KEGG   Salvelinus fontinalis (brook trout): 129841666
Entry
129841666         CDS       T11136                                 
Name
(RefSeq) WD repeat-containing protein 1-like
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
sfon  Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:sfon00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:sfon04990]
    129841666
Domain-containing proteins not elsewhere classified [BR:sfon04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   129841666
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 WD40_Gbeta Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_Aladin Beta-prop_WDR41 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st DSE1_N CFAP251_N Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_TEP1_C eIF2A Beta-prop_WDR35_TULP_N ASA1 PAC11 Beta-prop_NOL10_N Beta-prop_VPS8 NBCH_WD40 Beta-prop_EIPR1 PEP5_VPS11_N Tricorn_2nd WDR90_beta-prop_4th TRM82_WD Beta-prop_SPT8 Beta-prop_NUP159_NUP214 RMC1_N PROPPIN Beta-prop_RIG_1st Beta-prop_SCAP Beta-prop_ACSF4 Beta-prop_ELP1_1st Beta-prop_WDR11_1st DUF7165 WD40_RFWD3 Beta-prop_DCAF12 DNAI3_WD DUF5711 WD40_like HPS3_N
Other DBs
NCBI-GeneID: 129841666
NCBI-ProteinID: XP_055765983
LinkDB
Position
3:complement(25597967..25612517)
AA seq 606 aa
MSYELKHVFASLPQMERGVAKVLGGDPKGNNFLYTNGKSVIIRNINNPAIADIYTEHPHQ
VTVAKYAPSGFYIASGDVSGKIRIWDTTQKEHLLKYEYQPFGGKIKDIAWTEDSKRIACV
GEGREKFGAVFLWDTGSSVGEISGHSKVINSVDIKQTRPYRLISGSDDNCGAFFEGPPFK
FKFSITDHSRFVNCVRFSPDGNRFCTAGADGQIFLYDGKTGEKICALGGAKAHEGGVYAV
SWSPDSSQLISASGDKTVKLWDVGTSTALTTFNMGADVMDQQLGCLWQKDHLLSVSLSGY
INYLDKSNPDRPLRTIKGHSKSIQSLTVHKNGGRSYIYSGSHDGHINYWDAETGENNDFS
GKGHSNLVTKMAVDDADQLVTCSMDDTVRFTSVTKKEYSASNLVKMDVQPKHVSVAAGGL
ALAVCIGQVVFLKDKKKVFTLDSLDYEPEAGAIHPGGSTAAVGGADGKVRLYSVQGNTLK
DEGKSVEAKGPVTDMAYSKDGAYLAVTDEKKVVTVFTVADNYSVKNDFYGHHAKVVTLAW
SPDNEHFASGGMDMMVYVWTVNDADKRLKIPDAHRLHHVSGLAWIDEHTLVTTSHDASVK
QWTLKF
NT seq 1821 nt   +upstreamnt  +downstreamnt
atgtcatatgaattgaagcatgtatttgccagcctcccgcagatggaacgaggagtcgcc
aaagtcctaggtggcgatcccaaaggcaacaacttcctctataccaatggaaagagcgta
atcatcaggaacattaataaccctgccatagctgatatctacactgagcaccctcatcag
gttactgtcgccaagtacgcccccagtggcttctacattgcttctggagatgtgtctggt
aagatccgtatctgggacactacccagaaggaacacctgctgaagtatgagtaccagcct
ttcggggggaaaatcaaggacatcgcatggactgaggacagcaaaaggattgcttgtgtg
ggagagggacgtgagaagttcggggctgtgttcctgtgggacactggctcctctgtggga
gagatctcaggccactccaaagtcataaacagcgtagatatcaagcagactcgcccctac
cgtctgatctccggaagcgatgacaattgtggagccttctttgagggaccacctttcaag
ttcaagttctcaatcacagaccacagcaggtttgtcaactgcgtgcgtttctctccagac
gggaaccggttttgtacggctggcgctgacggtcagatcttcctgtacgacggaaagact
ggtgagaagatttgcgctctgggcggagccaaggcccatgagggaggagtctatgccgtg
agctggagccccgacagctcccagctcatctctgcctcgggcgacaagacggtgaagctt
tgggacgtaggcaccagcacggccctcaccaccttcaacatgggcgccgacgtcatggac
cagcagctgggctgcctgtggcagaaggaccacctgctcagcgtctccctgtctggttac
atcaactacttggacaaaagcaaccccgaccggccgctccgcaccatcaagggtcacagc
aaatccattcagtccttgacggttcacaaaaacggggggcgttcttacatctactcgggc
agccatgacgggcacatcaattactgggacgcggagaccggggagaacaacgacttctca
gggaagggccacagcaacctggtcaccaagatggctgtggacgatgctgaccagctggtg
acctgcagcatggacgacacggttcgcttcaccagcgtgaccaagaaagaatacagtgct
tccaacctggtaaagatggacgtccaacctaaacatgtgtcagtagcagcaggggggctc
gctttggctgtgtgcatcggacaggtggtgtttttgaaagacaagaagaaggtgttcacg
ctggacagtctggactacgagccggaagcaggagcaatccacccagggggcagcactgcg
gcagtgggcggggcagatggaaaggtccgcttgtattctgtccaaggcaacactctgaag
gacgaggggaagagcgtggaggccaaggggccagtcacagacatggcctactccaaagat
ggcgcctacctggccgtcactgacgagaagaaggtcgtcacagtcttcacagtggcagac
aattactcggtcaaaaatgatttttatggccaccacgcaaaagtggtcaccctggcctgg
tctcccgacaatgagcactttgccagtggtgggatggacatgatggtctatgtttggaca
gtgaatgacgcagacaagagactgaagatcccagatgcccacaggttgcaccatgtcagt
ggcctggcctggatagatgagcacactctagtgaccacctctcatgacgccagcgtcaag
cagtggactcttaaattctga

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