Salvelinus fontinalis (brook trout): 129840715
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Entry
129840715 CDS
T11136
Name
(RefSeq) integrin beta-6-like isoform X1
KO
K06589
integrin beta 6
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04510
Focal adhesion
sfon04512
ECM-receptor interaction
sfon04810
Regulation of actin cytoskeleton
sfon04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129840715
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129840715
09142 Cell motility
04820 Cytoskeleton in muscle cells
129840715
04810 Regulation of actin cytoskeleton
129840715
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfon04147
]
129840715
04515 Cell adhesion molecules [BR:
sfon04515
]
129840715
Exosome [BR:
sfon04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
129840715
Cell adhesion molecules [BR:
sfon04515
]
Integrins
Integrin beta subunits
129840715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
I-EGF_1
PSI_integrin
EGF_integrin
EGF_2
EGF_Teneurin
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
129840715
NCBI-ProteinID:
XP_055764794
LinkDB
All DBs
Position
41:complement(13994349..14011531)
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AA seq
786 aa
AA seq
DB search
MGIAVLLVLILRHWINNVEGTCSVGSAVTCDECLQLGPHCAWCTQENFTDSFLISERCDT
PYVLLERGCAQDLVEFPVTNSEVHKDQPLGKKTGNTNSTQISPQKMALKLRTGSEVTFQI
SVQQTEDYPVDIYYLMDLSASMIDDLEMIKDLGSTLSKEMAKLTSKFRLGFGSFVEKPVL
PFIKITPGELENPCRSVDESCLPTFGYKHVLPLTSSTEKFNSIITNQRVSANIDLPECGF
DAIMQAAVCGDKIGWRNDSMRLLVFVSDADSHFGMDSKMSGIVVPNDGECHLDSNNEYSM
AAHLEYPTLGQLMDKLVDNNILLIFAVTENQKHNYENYAHFIPGATVGVLESDSRNILEL
IVTAYKELRSEIELEVLGDTEDLQISFTAICQDGTVLPGQKRCSNVKAGDTVSFNVTVEL
SECLDGPQRFLIKPVGFQDPLEIDLESLCSCACHQTPEPNSSHCSLGRGSLECGSCLCDP
GYMGSKCECTEESVQSSNCKASGAPESCSGQGECFCGQCVCHPSSFGRVYGAYCECDDFS
CVRFRGVLCGGHGDCDCGECVCQSGWAGEYCNCSSSRDKCVSEDGALCSGRGKCVCGKCV
CSMPGASGDTCERCPTCGDSCSSARTCVECHLQAEDEATEECVQRCSVPHVFVNNSTEYD
ESRSTLCTLMSENNCFISFSVVAGDIGSTVYNLKMYDCPEPPNIAMIVLGVSLSILTIGL
ILLGVWKLLISVHDRNEVAKFEAERAKAKWQSGTNPLFRSSTSTFKNVTYKSAGGLKVDI
HSMDGY
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggggattgctgtacttctggtcctgattcttcggcattggatcaacaacgtggaggga
acatgttcggttggcagcgcagtgacttgtgacgagtgtctccagctgggtccccactgt
gcatggtgcacacaagagaatttcacagactcgtttttaattagtgagcgatgtgacacg
ccgtacgtcctcctagagagaggctgtgcccaggacctggtagaatttcctgtgaccaac
tccgaggtccacaaggaccagcctctcgggaagaaaacggggaataccaacagcacacag
atatcaccacagaagatggccctcaaactcagaactggcagtgaggtgaccttccagatc
agtgtgcagcagacagaggactaccctgtagacatctactacctgatggacctctcagcc
tccatgattgacgacctggagatgattaaagacttgggctccaccctgtccaaagagatg
gcaaagctcaccagtaaattcagacttggattcgggtccttcgttgagaaaccagtcctc
ccgttcattaagatcactcctggagagctggagaacccttgtaggagtgtggatgagagc
tgtctgccaacgtttggatacaaacacgtcctccccctcaccagcagcacagagaagttc
aacagtatcatcaccaaccagcgtgtgtctgccaacatcgacctgccggagtgtggcttc
gatgccattatgcaggctgctgtctgtggcgacaagataggctggaggaacgactccatg
cgcctgctggtgtttgtgagcgacgccgactctcactttgggatggacagcaagatgtca
ggcatcgtcgtccctaacgacggggagtgccatctggacagcaacaatgaatactctatg
gctgcccatctggaatacccaactctgggacagctgatggataaactggtggacaacaat
atcctgcttatattcgctgtgacggaaaatcagaaacacaactacgagaactatgcacat
ttcatacctggtgccactgtgggggttctggaatcagattcaaggaacatcctggaactg
attgtgacggcgtataaagagctgcgctctgagatagagctggaggtactaggagacacg
gaggatctacagatctccttcacagcgatctgtcaggatggcacggtactacctggacag
aaacgatgctccaacgtcaaagctggagacacggtctccttcaacgtgactgtagaactc
tctgagtgtctcgacggtccccagcgtttcctcatcaaaccggtgggctttcaggacccc
ctggagatagacctggagtccctgtgctcctgtgcctgtcaccagacccccgaacccaac
agcagccactgcagcctgggccgtggatctctggagtgtggctcctgtctgtgtgatcca
gggtacatgggttccaagtgtgagtgtacggaggagagcgtccagagcagtaactgcaag
gccagtggcgctccggagtcctgtagcgggcaaggggagtgtttctgcggccagtgtgtg
tgtcacccgtctagtttcggacgtgtctacggggcctactgcgagtgtgacgacttctcg
tgtgtgaggttccgaggggtcctctgtggaggtcacggggactgtgactgcggcgagtgt
gtgtgtcagagcggctgggcgggggagtactgtaactgcagcagcagcagggacaagtgt
gtgtcggaggacggagcgctgtgcagcggacgggggaagtgtgtgtgcgggaagtgtgtg
tgttccatgcccggagcctctggagacacctgtgaaaggtgtcctacctgtggagactcc
tgtagctctgctaggacctgtgtggagtgtcatctacaagcagaagacgaggccacagag
gagtgcgtccaaaggtgcagcgtccctcacgtcttcgtcaataattccacagaatacgac
gagagccggtccacgctgtgtaccctaatgagtgagaacaactgcttcatctcgttcagt
gtggtggctggagacatagggagcactgtgtataatctaaagatgtacgactgtcctgag
ccccccaacatagctatgatagtactgggggtctctctgtccatcctcaccatcggcctc
atcctgctgggggtgtggaagctgctgatctcagtccacgaccgcaatgaggtcgccaag
tttgaggccgagagggcaaaggctaaatggcagtcgggtacaaatcctctgtttagaagc
tcgacatcaacgtttaaaaatgtaacttataaaagcgcagggggactgaaagttgatatt
cattcaatggatggctactga
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