Salvelinus fontinalis (brook trout): 129840629
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Entry
129840629 CDS
T11136
Name
(RefSeq) protocadherin-17-like
KO
K16499
protocadherin delta 2
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfon04515
]
129840629
Cell adhesion molecules [BR:
sfon04515
]
Cadherins
Protocadherins
129840629
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
PepSY
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
129840629
NCBI-ProteinID:
XP_055764615
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All DBs
Position
41:complement(6714900..6796967)
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AA seq
1145 aa
AA seq
DB search
MYLSILFFLLLWAQALALKNLNYSVNEEQGPGTVIGNIAKDAKLGLGQGGQGKKSNFRVL
ENSAPHLIDVDPESGLLYTKQRIDRETLCRRNPKCQLSMEVFANDKEICMIKVDIVDIND
NSPTFPSDQIDIDISENAAPGTRFPLTSAHDPDAGENGLKTYQITRDDYNLFSLDVKSRG
DGTKFPELVIQRPLDREERNHHTLILTATDGGEYPRSGTMQINVKVIDSNDNSPVFEQPS
YVVDIPENSPPGKVLIDLNATDPDEGSNGQVVYSFSGYAPDRIRELFSIDSRTGVIKIQG
EIDYEENSIIEIDVQAKDLGPNPIPGHCKVTVNVIDRNDNWPSIGFVSVRQGAISEAAPP
GTVIALVRVTDKDSGRNGKLQCRVLGNVPFKLEENYDNFYTVVTDRPLDREQQDEYNVTI
VAKDNGTPPLNSTKSFTVKILDENDNVPRFTKAVYLLQVPENNIPGEYLGSVLALDPDLG
QNGTVFYSILNSNVSGGDVNTFVNVNAANGAIYAVRSFNYEQIKFFDFKVLAKDAGSPHL
ESNSTVRVSVLDVNDNIPVIVLPLLLNDTAEIHVPRNVGVGYIVTTVRAVDNDYGESGRL
TYEISDGNEERLFEMDPVTGEVRTAHPFWEDVSPMVELIIRVMDHGKPTLTTAARLIVKA
YSGPLPGGEPHINEEHHNWDTSLPLIVTLSIISTMLLAAMVTIAVKCKRENKEIRTYNCR
IAEYSHPQLGKGKKKKINKNDIMLVQSEVEERDAMNVMNVVSSPSLATSPMYFDYQTRLP
LSSPRSEVMYLKPTASNLLVPQGQGHGVGCHTSFTGPVTNTTDTPSNRMSIIQTDNFPAE
PNYMGSRQQFVQSSSTFKDPERASLRDSGHGDSDQADSDQDTNKGSCCDMSAKEALKMKA
TGVKPPPLEQEEDCVNCTEECRVLGHSDRCWMPQFPAGGGGANQAEGVDYRNNLFVPAGM
EVATETTEAYETVNPNGKKTFCTFGKERRDHTLLVANVKPYLKAKRALSPLLQEVPSASN
SPTKGCSSSSNNSPCASSTKSPADGAETKPTPSHYCSGPPDGQYHSPNKQSRDPGLLQHY
GTHGSGLSPGHPAYPSLSCDPVAKVLAEARSRISQEAGVGTEMDCVLEMDGGNHGGGEMG
RDGVD
NT seq
3436 nt
NT seq
+upstream
nt +downstream
nt
atgtatctttctattttatttttccttctcctttgggctcaagccctggctttgaaaaac
ttgaattattccgttaacgaagaacaaggaccggggacggttataggcaacatcgccaaa
gacgctaaactcggtctcgggcaagggggacaagggaaaaagtccaacttcagggttttg
gagaattcagcaccacatctcatcgatgtggaccctgagagcgggctgctctacactaag
caacgcatcgacagggaaacactgtgtcggcggaaccccaaatgtcaactctccatggag
gtatttgctaacgacaaagagatctgcatgattaaagtagatatagtcgacatcaacgac
aactcgcccacgttcccttccgatcagattgatattgacatttctgagaacgctgccccg
ggcacccgtttcccgctgactagtgctcatgacccggacgctggagaaaacgggctaaaa
acctatcagatcacacgagacgactacaatctgttttctctggatgtaaaatcccgcggg
gacggaacaaaatttcccgagttagttatccaacggccgttagaccgggaggaacgcaac
catcacaccctcatcctaaccgctacggacggcggggagtatcccagatcaggaaccatg
cagattaatgtgaaagttattgactctaacgacaacagccctgtgtttgaacagccctcg
tatgtcgtagatatcccagaaaactctccacctgggaaagtattgatcgatttaaacgcc
acagacccagacgagggttccaatgggcaggtcgtgtattcattcagcggttacgcgccc
gacagaatcagagaactcttctctatagattctagaacgggagtcataaaaatccaagga
gagattgactatgaggagaactctattatagaaatagatgttcaggctaaggatttaggc
cctaaccccatcccaggccactgtaaagtaactgtgaatgtgattgacaggaatgacaac
tggccctccatagggtttgtgtctgtgaggcagggggccattagtgaggccgccccgcca
ggcaccgtcatcgccctggtcagagtcacggataaagactctggcaggaacgggaagctc
cagtgtagagtcttggggaacgttccgttcaaactagaggagaactacgacaacttctac
accgtggtgacggacaggcctctggacagagaacagcaggacgagtacaacgtcaccatc
gtcgccaaggacaacggcacgccgccccttaactccaccaagtcgttcacggtgaagatt
ctagatgagaacgataatgttccgcgcttcaccaaagccgtgtatctgctccaggtgccg
gagaacaacatccccggggagtatctgggttccgtcctcgctctagacccggacctgggc
cagaacggaaccgtgttctactccatcctcaactccaacgtgagcggaggagacgtcaac
accttcgtgaacgtgaacgcggccaacggggcgatctacgccgtgaggtcattcaactac
gaacaaatcaaattctttgattttaaggttttagcgaaggatgctgggtctccccacctg
gagagcaacagcacggtcagggtcagcgtcttagacgttaacgacaatatccccgtcatc
gttctcccgctgctcctgaacgacacggcagagatccacgtgccacggaacgtcggcgta
ggttacatcgtcaccacggtgagggcggtcgacaacgattacggcgagagcgggcggttg
acctacgagatctctgacggtaacgaggagcgtctgttcgagatggacccggtgacgggc
gaggtgcggaccgctcaccccttctgggaggacgtcagccccatggtggagctgatcatc
agggtgatggaccacgggaagcccaccctcaccaccgccgcacgcctcatcgtcaaggcc
tacagcgggccgctgccgggcggggagccccacatcaacgaagagcatcacaactgggac
acctcgctccctctcatcgtcaccttatccatcatctctaccatgctgctggctgccatg
gtaaccatcgccgtgaagtgcaaacgggagaacaaggagatcaggacgtacaactgccgc
atcgcggagtactctcacccacagctgggcaaaggcaagaagaagaagatcaacaagaat
gacatcatgctagttcagagcgaggtggaggaacgggacgccatgaacgtcatgaacgtg
gtgagctcaccatcgctcgccacctcccccatgtatttcgattaccagacgcggctgccg
ctgagctcgcccaggtcggaggtcatgtacctcaagcccacggccagcaacctgttggtg
ccccagggacagggacacggcgtcggctgtcacacgtccttcactggcccggtgactaac
accacagatacccccagtaacaggatgtccattatacagacagacaattttcccgctgag
cccaattacatgggcagcaggcagcagtttgttcaaagcagctcgacattcaaggaccca
gagcgagccagccttagagacagtggtcatggagatagtgatcaggccgatagcgaccag
gacactaataaaggctcctgctgcgacatgtcggccaaggaggctctgaagatgaaggct
acgggggttaaaccacctcctcttgaacaggaagaagactgtgttaactgcacagaggaa
tgcagagtcctcggccactccgaccgctgctggatgccacagttcccggcgggaggggga
ggagccaaccaggcagagggtgtggactaccgcaacaacctgttcgtccccgcggggatg
gaggttgccacagagaccacagaagcctacgagaccgtcaaccccaacgggaagaagacc
ttctgcaccttcgggaaggagcgtcgggaccacacccttttagtggctaacgtcaagcct
tacctgaaggccaagagagccctgtctccgcttctccaggaggtcccctcagcctccaac
tcccccactaaaggctgctcctcctcctctaacaactctccctgcgcctcctccactaaa
tcccccgcagacggagccgagaccaaacccacccccagccactattgctctggccccccc
gacgggcagtaccactcccccaacaaacagagcagagacccaggtctcctccagcactac
ggcacccacggctcaggactatccccgggacacccagcctacccttctctttcctgcgac
cccgtggccaaggttctagcggaggcccggtcccgaatcagccaagaggctggggtgggg
acggagatggactgtgttctggaaatggacggggggaaccacggaggtggggagatgggt
cgggacggggtcgatg
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