Salvelinus fontinalis (brook trout): 129840573
Help
Entry
129840573 CDS
T11136
Name
(RefSeq) CLIP-associating protein 1-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfon03036
]
129840573
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sfon04812
]
129840573
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
129840573
Cytoskeleton proteins [BR:
sfon04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
129840573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT
HEAT_EZ
Vac14_Fab1_bd
TOR1L1_N
Sec7-like_HUS
Adaptin_N
Cnd1
RTP1_C1
HEAT_DAAF5
MMS19_C
ParcG
Paxt-1_C
ZapG-like
KH_DEAH11_1st
Motif
Other DBs
NCBI-GeneID:
129840573
NCBI-ProteinID:
XP_055764516
LinkDB
All DBs
Position
41:14340348..14375698
Genome browser
AA seq
1577 aa
AA seq
DB search
MEWNMEYCMEQVMQKDLGRRLQVGQDIIDSILDKDKSQDLEQDQTMLDRMVDGVATNWVN
SSNFKVALLGMDILTALVTRLQERFRTQIGTVLPSLIDRLGDSKDQVRDQDQALLLKIMD
QAANPQYVWDRMLGGFKHKNNRTRESVCICLIATLNVYGAQGLTLSKIVPHICNLLGDPT
SQVRDGAMNCLVEIYRHVGERVRMDLGKKGLPQSRLNVIFSKFDEVQRTGNMILSPVSDK
NYDDDDSVDGGRSSSSKGPSSGKKAVSMGSFRRPSSASSTKSTGRDGPSAAAAGAVDEED
FIRAFEEVSTMELFSNREMEDAMTKIREVLADDKRDWEHRVTALKKMRSLLLAGAVDFDG
FSQQLRLMEAAFKMSAKDLRSQVVREACITLGHLSYILGNRFDHCAESIMPTLLTLVSNS
AKVMATSGIAVIRLIIRHTHYPRLIPIVTSSCLSKSVAVRRRCFEFLDLLLQEWQTNSLE
RNVAVLTETIKKGVHDADSEARSVARKCYWTFHGHFSREAEQLFQALESSYQKALQSHMK
SSDSILSLPASDRSSSSSQESLNRPQSAKSSMGNTVTRTKAAPSRGPSTPGSLQRSRSDV
DVNAAATTSAKSRMTPVPGSPAPFSAASALPPGSYASLDNTPGNIRPVGRVRTRRTSSGS
SVSASPSVIDSRGRSRAKMVSVSQPGSRSGSPGRLLSHTYGRISRATGGTTPAERRPKVP
RSHGCSRDTSPDRSGLARSRIPRPSMSQGCSRDTSRESSRDTSPARGFSPLASRRVSRST
SALHSAESVGHSERLGLAHQARISASVNAMRILNTGTEVEAAVADALLLGDARNNKRRPV
RRRYESPGIYSDDDANSDASSACSELSYGSRNGGPPHYMRQTEDVAEVLNHCASSNWSER
KEGLLGLQNLLVSQRILSRVELKRLCEIFTRMFADPHSKVFSMFLETLVDFITLHREDVQ
DWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPLDQQFNILMRFIVDQTQTPNLK
VKVAILRYIEGLARQMDPADFVNSSETRLAVSRIITWTTEPKSSDVRKAAQVVLIALFEL
NTPEFTMLLGALPKTFQDGATKLLHSHLRNSSNTREASPSSTMGRTPPPPRHPSSRSSPL
TSPTNCSHGGGLSPSRLWGWSADGLSKYPPPFPSLSSTPAAPSLKTLRSAYSPSMLEYDT
ENLNTDQIYSSLRGVTEAIQNFSFRSQEDLMEPGRGKREDTPGVGTASHSGVDVVEGPGG
RTALDNKTSLLNTPSPRSFSGPRGRDYNPYNYSDTISAYDKAALRETVYEDDVEQLRDGR
QECGGENKMLHTKNSSPAEQLGLVAELLKELSSPSERPEERRGALVELLKIAREDSLAVW
EEHFKTMLLLLLETLSDQDHTIRALALRVLKEILRNQPARFKNYAELTIMKTLELHKDSH
KEVVRAAEESASTLAGSIHPEQCIKVLCPIVQTADYPINLASIKMQTKVIERITKESLHQ
LLPDIIPGLLQGYDNTESSVRKASVFCLVAVYSVIGEELKPYLAQLTGSKMKLLNLYIKR
AQTSTSNSSSSSDISSY
NT seq
4734 nt
NT seq
+upstream
nt +downstream
nt
atggagtggaatatggagtactgtatggagcaggttatgcagaaggacctgggtcggaga
ctacaggtgggccaagacatcatagactccatcctggacaaggacaagtcccaggacctg
gagcaggaccagaccatgctggacagaatggtggatggtgtcgctaccaactgggtcaac
tccagcaatttcaaggtggctttgttgggaatggacatactgacagctttagtaacaaga
ctacaggaacggtttaggacacagattggaactgttttgccgagtttgatagatcgacta
ggcgactcaaaggaccaagtcagagaccaggaccaagctcttctgctaaagatcatggac
caagctgctaacccacagtatgtatgggaccgaatgttaggaggattcaaacacaagaac
aacaggaccagggagagtgtctgcatttgccttatcgccacgttaaatgtatatggagct
caaggcttgaccctcagcaaaattgtcccccacatatgtaatcttttaggagaccctaca
agccaggtgcgagacggggccatgaactgtctcgttgaaatctacagacacgtcggggag
agggtgcggatggacctggggaaaaaaggactgccacagtcacggttgaatgtcattttc
agtaaatttgatgaagttcaaagaacagggaacatgatcctgtcccctgtctcagataag
aactatgatgatgatgattcggtggacggggggcggtcctcctcttctaagggcccgtcg
tcagggaagaaggcagtgagcatggggtcgttccgtaggcccagctctgcttccagcacc
aaatcaacagggagagatggtcctagtgcggctgctgcaggggctgtggatgaggaggac
ttcatccgggccttcgaggaagtgtccactatggaacttttctctaacagggaaatggag
gacgccatgaccaagatcagagaggtgctggccgacgacaaacgagactgggagcacaga
gtcactgcgttgaagaagatgcgttctctactcctggcgggagcggtggactttgacggt
ttctcccagcagctgcgtctcatggaggcagccttcaagatgtccgctaaagacctgcgc
tctcaggtggtcagagaggcctgcatcactctgggccacctgtcctacatcctggggaac
aggtttgaccactgtgcagagtccatcatgcccactctcctaaccttggtctctaactcg
gccaaggtcatggccacatccggcatcgctgtcatacgactcatcatcaggcatacacac
taccctcgtctcattcctatcgtgaccagcagctgcctgtcgaaatctgtggccgtaaga
aggcgctgttttgagtttttggacctcttgctgcaggagtggcagaccaactctctagag
aggaatgtagctgttctgacagagaccatcaagaaaggagtccatgatgcagactccgaa
gcccgatcagtggccaggaagtgctactggacgttccacggccacttcagccgggaggcg
gagcagctgttccaggctctagagtcgtcctatcagaaggctctccagtcccacatgaag
agttctgacagcatcctgtccctccctgcctcagaccgctcctcctcctcctcacaggag
agcctcaaccgccctcagtctgccaagagctccatgggaaacacagtgaccaggacgaaa
gcggctccctccagaggtccctccaccccgggctctctccagcgttcccgtagcgacgtg
gacgtgaacgctgctgccaccactagtgccaagtccaggatgactcccgtgcccggctca
cccgcccccttcagtgctgcatcagctctgccacccggctcctatgcctctctagacaac
acacctggtaacattagaccagtgggccgtgtgcgtaccaggagaacgagttcggggagc
agcgtgagtgcgagtccctctgtcatagacagtagggggaggagtcgagccaaaatggtg
tcagtgtctcaacctggcagtcgttctggctcccctggtcgtctcctgagccatacatac
ggcaggatctccagggccactggagggacaacgccagcagaaaggaggcctaaagtcccc
cgcagccatggctgcagccgagacaccagtccagacagatcaggcctggcgaggagtcgt
atcccccggcccagcatgagtcagggctgcagcagggacacctctagggagagcagccga
gacaccagccccgctcggggattctctcctctggcgtccagacgtgtctcccgctccacc
agtgctctccactcggctgagtctgtgggccactcagagcgtctaggtctggcccaccag
gcccgtatctcagcttctgtcaacgccatgaggatcctcaacactgggaccgaggtggag
gcagctgtagccgacgccctgttactaggagacgccaggaacaacaagcggcgaccagtc
agacggcggtacgagtccccggggatctactcagacgacgacgctaacagcgacgccagc
agcgcctgctctgagctctcgtatggctcgcggaacggcggcccgccccactacatgaga
cagacggaggacgtggccgaggtgctgaaccactgtgccagttccaactggtctgagagg
aaggaggggctgctgggactacagaacctgctcgttagccagagaattctcagtcgtgtg
gagctgaagagattgtgtgagatcttcacaaggatgtttgctgacccacacagcaaggtg
ttcagcatgtttctggagaccctggtagacttcatcaccctgcacagagaggacgtgcag
gactggctgtttgtcctgctcacccagctgctgaagaagatgggagctgacctcctgggt
tccgtacaggccaaggtccagaaggctctggacgtcaccagggactcgttcccgttggac
cagcagtttaacatcctgatgcgtttcatcgtcgaccagacccagacccccaacctgaag
gtcaaggtggccatcctgaggtacattgagggcctggcccgtcaaatggaccccgcagac
tttgtcaactccagcgagacgcgcctggccgtctcccgcatcatcacctggaccacggaa
ccaaagagctccgacgtccggaaggcggctcaggtggttctgatcgccttgtttgagctg
aacaccccagagttcaccatgctgctgggggccctgcccaagaccttccaggacggagcc
actaaactgctgcatagccacctgcggaactccagcaacaccagagaggcttctcccagt
agcaccatgggacggactcctcccccacctcgccaccccagcagtcgcagcagccccctc
acctctcccaccaactgctcccatgggggggggctctctcccagccggctatggggttgg
agtgctgatggcctgtcaaagtacccccctcccttcccttctctctcctccacccctgct
gcaccctccctcaagaccctgcgaagtgcttactctcccagcatgttggagtacgacaca
gagaacctgaacaccgatcagatctatagctccctgcgaggcgtcactgaggccatccag
aacttcagcttccgcagtcaggaggacctcatggagccaggcagaggcaagagagaggac
acgccgggtgttggaacagcatcacactctggtgttgatgtggtggaggggcccgggggt
cgcacggccctggacaacaagacctccctactcaacaccccctccccccgttccttctcc
ggcccccggggccgcgactacaacccctacaactactctgacaccatcagcgcctacgac
aaggctgcgctgagagagacggtgtacgaggacgacgtggagcagcttcgagatggccgc
caagagtgtggtggagaaaacaagatgctgcacaccaagaacagttcccctgcagagcag
ctgggactggtggctgagctgctgaaggagctgtctagccccagtgagaggccagaggag
aggaggggagccctggtggagctgctgaagatagcccgggaggacagcctggccgtgtgg
gaggaacacttcaaaaccatgctgctcctgctgctggagactctgtcagaccaagatcac
accatccgggccctggcgctacgagtgctgaaggagatcttacgcaaccagccggcccgc
ttcaagaactacgcagaactcaccatcatgaagaccctggagctacacaaagactcccac
aaagaggttgtgcgggcagcagaggagtcagcctccaccctggccggctccatccaccca
gaacagtgtatcaaggtgctgtgtcccatcgtgcagacggctgactaccccatcaacctg
gcttccatcaagatgcagaccaaggtgatagaacgcatcaccaaggagtccctccaccag
ctgctgcctgacatcataccaggactactgcaggggtatgacaacacagagagcagtgtg
aggaaggccagtgtgttctgtctggtggctgtctactctgtcatcggtgaagagttgaag
ccctacctggcccagctcacaggaagcaagatgaagctgctgaacctgtacataaagaga
gcccagacgtccaccagcaacagcagcagctcctcagacatctcctcatactaa
DBGET
integrated database retrieval system
