Salvelinus fontinalis (brook trout): 129841575
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Entry
129841575 CDS
T11136
Name
(RefSeq) LOW QUALITY PROTEIN: interferon-induced very large GTPase 1-like
Organism
sfon Salvelinus fontinalis (brook trout)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
RHD3_GTPase
Dynamin_N
MMR_HSR1
P4Ha_N
AAA_16
Dynein_AAA_lid
Pox_A_type_inc
Motif
Other DBs
NCBI-GeneID:
129841575
NCBI-ProteinID:
XP_055765887
LinkDB
All DBs
Position
42:3894912..3969465
Genome browser
AA seq
2709 aa
AA seq
DB search
MEKPDDEELPGSTGGEGDGNDTTPVHSTGPPDSTPDIVAMLQGFMLNQQQSMQAVQQQIS
QLQEEVQKGKTKQLCVVTPLAAANPDTLTRPAPQSPAEVLSEHLDKEEEAERNFQEKEPL
TQARDESKPEEDGSSGENIETTQVLPAPDQLTVDSVDTTSAAVSWNKPPGLDQTQHHYQI
SYQCLGTEPHITTTSSHSITLSDLQCGTQYSINVCTVLENGKKSQLESTTLFTILPAPDQ
LTVDSVDTTSAAVSWNQPPGLDQTQHHYQISYHCPGTEPHITTTSSHGITLSDLQCGTQY
SVTVCTVLENEKQSQLVSKTFTTILPAPDQLTVDSVDTTSAAVSWNQPPGLDQTQHHYQI
SYHCPGTEPHITTTSSHSITLSDLQGGTQYSINVCTVLENGKQSELVSTTLTTVLPAPDQ
LTVDSVDTTSAAVSWNQPPGLNQTQHQYQISYHCPGTEPHITTASLPSITLSDLQGGTQY
SVTVCTVLEDGKQSELVSTTLTTVLPAPDQLTVDSVDTTSAIVSWNQPPGLNQTQHPYQI
SYHCPGTEPHITITSSPSITLSDLQGGTQYSVTVCTVLEDGKQSELVSTTLTTVLPAPDQ
LTVDSVDTTSAAVSWSQPPGLNQTQHHYQISYRCPGTEPHITTTSSPSITLSDLQGGTQY
SVTVCTVLENGKKSQLVSTTLTTDSTWLSMKWIKLPFRNPGRKSVIPVPDQLTVNSVDTT
SAAVSWSQPPGLDQTQHSYQISYHCPGIKSHNIPTSSPSITLSDLQGGTQYSVTVCTVLE
NGKLSELVSTTLTTILPAPDQLTVDSVDTTSAAVSWNQPPGLDQTQHHYQISYRCPGTEP
HITTTSSHSITLSDLQGGTQYSVTVCTVLENGTKSERVSRTLTTVLPAPDQLTVDWVSIT
SAAVSWNQPPGLDQTQHHYQISYHCPGTEPHTTTTSSHSITLSDLQCDTQYSVTVCTVLE
NGKKSQLVSTTLTTVLPAPDQLTVDWVSITSSAVIWSQPPGLDQTQHHYQISYHCPGTEP
HITTTSSHSITLSDLQRDTEYSVTVCTMLENRKQSQLVSTTLTTVLPAPDQLTVDSVDTT
SAAVSWSQPPGLDQTQHHYQISYHCPGTEPHITTTSSHSITLSDLQRGTKYSVTVCTVLE
NGTQSQLVSTTLTTGPFLRELLSKTGLEDHYENKLTLSSVLEINADTTSDEPLTTMQSLP
GAFLKKLMMANVNARSVKCLTTDQVSYYDVDNLDTDSDSINVINPLDLITALFLCSDGFL
QQEMVQKMSMCQFAVPLLLPKCDTKQITLMLWALRDIVRKFRPSSQMATNAFVEDRLVVS
DIPMVSFVRLGESSLSKSQILNKLLSNPQQYHDTFVHHDMECGDVPRQISDGLVEINWYF
PCGNRNIDMFTKPVSVANLRGDIKSFETQFSFLCQTSAAVYIFIDDFEADLKVLDGKITK
TELFLVVNSQKETFRVDTLKKMITNYSINPTNVIVKKKQNDAEFVKTLQSSVGDIIEKSK
NRLTIENMATVARQSKILIDEDSDECQSARKMADKITSNIKDTITFKDQQLPLQGTIWKE
LSQLEKERCRLRKAGDQNIEHYKSSLKKKEIELRKKQYTFDMSDVMASFILGMSKSGPER
SYFLKWMRINLDNLSRQNLSGLRDRYKKLCQHSQEKKDEIKDLDKQLSDCSLGLEHFLRE
LGQLYEAACSLPEDSPQRKQMEHLPGLCAQMLLDGFPIELVDGDASNIPLKWISAVLTQL
HTLVDSNSKIRVVTVLGVQSTGKSTLLNTMFGVQFAVSSGRCTRGAFILLIKVNKELKEE
LKCDFIMIIDTEGLKSPELAQLDDSYEHDNELATLVIGLSDVTIINIAMENSTEMKDILQ
IVVHAFIRMKEVGKKPVCHFVHQNVSDMSAHDNNMRDRKKLLEQLNEMTQAAARMEKKEN
ITKFTDVMEYDPDTSCCYIPGLWHGTPPMAPVNAGYSEAVYNFKKTLMKDFRICQRNDDM
THFLKWTQTLWEAVKFEKFIFSFRNSLVADAYSRLCSEYNGWEWAFQKEMYRWMMSSETK
ISNIGVTDQHPQRSIRDVLQDLIIEASGKLSEGEKEIQDNLVKYFEKQDGHVNLVEKYKE
DFVSSAKTLRKEIENTVKNKLNGFVEIKEGMTELDIIKRSQTSTMEKQVLTLLQNCRQKE
FVLSDEALSEEFENIWRKTLSDIHFNGLPSRDVAQDAFLMLRDNLTTRGSHVNKMVVGNS
LVDCGRKAFVVESESWCQQAKNIAKHLDPDHHRKKRQDLCDDIIKQCLEFMTQRVKSKTD
YHDTHIKELLRIIDQTLQQHTQVKASEECEVSLKQHICGRAAREFQKMHDDFIEVNDPRK
CLELSKNKYLTEFRDLFHNRDQCLKKAKDFTKLCLQPAVQDYVTKMIGPDVVDEVKTGEG
SEDYSTRGAFQFSILKQLLMDGEYEKYREYINHYEQFVKDWLFDQIVQRLSKDNGLKKLE
IKHLSEIVQIIIAAISNVSKKNVNDMKMFINNICDALGEKLVFPKDALDSILMLILQDAN
TKQFAVYLKEFVGEMEQSLAAEYNKGVDIKERLRSLPFKPHDEMFTSLFGCGKQCPFCGV
PCEAGGKEHKNHHASIHRSEGINGYRDHYSNKLVIEICSSLVVSDTSFSNTETGGTFHPY
KDYQTYYPDWLITGDSSIEASDYWKYVMATFNETIAKGKHALPADIPEDWKALTRDDALK
SLKKSFNMK
NT seq
8130 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcctgatgatgaggagttaccaggttcaacgggtggtgaaggggacggaaat
gacactacacccgttcacagcacaggcccacctgatagcacaccagatattgtagcaatg
ctacagggcttcatgttgaatcaacagcagtcaatgcaagctgtgcagcagcagatcagc
cagctacaggaggaggtgcagaaaggaaagacaaagcaactgtgtgttgtgacccctctg
gcagcagcaaacccagacactttgacaagaccagctcctcagtcaccagcagaggtatta
agtgaacaccttgacaaggaggaggaagcagagaggaactttcaagagaaagagccactg
acacaagccagagatgagtcaaaaccagaggaggatggttcttcaggagaaaacatcgaa
acaacccaagtacttcctgctccagaccagctgactgttgactcagtggacaccacatca
gctgctgttagctggaacaagccaccaggattggaccaaacccaacatcattaccagatc
tcctaccagtgtctagggacagaaccacacatcactaccacatcttcacacagcatcact
ctctctgacctgcaatgtggtactcagtactctatcaatgtctgtactgtgctggaaaat
ggaaagaaaagtcaactggagtcaacaaccctgtttacaatacttcctgctccagaccag
ctgactgttgactcagtggacaccacatcagctgctgttagctggaaccagccaccagga
ttggaccaaacccaacatcattaccagatctcctaccactgtccagggacagaaccacac
atcactaccacatcttcacacggcatcactctctctgacctgcaatgtggcactcagtac
tctgtcactgtctgcactgtgctggaaaatgaaaagcaaagtcaactggtgtcaaaaacc
ttcaccacaatacttcctgctccagaccagctgactgttgactcagtagacaccacatca
gctgctgttagctggaaccagccaccaggattggaccaaacccaacatcattaccagatc
tcctaccactgtccagggacagaaccacacatcactaccacgtcttcacacagcataact
ctctctgacctgcaaggtggtactcagtactctatcaatgtctgcactgtgctggaaaat
ggaaagcaaagtgaactggtgtcaacaaccctcaccacagtacttcctgctccagaccag
ctgactgttgactcagtggacaccacatcagctgctgttagctggaaccagccaccagga
ttgaatcaaacccaacatcagtaccagatctcctaccactgtccagggacagaaccacac
atcactaccgcatctttacccagcatcactctctctgacctgcaaggtggtactcagtac
tctgtcactgtctgcactgtgctggaagatggaaagcaaagtgaactggtgtcaacaacc
ctcaccacagtacttcctgctccagaccagctgactgttgactcagtggacaccacatca
gctattgttagctggaaccagccaccaggattgaatcaaacccaacatccgtaccagatc
tcctaccactgtccagggacagaaccacacatcactatcacatcttcacccagcatcact
ctctctgacctgcaaggtggtactcagtactctgtcactgtctgcactgtgctggaagat
ggaaagcaaagtgaactggtgtcaacaaccctcaccacagtacttcctgctccagaccag
ctgactgttgactcagtggacaccacatcagctgctgttagttggagccagccaccagga
ttgaaccaaacccaacatcattaccagatctcctaccgctgtccagggacagaaccacac
atcactaccacatcttcacccagcatcactctctctgacctgcaaggtggtactcagtac
tctgtcactgtctgtacggtgctggaaaatggaaagaaaagtcaactggtgtcaacaacc
ctcaccacagattccacttggctttcaatgaaatggattaagttgcctttccgcaatcca
ggcagaaagtcagttattcctgttccagaccagctgactgttaactcagtggacaccaca
tcagctgctgttagctggagtcagccaccaggattggaccaaacccaacatagttaccag
atctcctaccactgtccagggataaaatcccacaacattcccacatcttcacccagcatc
actctctctgacctgcaaggtggtactcagtactctgtcactgtctgcactgtgctggaa
aatggaaagctaagtgaactggtgtcaacaaccctcacaacaatacttcctgctccagac
cagctgactgttgactcagtggacaccacatcagctgctgttagctggaaccagccacca
ggattggaccaaacccaacatcattaccagatctcctaccgctgtccagggacagaacca
cacatcactaccacatcttcacacagcatcactctctctgacctgcaaggtggtactcag
tactctgtcactgtctgtacggtgctggaaaatggaacgaaaagtgaacgggtgtcaaga
accctcaccacagtacttcctgctccagaccagctgactgttgattgggtaagcatcaca
tcagctgctgttagctggaaccagccaccaggattggatcaaacccaacatcattatcag
atctcctaccactgtccagggacagaaccacacaccactaccacgtcttcacacagcatc
actctctctgacctgcaatgtgatactcagtactctgtcactgtctgcactgtgctggaa
aatggaaagaaaagtcaactggtgtcaacaaccctcaccacagtacttcctgctccagac
cagctgactgttgactgggtaagcatcacatcatctgctgttatctggagccagccacca
ggattggaccaaacccaacatcattaccagatctcctaccactgtccagggacagaaccc
cacatcactaccacatcttcacacagcatcactctctctgacctgcaacgcgatactgaa
tactcagtaactgtctgcactatgctggaaaatagaaagcaaagtcaactggtgtcaaca
accctcaccacagtacttcctgctccagaccagctgactgttgactcagtggacaccaca
tcagctgctgttagctggagccagccaccaggattggaccaaacccaacatcattaccag
atctcctaccactgtccagggacagaaccacacatcactaccacatcttcacacagcatc
actctctctgacctgcaacgtggtactaagtactctgtcactgtctgcactgtgctggag
aatggaacgcaaagtcaactggtgtcaacaaccctcaccacaggaccttttctcagggag
ctgttgtcaaagactggactagaagatcattatgaaaacaagctgacgttaagttctgtc
cttgagataaatgctgatactacatcagatgaacctcttaccactatgcagtcacttcca
ggggccttcctgaagaaattaatgatggcaaatgtgaatgctaggagtgtgaaatgtctg
accactgaccaggtttcctattatgatgtagacaacctggacactgactctgatagcatc
aatgtaattaatccactggacctgataactgccctgtttctgtgctcagatggtttcctg
cagcaggagatggtccagaaaatgtccatgtgtcagtttgctgttcctctcctgctgccc
aaatgtgacacaaaacaaatcactttgatgctgtgggccttgagggacatagtgaggaaa
tttagaccctcttcccaaatggccacaaatgcttttgtggaggacagacttgttgtctct
gatattcctatggtgtcctttgttaggttaggagagagcagcttgtccaagtctcagatt
ttgaacaagttgcttagtaaccctcaacagtaccatgacacatttgttcatcatgatatg
gaatgtggagatgtccctcggcaaatctcagatggtctggttgaaatcaactggtacttt
ccatgtgggaaccgaaacatagacatgttcactaagcctgtgtctgttgccaatctcaga
ggagacatcaagtcctttgaaacacagttctcctttctgtgtcaaacatcagctgcagtt
tacattttcattgatgattttgaggcagatctcaaggttttggatggaaaaatcacaaaa
acagagttatttctggttgtcaattctcagaaagaaacattcagggtggacacattgaag
aaaatgatcacaaactacagtatcaacccaacaaatgtgattgtgaagaagaagcagaat
gatgcagaatttgtcaaaaccctgcagtcatctgtaggtgacatcatcgaaaaaagtaaa
aacagattgacaattgaaaacatggctaccgtggctcgtcagagtaagattctgattgat
gaagacagtgatgagtgtcagagtgccaggaagatggcagataaaatcaccagtaacatc
aaagacacaattacattcaaagaccaacagctacccttacaaggaacaatctggaaagag
ctttcccagttggagaaagagaggtgtagactgaggaaagcaggggatcaaaacattgaa
cactacaagagctctctgaagaaaaaggagatagagctgagaaagaaacaatatacattt
gacatgtcagatgtaatggcaagcttcattttaggaatgtcaaaatcaggacctgagcga
tcctatttcctcaaatggatgcggataaatctggacaatctctcacggcagaacctgtct
ggtttgcgggaccggtacaaaaagctttgccaacattctcaggagaaaaaagacgaaatt
aaagatttggataagcaattatctgattgttccttgggtcttgaacacttcctgcgtgag
ttgggccagttatatgaagctgcctgctccctccctgaagacagtcctcaaaggaaacag
atggagcatctccctggattgtgtgctcagatgctgttggatggtttccccattgagctt
gtggatggagatgcatcaaatatccctctgaaatggatatcagctgttctgacacagctt
catactcttgtggactctaacagcaagatccgagttgttacagttttaggggtccaaagc
acagggaagtccactctcctcaacaccatgtttggggtccagtttgctgtcagcagtgga
agatgcaccagaggggccttcatactactgattaaagtcaacaaagaactcaaggaggag
ttgaaatgtgacttcatcatgatcattgacacagaggggttgaaatcaccagagttggct
caactagatgacagctatgaacatgacaatgaactggcaacactggtgataggactcagt
gatgtcactatcatcaacatcgccatggagaactccacagagatgaaagacattctacag
attgttgttcatgcttttatcaggatgaaggaagtggggaagaagccagtatgtcatttt
gtgcaccagaatgtgtcagacatgtctgctcatgataacaacatgagggacaggaagaag
ttgttggaacagttgaatgaaatgacccaggcagcagccagaatggagaagaaggagaat
atcaccaagttcactgatgtgatggagtatgatccagacacaagctgctgctacatccca
ggactctggcatgggactcccccgatggctccagtcaatgcaggctacagtgaggctgtg
tacaacttcaagaagaccttaatgaaagatttcagaatctgccagagaaatgatgacatg
acacatttcctgaagtggacacaaaccttgtgggaggcagtgaaatttgaaaaattcatc
ttcagtttcagaaacagcttggttgcagatgcctactccagattatgctctgagtacaat
ggttgggaatgggccttccagaaggaaatgtatagatggatgatgagtagtgaaactaaa
atatccaatattggagtgacagatcaacatccccagaggtccataagagatgtgctacaa
gacttaattatagaagcatctgggaaactgtcagagggagaaaaggaaatccaagacaat
ctagtaaaatactttgaaaaacaagatggccatgtcaatctggtggaaaaatacaaggag
gattttgtgtccagcgctaaaacactgagaaaggagatagaaaacacggtgaagaacaaa
ttaaatggatttgttgaaatcaaagagggaatgacagaactggacatcatcaaaagatct
cagacaagtacaatggaaaagcaagttctgactctgctgcagaactgtagacagaaagaa
tttgttttatcagatgaggccctcagtgaagagtttgaaaacatatggaggaaaactctt
tctgatatacacttcaatggactcccaagtagagatgtggctcaagatgccttcctcatg
ttacgtgataatctgacaacgagggggagtcatgtcaacaagatggtggttggaaacagt
ctggtggattgtgggagaaaagcctttgttgtggaatcagagagttggtgccagcaggct
aaaaacatagcaaagcacttggatcccgaccatcacaggaaaaaacgacaagacctctgt
gatgacatcataaaacagtgtctggagtttatgacccagagggtgaaaagcaaaactgat
taccatgacactcacatcaaagaactgcttagaataattgaccaaacattacaacaacac
acacaagttaaagccagtgaggaatgtgaggtttctctcaaacaacacatctgtggcaga
gcagccagagagttccagaagatgcatgatgattttattgaagtcaatgacccaaggaag
tgtctggaactgtctaagaacaagtaccttactgagttcagagacttgtttcataaccga
gaccagtgcctaaagaaagctaaggacttcacaaagctgtgtttgcagccagctgtacag
gattatgtgaccaaaatgattggtcctgatgtggttgatgaagtgaagacaggtgaaggg
tcagaggattacagcacccgaggggctttccagttctccattttgaaacagctactgatg
gatggagaatatgagaaatatagagagtacattaaccattatgaacagtttgtgaaggac
tggctgtttgaccagattgtccaacgactctcaaaggacaacggtctgaagaaactagag
ataaaacatctgtcagagatagtccaaatcataattgctgccatttcaaatgtcagcaaa
aagaatgtaaatgatatgaagatgttcattaacaatatttgcgatgctcttggagagaag
cttgtctttcccaaagatgctctggattccattctcatgcttattcttcaagatgcaaac
acaaagcagtttgctgtctacctcaaagagtttgtgggagaaatggagcagtcactggca
gctgagtacaacaagggagtggacatcaaagagagactcagatctctaccattcaagcct
catgacgagatgttcaccagtctgtttggctgtgggaagcaatgtcccttctgtggtgta
ccctgtgaagcaggggggaaagagcacaaaaaccaccatgcctccattcaccgttcagaa
ggtatcaatggttatagggatcattattcaaataaattagtaatagagatatgttcatct
cttgtggttagtgacacatcattctccaacactgagactggaggaacatttcacccctac
aaggactaccagacatattaccctgactggttaataactggagattccagcattgaggct
tcagattactggaagtatgtgatggccacattcaatgaaacaatcgctaaaggcaaacat
gcacttcctgctgatatcccagaggactggaaggcattaacacgtgatgatgcattgaag
agcttgaaaaagtcattcaacatgaaataa
DBGET
integrated database retrieval system
