Salvelinus fontinalis (brook trout): 129839875
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Entry
129839875 CDS
T11136
Name
(RefSeq) xylosyltransferase 1-like
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
sfon00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
sfon01100
Metabolic pathways
Module
sfon_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
129839875
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
129839875
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sfon01003
]
129839875
Enzymes [BR:
sfon01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
129839875
Glycosyltransferases [BR:
sfon01003
]
O-Glycan biosynthesis
Glycosaminoglycan
129839875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Methyltransf_33
Motif
Other DBs
NCBI-GeneID:
129839875
NCBI-ProteinID:
XP_055763550
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All DBs
Position
40:3236478..3347698
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AA seq
969 aa
AA seq
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MVGGSCARRLARRSRSALIAALTVLLVQTLIVWNFSSLDSGEERENGGGGASNMREKRDR
VGGGGYKGSSEYMKREVQLQHHPPQGKGTVRHIQQPDGYYSHRPKEKVRVDSNNENSVPK
DFENIDNSNFGARSQPQRQPPGGANSNKHTERLQEKAHAEQATWKDNAPILSRSSNEVLQ
YGRAVAQNGSLPVGPKAVGAGVGSRNHHSRSSQPQSQGQAQTYPQSQSHPQTQHRHQHQH
QTRKQATAAPLEVVYDQPPKCEISGKEAISALSRAKTKECRQQIAEVYCRHKEGQLMPEK
VTRYCPIEGKANANVVWEEDSSEGPPSAPVRIAFVLVVHGRASRQFQRLFKAIYHTSHYY
YIHIDQRSNYLHRQVQALASQYPNVRVTPWRMATIWGGASLLTMYLRSMADLITMTDWSW
DFFINLSAADYPIRTNSQLVAFLSKYRDMNFIKSHGRDNARFIRKQGLDRLFFECDTHMW
RLGDRKIPESISVDGGSDWFLLNRPFVEYVINSQDDLVTNMKRFYTYTLLPAESFFHTVL
ENSAHCESMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPNDFKPADFHRFQQTARPTFF
ARKFEASVNQEIVNQLDGYLFGPMPRGTPGLQAYWESAFDEADGVATLSDTQLTLYHAFA
RMGLARAAASLQGDPRDDSCRYFPMGHPVSVHLYFQSDQFQGYLVKHHATNLATSKLETL
ETWVMPRKTYKVASPPSTFTRLQFAEIGTEWDAKERMFRNFGGLMGPMDETVGMQRWSKG
PNVTVTVVWIDPTNVIAATYDILIDASAEYTHYRPPLNQPLRPGVWTIRVLHHWSPVAET
RFLISPLAYMKHQPIRQEDTLKLHNGPAKNSYMEQSFHGLNPVLNIPVHLGQVEQAKRNA
ALTGPALEHWVDGLVGAMWEAGDVCSTSMTGGPGTSCPVMQTCAKTPWSSLSPDPKSQLV
PPHADGRIR
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggttggcggctcgtgcgctcgcaggttggcccgccgctcgcgttccgccttgatagcg
gctctcaccgtgcttctggtccagacgctgatagtgtggaacttcagtagcctcgattcc
ggggaagaacgggaaaacggcggcggtggcgcgtcgaacatgagggagaagagagaccgg
gtcggcggcggtggctacaaaggcagcagcgagtatatgaagcgcgaggttcagctacag
caccatcctccacaagggaaaggaacggttcgtcacatacagcagccggatggctactat
tcccaccgccccaaggagaaagtcagagtggacagcaacaatgagaactctgtgcccaaa
gactttgagaacatagacaatagtaactttggcgcccgttcgcagccccagcgccagccc
ccagggggcgctaacagtaacaaacacacggagaggctgcaggagaaggcccatgccgaa
caggcaacctggaaggataacgctccgattctgagccggagctccaacgaggttctccag
tacgggcgagccgtagcccagaatggctcacttcctgtgggcccgaaagcggttggagcc
ggggtgggctccaggaaccaccacagccgctcttcacagccacagagccagggtcaggct
cagacttacccccagtcgcagtcccacccccagactcaacatagacaccaacaccagcat
caaaccaggaagcaggcgactgcggctccattggaggtcgtttacgaccagccgcccaag
tgtgagatcagtgggaaggaagccatttcggctctgtccagagccaagaccaaggagtgc
cggcagcagatagctgaagtgtactgcagacacaaggaaggtcaactgatgcctgagaag
gtcacccgctactgtcccatagagggtaaggccaatgccaacgtggtgtgggaggaggac
tcgtcagagggcccaccgtcggcccccgtcaggatagccttcgtcctggtggtccacggc
agagcctcacgacagttccagagacttttcaaggccatctaccacacctcacactactac
tatatacatatagaccagcgctccaactaccttcacagacaggtgcaggccctggcctcc
cagtaccccaacgtgagggtgacgccctggaggatggctaccatctggggcggtgccagc
ctgctcaccatgtacctccgcagcatggcagacctgatcaccatgactgactggagctgg
gacttcttcatcaacctcagcgctgcagactaccccatcagaaccaacagccagctggtc
gccttcctgtccaagtacagagacatgaacttcatcaagtcccacggcagagacaacgcc
aggtttatccgcaaacaaggtctggaccggcttttctttgagtgcgacacccacatgtgg
cgacttggcgaccgcaaaatcccagaaagcatttctgtggacggcggttctgattggttc
ctgctcaatcgtccgttcgtggagtacgttataaactcccaagacgacctggtcaccaac
atgaagcgcttctacacctacactctgctgcccgccgagtcgttcttccacacggtgctg
gagaacagtgctcactgtgagagcatggtggacaacaacctgcgcatcaccaactggaac
aggaagctgggctgtaagtgtcagtacaaacacatagtggactggtgcggctgctccccc
aacgacttcaaacctgccgacttccaccgcttccagcaaacggcccgtcctacgttcttc
gccaggaagtttgaagccagtgttaaccaggagatagtgaaccaactagatggctacctg
tttggacctatgccccgggggacccctggcctccaggcctactgggagagtgcgtttgac
gaggcggacggggtcgcgaccctgagcgacacacagctcacactctaccatgcgtttgct
cgtatgggcctggcgagggcggcagcatcgctgcaaggagatcctagggatgacagctgc
aggtatttccccatgggccacccggtgtcagtgcatctctacttccagtcagaccagttc
caaggctacctggtcaagcaccatgccactaacctggcaaccagcaagctggagaccctg
gagacctgggtgatgcccaggaagacctacaaggtggcttccccacccagcaccttcacc
aggctgcagttcgccgagatcggcacggagtgggatgccaaagagcgcatgttccgtaac
ttcggtggtctgatgggtcccatggacgagaccgtcgggatgcagcggtggtccaagggc
cccaacgtgaccgtcaccgtggtgtggatcgaccccaccaacgtcatcgctgccacctac
gatatcctgatcgacgccagcgcagagtacacccactaccgaccccccctgaaccagccg
ctcaggcctggggtgtggaccatacgggtgttgcatcactggagccccgtggccgagact
aggtttctgataagtccgctggcttatatgaagcatcagcctataagacaagaggacacg
ctgaagctccacaacggaccagccaagaacagttatatggagcagagcttccatggcctc
aaccccgtgctcaacatccctgtacacctgggccaggtggagcaggctaagcgcaacgcc
gccctgactggccccgccttggagcactgggtagacggcctggtgggtgcgatgtgggag
gctggggacgtgtgttccacctccatgacagggggacctggaacatcctgccccgtcatg
cagacctgcgccaagaccccctggagctcgctcagccccgaccccaagtcccagctggtc
ccgccgcacgccgacgggcgcatcaggtag
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