Salvelinus fontinalis (brook trout): 129841894
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Entry
129841894 CDS
T11136
Name
(RefSeq) integrin alpha-10-like
KO
K06586
integrin alpha 10
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04510
Focal adhesion
sfon04512
ECM-receptor interaction
sfon04810
Regulation of actin cytoskeleton
sfon04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129841894
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129841894
09142 Cell motility
04820 Cytoskeleton in muscle cells
129841894
04810 Regulation of actin cytoskeleton
129841894
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfon04515
]
129841894
Cell adhesion molecules [BR:
sfon04515
]
Integrins
Integrin alpha subunits
129841894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_1
Integrin_A_Ig_2
Integrin_A_Ig_3
VWA_2
FG-GAP_3
FG-GAP_2
ITGAX-like_Ig_3
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
129841894
NCBI-ProteinID:
XP_055766216
LinkDB
All DBs
Position
Unknown
AA seq
1170 aa
AA seq
DB search
MELHKYLLLLKLIVLLKGLCECFNIDVKRPRIYTGPEEALFGFSVLQHDNAGDKSMLVGA
PWDGPSNTRRGDVYKCLVGEERSSNCTKTNLGESTLQNVSRNLKNSHLGMTLTPDSPDGF
LACAPLWSQECGTSVFSTGICASVSDDLEPRETIAPTAQRCATYMDIVIVLDGSNSIYPW
YEVQNFLSNILSKFHISPEQMQVGVLQYGEVAVHEWSLRDYQTTQEVVEAAKNISRQEGR
ETRTAYAIHMGCTEAFSPERGAREGATKVMIVVTDGESHDGEELPDALEECEKRNITRYA
IAVLGHYIRRQQDPETFISEIKYIASDPDDKYFFNVTDEAALNDIVDALGDRIFTLEGTL
GYNESSFKFEMSQIGFSTHVLDDGILFGMVGAYDWDGGVLKEGAEGRIMPTREAFESEFP
QELKNHAAYLGYTVSSVIVGDWRRLYVAGAPRFKHKGKVILFELSNNGDVNIAQALNGEQ
IGSYYGSEVCGLDVDQDGITDVLLVAAPMYLGPGNKEAGRVYIYSLSAEEVFVSNGTLKA
EDRSQDARFGYALASAPDLNHDGYTDLLVGAPLEDGHNGAIYVYHGQGIHIIHNYKQRIA
GSSLSPSLQYFGRSVSARLDLDGDGLLDLTVGAQGSAVLLSSRNIVQINMSLSFQPHSIN
VIQKTCQRGGRESACLNATACFLALSRSPGTHSNSFELSVVAMLDERKLTARALFDDSNQ
RQSQLGVRVHTGQTVCHNLPFHVFDTADYIRPISFSLRFKINDTESGPVLDEGWPTTFKR
SIAFFKDCGEDDVCVTDLVLQAHMDISGTRLQPYVIRSPRRRLAVEVQLQNRLENAYNTS
LSLHYSRNLHFSSLSIREDTQLKIECTSLSSNSHSCNVSYPVFRSHSKVNFMLEFEFSCT
SLLSKVQMKLTVASDSVEREATLGDNSVQLQTVVQYEPDLFITSDTNLNRYEVHPTRTIS
EAIGPEFYTHFRLQNLGCYSVSNLELRLSLPSVAAGDRIFMAVTEVFSYNVTGVNCSVDS
DVSQLKDRQRDVRPLHPEDMQQTDLLNCSRSWCVEVVCEVQQLHRGQTALIRVSRRVHDN
FFRQAKFKVVRIVSAYRLAAQESNLVTLGSGTIWRETVLEVLKGRAIPISLWILIGSIIG
GLLLLALIIFAMWKLGFFTRKQIKDEELED
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcacaaatacctgctactcctcaagttaatagttctcctcaaagggttgtgt
gagtgtttcaacatcgatgttaagcggcctcgtatctacactggtccagaggaggccctg
tttggtttctctgtgctacagcatgacaatgcgggggacaaatcgatgctggttggtgct
ccttgggatggaccttccaataccaggagaggagacgtgtacaaatgcctcgtgggagag
gagaggagctccaactgcaccaaaaccaacctaggtgagagcacgttacagaatgtatct
agaaacctgaagaactctcatctaggaatgaccctcactccagactcacctgatggattc
ctggcgtgtgcgcccctgtggtctcaggagtgtggtacgtcagtcttcagtacggggatc
tgtgcttctgtcagcgacgacctggaacctagagagaccatcgcccctacagcacagaga
tgtgcaacatacatggacatagtgatcgttctggatggctccaatagtatctatccctgg
tatgaagtccagaacttcctcagtaacatcctcagcaagttccatatcagcccagaacag
atgcaggtgggggttttgcagtacggtgaggttgcggtccatgagtggtcactgagagac
taccagacaacacaggaggtggttgaagcagctaagaacatcagccgacaggaggggcgg
gagacacgcacagcatacgccatccacatgggctgcacggaggcattcagccctgagcgg
ggggcgagggagggggccaccaaggtcatgatcgtggtgacggacggagagtcacatgat
ggggaggagctaccagatgctcttgaggagtgtgagaagagaaacatcaccagatatgcc
atcgctgtattgggtcactacatccgcaggcagcaggacccagagacgtttatcagtgag
atcaagtacattgccagcgaccctgacgacaaatacttcttcaacgtgactgatgaggcg
gcgctcaacgacatcgtagatgcactaggagaccgcatcttcactctagaggggacgctg
gggtacaacgagagctccttcaagtttgagatgtcccagatcggcttctccacacacgtt
ctcgatgatggcatcctgtttgggatggtgggggcgtatgactgggacggaggggtgctg
aaggagggagctgagggccgcatcatgcccaccagagaggcctttgagtcagagttcccc
caggagctcaagaaccacgctgcctatctgggctacacagtgtcgtcagtgatagtggga
gactggaggaggctgtatgtggctggagctcccaggttcaaacacaaaggaaaggtcatt
ctgtttgaactgagcaacaatggagatgtcaacattgcacaggccctcaatggagaacag
attgggtcgtactatggcagtgaggtgtgtgggttggacgtggaccaggatggcattact
gatgttctgctggtggcagcacccatgtacctgggccctggcaacaaggaggcaggcaga
gtctacatctactccctcagtgcggaggaggtgtttgtgtctaacggtactctgaaggca
gaggataggtcccaggatgctaggtttggctacgccctggcctccgccccagacctcaac
catgacgggtacactgacctgctggtgggggcacccctagaggatggacacaatggggcc
atatacgtataccacggccagggcatacacatcatccacaactacaaacagcgtatcgca
gggtcgtccctgtccccctctctgcagtactttgggcgcagtgtgagtgccagattggac
ctggatggagatggtctgttagacctgactgtgggggcccagggcagtgctgtactactc
agttctcgtaatatagtccagatcaacatgagtctgtccttccagccccactccatcaac
gtcatccagaagacgtgtcagagaggagggagggagtctgcctgtctcaacgctacagcc
tgcttcctggctctgtcccgctcccctggaactcacagcaacagctttgagctgtcggtg
gtggccatgttggatgagagaaagttgacagcgagggcgttgtttgacgacagcaaccag
agacagtcacagctgggggtcagagttcacacaggacagaccgtctgccacaacctgccc
ttccatgtgtttgacacagctgactacatccgtccaatcagcttctccctgcgctttaag
atcaacgacacagagagcggcccagtgctggacgaaggctggcccaccaccttcaagaga
tcgattgcgttcttcaaagactgtggtgaggatgatgtgtgtgtcactgatctggtgctg
caggctcatatggacatctctgggacaagactgcagccctatgtgatccgtagccctcgc
agacgtctggctgtagaagtccagctgcagaacagactggagaacgcctacaacaccagc
ctatcgctgcactactcacgcaacctccacttctctagtctcagtatacgggaggatacc
cagttgaaaattgagtgtacatctctcagttccaacagtcattcctgtaatgtcagctat
cctgtgttccgctcccactccaaggtgaacttcatgttagagtttgagttcagctgtacg
tctctgctcagtaaagtccagatgaaactcacagttgccagtgacagtgtggagagagag
gctacgttgggagacaacagtgttcagctccagactgtggttcagtacgaacctgacctc
ttcatcaccagtgacaccaatctgaaccgttatgaggtccacccaaccagaaccatatca
gaggcaataggaccagagttctacacacacttcaggctgcagaacctgggctgttacagt
gtgagtaacctggagttgaggctgagcctgccctctgtagcagctggagacagaatcttc
atggctgttactgaggtcttctcttacaacgtgacaggggtgaactgcagtgtagacagt
gacgtgtcccagctgaaggacagacagagagatgtacgaccactacatcctgaagacatg
caacagactgacctactgaactgcagcaggtcgtggtgtgtggaggtggtgtgtgaggta
cagcagctgcatcgaggacagaccgctctcatacgagtcagccgcagggtccacgacaac
ttcttcagacaggctaagtttaaggtggtgaggatagtgagtgcctatcgtctggctgct
caggaatctaacctggtcactcttgggagtggcaccatctggagggagacggtgttggag
gtactaaaggggcgggccatccccatttctctctggattttgataggtagcattattgga
gggcttctgctattggccctcatcatcttcgcaatgtggaagctggggttcttcactcgt
aaacagataaaggacgaggaactcgaggactga
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