacgccactgtcac
tactgcaaggagggttactacagagacctgtccaaaaccatctctcacagaaaagcctgc
aaagcatgtgattgccatcccgtgggtgctgctggcaaaacctgtaaccaaaccacgggt
caatgtccctgtaaagacggcgtgactggtatcacgtgcaaccgctgcgctaaaggctac
cagcagagccgctcgcccattgccccctgcataaagattcccgttgttcccccgacaacc
acagccagcagtacagagcagccagcagactgtgactcctattgcaaggcgtcgaaaggg
aaactgaagatcaacatgaagaaatactgcaagaaagattacgctgtccaggtgcacatt
ctgaaggcagacaaggcgggcgagtggtggaagttcaccgtcaacatcatctctgtctac
aagcagggcgagagccgcatccgccgcggagaccagttcctgtgggtaagggccaaggat
gtggcgtgcaagtgtccaaagatcaagaccgggaagaagtacctgctcctgggtaacaat
gaggattctccagggcagtctggagtggtggccgataagggatccctggtcatccagtgg
agagacacatgggcccgtcggctgaggaagttccagcaacgcgagaagaaaggcaagtgc
aagaaggcatag
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