Salvelinus fontinalis (brook trout): 129840265
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Entry
129840265 CDS
T11136
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129840265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfon04121
]
129840265
Enzymes [BR:
sfon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129840265
Ubiquitin system [BR:
sfon04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129840265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
PRY
zf-C3HC4_2
zf-C3HC4_3
Ig_DSCAM-DSCAML_C
zf-RING_2
Pur_ac_phosph_N
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
129840265
NCBI-ProteinID:
XP_055763988
LinkDB
All DBs
Position
41:11050717..11095762
Genome browser
AA seq
685 aa
AA seq
DB search
MDALESELTCPICLELFEDPLLLPCAHSLCFGCAHRILVSHCASNEPVQSIGAFQCPTCR
YVISLSPQRGLEGLKRNVTLQNIIDRVQRAASSGPLALLPHSGPNSPSEKAGRFALALVP
ASTAMTSPGTPPSHVQCQFCEQDPPQNAVKTCVTCEVSYCDECLRATHPNKKPFTGHRLI
EPMPDCHLRGLQCLEHEEEKVNMYCVTDEQLICSLCKLVGRHRDHQVAALSDRFEKLKQA
LDSNLSHLVKRNNELEGLMGKLIQTCQNVEVNASRQEGKLMEECDLLIDIIQQRRQIIGT
KIKEGKAVRIRKLAQQISNCKQCIERSSALITQADQTLKETDHARFLQTAKSITERVSMA
TASSQVLIPEINLTDTFDTFALDFTKEKKLLESLDYLTAPSPPGIREELCTASYDTITVH
WTSDDEFTVLSYELQYAIFTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFI
VKAINQAGARSSEPGTLKTNSQPFKLDPKSAHKKLKVSHDNLTVERDETASKKGHGQERF
TSQSSYGVVGNVYIDSGRHYWEALIGGSTWYAVGIAYKSAPKHEWIGKNSASWVLCRCNN
SWVVRHNSKELAIEPSPHLRRVGVLLDYDAGSLTFYDAVGSQHLHTFHVSFAQPVCPVFN
VWNKCLTVLTGLPIPEHLDGLETQD
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgctggagtcagagctgacttgcccaatctgcctcgagctctttgaggacccg
ctgctcctgccctgcgcccacagcctgtgcttcggctgcgcccatcgcatcctggtatcc
cactgcgcctccaacgagcccgtccagtccatcggagccttccagtgccccacctgccgc
tatgtcatctctctcagtccgcagcgtggcctagaaggactgaaacgcaacgtcaccctc
cagaacatcatcgaccgtgtccagagggccgcctcctccggccccctggccctgctgcct
cacagcgggcccaactcccctagcgagaaggccgggcgattcgccctggccctggtcccc
gcctccaccgccatgaccagccccgggacgccgcccagccacgtgcagtgccagttctgc
gagcaggacccgccgcagaacgccgtcaagacgtgcgtgacatgcgaggtgtcatactgc
gacgagtgcctgcgcgccacgcaccccaacaagaagcccttcacgggccaccgtctgatt
gagcccatgccggactgccacctgcgggggctgcagtgcctggagcacgaggaggagaaa
gtgaacatgtattgcgtcaccgacgaacagctcatctgctcgctgtgcaaactggtggga
agacaccgagaccaccaggtggcggccttgagcgaccgcttcgagaaactcaagcaagcg
ttggattccaacctgagtcatttggtcaagaggaacaatgagttggaggggttgatggga
aagttgatccaaacctgtcaaaatgtagaggtcaatgcatcacggcaggagggaaagctg
atggaagaatgcgacctcctgattgatatcatccagcaaaggagacagatcattgggacc
aaaatcaaggagggaaaggcagtccggatcaggaagctagcccagcagatctccaactgt
aagcagtgcatcgagaggtcctctgccctcatcacccaggccgatcagaccctgaaggag
acggaccatgcccgattcctccagaccgccaagagtatcaccgaaagggtttccatggcg
accgcctcctctcaggtcctgattccagagatcaacctgactgacacgtttgacacgttc
gctctggacttcaccaaggagaagaagctgttggagagcctggactacctcacagcgcca
agtcctccgggcatcagagaagagctctgcactgcatcgtacgacaccatcaccgtccat
tggacctcagacgacgagttcacagtgctttcctatgagcttcagtatgctatcttcaca
gggcaagccaacgttgtcagcctgtgtaactcagcagacagctggatgattgtgcctaac
atcaagcagaaccactacaccgtccacggcctgcagagtggcaccaagtacatcttcatc
gtcaaagccatcaaccaggcaggtgcccgcagcagtgagccagggacactcaaaaccaac
agccaaccattcaagctggaccctaagtccgcccacaagaagctgaaggtctcccatgac
aacctgacggtggagcgcgacgagacggcatcgaagaagggacacggccaggagcgcttc
accagccagagtagctacggcgtcgtcggcaacgtttacatcgacagcggacgccactac
tgggaggccctgattggaggaagcacatggtatgcggtgggcatcgcctacaagtcggcc
cccaagcacgagtggattggcaagaactcggcctcctgggtcctgtgccgctgcaacaac
tcgtgggtggtgcgccacaacagcaaggagctggccatcgagccttcgccccacctgcgc
cgcgtgggcgtcctgctggactacgacgctggctcgcttaccttctacgacgccgtgggc
tcgcagcacctgcacacgttccacgtgtccttcgcccagcccgtgtgccctgtcttcaac
gtatggaacaagtgtctgactgttctcacgggtctgcccatccctgaacacctagatggg
ttggaaacccaggactga
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