Salvelinus fontinalis (brook trout): 129840646
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Entry
129840646 CDS
T11136
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129840646
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
129840646
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_2
zf-CCCH_4
UBA_N4BP1_C
UBA_N4BP1
Motif
Other DBs
NCBI-GeneID:
129840646
NCBI-ProteinID:
XP_055764641
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Position
41:9487558..9500366
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AA seq
892 aa
AA seq
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MGLKDHPEEDGAGRILDLGLDLEYLHIEGSVSRQAGADTGPSMERGEEEEEACKGSGSCS
LSTPGGKEVVGEESAGFDSDPEPARNSTGSNPAGRVSVSELDGVPVPNTHQPLCRTPCVD
LGSEGPPDPPSGEPSSGEALREYQSKLEFALKLGYTEELVRLVLAKLGPYTLINDILGEL
VKLGRKVETNQQLTGSTASQTASSTCSSSSSSSSCGYVEAVEAQQGRTDSPYQTDLLLGD
KDNLRPVVLDGSNVAMSHGNKEVFSCYGIQLAVDWFLERGHRDITVFVPSWKKEQSRPDA
LITDQDILRRLEKDKILVFTPSRRVQGRRVVCYDDRFIVKLAYESDGIIVSNDNYRDLAS
EKPEWKKLIDERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPIMPEHKKQPCPYGKK
CTYGHKCKYYHPERSAQCQRSVADELRASAKTSATSTSAKGQAGEAGLVKSHSVPNNVAM
GTKRGSAPKRQCDPSIRALSYGEAEGKLRHAEKCNSLSSSSGSSCSGSVTLSPAPGGPPS
ALSDPQEQPPSLGRDTPYMTLPHPHPDPYSSSCDPPDLSYYSVTPAHSGLAAQRSPECRF
PLDTDLRLLGSSDCGSSGCDSYGERASCLCFPGPLLDKYIHHQHHQHHQHNRLYSQHSAP
LLEPHHPHTSVLYGYHQSLARGHSFPHDEPPDPHLKRPLYPLPPPLQHQAVGARSSCPGD
YPSVSQSGPYPAGSPLGRCLANTRLETLSDSRLYERSLLPPRKAFSWDPYCSQPPQSRYE
TYQSLPETHDVGWGHTSPWGQTTHSYHQPYPPQPPHPSHASQPSHPSMPPHHMHQEPPAL
SRYGEVRGKVYLNLCNIFPSELVGRVMGRNPHVTDAQQLAAAILAEKSQSGY
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgaaggaccatccggaggaggatggagcaggccgcatcctcgacctggggctg
gatttagagtacctccacatcgaaggctccgtcagcaggcaggctggcgccgatacaggg
cccagtatggagcggggcgaggaggaggaagaggcctgcaaggggagtggcagttgcagc
ttgtccacgcctggggggaaggaggtggtgggggaggagagcgctgggttcgacagtgac
ccggagccagcccgaaacagcaccggttctaacccggctggaagagtgtccgtatctgag
ctagatggagtgcctgttcccaacacccaccaacctctgtgcaggactccctgtgtggac
ctggggtccgaggggcctcctgaccctccgtcgggggagccttcatccggggaagccctg
agggagtaccagtccaagctggagtttgctctgaagctgggctacaccgaggagctggtg
cggctggtgctggccaagctggggccgtacacactcatcaacgacatactgggagagctg
gtcaaactgggccgtaaggtcgagacaaaccaacagctgactgggtccacggcttcacag
accgcctcctccacctgctcctcctcttcctcctcttcttcctgtgggtatgtggaggca
gtggaggcgcagcaggggaggacagactccccttatcagacagacctcctcctgggggac
aaggacaacctgcggcccgtcgtcctggacggtagcaacgtggcaatgagccacggcaat
aaagaggtgttctcctgctacggcatccagctggctgttgattggttcctggagcgaggt
caccgtgacatcactgtgtttgtgccgtcctggaagaaagagcagtcccgccctgacgcc
ctcatcacagaccaggatatcttacgtcgtctggagaaggacaagatcttggtgttcact
ccgtctcgtcgggtccagggtcgccgggtggtctgctatgacgaccgtttcatcgtcaag
ctggcctatgagtccgacggcatcatcgtctccaacgacaactaccgcgacctggccagt
gagaagccagagtggaagaagttaattgacgagcggctgctcatgtactcgtttgtcaac
gacaagttcatgcctcctgatgaccctctaggtcgtcatggtcccagtctggagaacttc
ctgaggaaacgtcccatcatgccagagcacaagaagcagccctgtccttacggcaagaag
tgcacttacggccacaagtgtaagtactaccacccggagaggagtgcccagtgccagcgc
tcggtggcagacgagctgcgtgccagcgccaagacctctgccacctctactagcgccaag
ggccaggctggcgaggctgggctggtgaagagccacagcgtgccaaacaatgtagcgatg
ggtaccaaaagaggttctgcccccaaaaggcagtgtgaccccagcatccgggcgctgtcc
tacggtgaggcagagggcaagctgagacacgctgagaaatgcaacagcctcagtagtagt
agtgggagtagttgtagtgggagtgttactctgtcccctgcccctggaggacccccctct
gccctcagcgacccccaggaacagccaccgagcctgggcagggacacaccctacatgacc
ctgccgcacccccaccctgacccctactcctccagctgtgaccctccagatctgagctac
tactcagtgacgccggcccactctggcctggcagcacagaggagtccagagtgccgcttc
ccgctggacacggacctgcgtctgctgggctcgtcagactgtggcagcagcggatgtgac
tcgtacggagagagagcctcctgtctgtgcttccccggccctctgctggacaaatacatc
caccatcagcatcatcagcaccatcaacacaaccgcctgtactctcaacactctgccccc
ctgctcgagccacaccacccccacacctctgtcctctatggctatcaccagagcctggca
cggggccacagcttccctcacgacgagccccctgacccccacctgaagcgccctctgtac
cccctcccgcctcccctccagcaccaggccgtaggcgcccgctccagctgccctggagac
tacccctctgtgtcccagtccggcccctaccctgctggctcccctctgggccgctgcctg
gccaacacgcggctggagacgctgtcagactcccggctgtacgaacgctccctgctgccc
cccaggaaagccttctcctgggatccctactgcagccaaccccctcagtcccgctatgag
acttaccagagtctaccggagacccacgatgtaggctggggacacacatctccatgggga
cagaccacacactcttaccaccaaccctacccccctcagccccctcacccatcccatgcc
tctcagccatcccacccgtccatgcccccccaccacatgcaccaggagccccccgccctg
agccggtacggggaggtgcgggggaaggtctacctcaacctgtgtaacatcttcccctct
gagctggtgggccgggttatggggaggaacccccatgtgacggacgcccagcagctagct
gccgccatcttggctgagaagtcccagtccggctactga
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