Salvelinus fontinalis (brook trout): 129841905
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Entry
129841905 CDS
T11136
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129841905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfon03041
]
129841905
Spliceosome [BR:
sfon03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
129841905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
129841905
NCBI-ProteinID:
XP_055766238
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
MSLADELLADLEEAGDEGEDGLYPGEEGESDGEGQAEGGLEDIPEEMEVDYSGAESVSSI
AKLRNSKQFSEIMDNIAIYVEKQRKNSEVSGPVEADPEYKLIVAANNLTVEIENELNIIH
KFVRDKYSKRFPELESLVPNSLDYVRTVKELGNNLDKCKNNENLQQILTNATIMVVSVTA
STTQGTMLGEDELKRLEEACDMALELNQSKHRIYEYVESRMSFIAPNLSVIVGASTAAKI
MGIAGGLTNLSKMPACNLMLLGTQKRTLSGFSSTAVLPHTGYIYHCDVVQTLPPDLRRKA
ARLVSAKCTLASRVDSFHESADGKVGYDLKEEIEKKFDKWQEPPPVKTVKPLPAPLDGQR
KKRGGRRYRKMKERLGLTEIRKHANRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRVRQAQ
VNEATKARISKSLQRKLQKQNMTYGGRSTVGGRSTVSSRSTVGGRSTVGGRSSVRDNSSG
TSSSVAFTPLQGLEIVNPHAAEKKVAEANQKYFSNMAEFLKVKKEGEGK
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggctgatgagctcctggctgatctggaggaggcaggggatgagggggaggat
gggctgtacccgggggaagagggggagagtgatggggagggacaggcagagggaggtttg
gaggacatcccagaggagatggaggtggactacagcggagctgagagtgtctcgtccatc
gctaaactacgcaacagcaaacagttctcagagatcatggacaacattgcaatctatgtc
gagaagcagcgcaagaactctgaagtctccgggccggtggaggcagacccagaatacaag
ctgatcgttgctgccaataacctcacagtagaaattgagaacgagctgaacatcattcac
aagtttgtacgtgacaagtattctaagaggttccctgagctggagtccctggtgcccaac
tctctggactacgtccgcactgtcaaggagctggggaacaacctggacaagtgtaagaac
aacgagaatctgcagcagatcctgaccaacgccaccatcatggtggtcagcgtcacagcc
tccaccacacaggggacgatgctgggtgaggatgagctgaagaggttggaggaggcctgt
gacatggcgctagagctgaaccaatcaaaacacaggatctatgaatatgtggagtccagg
atgtcgttcatcgctcctaatctgtcagtcatcgttggcgcctcgaccgcagccaagatc
atgggtattgctgggggcctgaccaacctgtctaagatgccagcctgtaacctgatgcta
ctgggaacccagaagaggaccctgtcagggttcagcagcaccgctgtgctcccacacacc
ggctacatctaccactgtgatgtggtccagactctacccccggacctgaggagaaaggca
gcacgtctggtttcagctaagtgcactctggcatcccgagtggacagcttccacgagagt
gcagacggcaaggtgggctatgacctgaaagaggagatcgagaagaagtttgataaatgg
caggagcctccaccggtgaagactgtcaaacccctgccagcaccgttggacggacagagg
aagaagagaggagggcggaggtatcgtaagatgaaggagcgtctgggtctgacagagatc
aggaaacacgccaacaggatgaccttcgcagagattgaggatgatgcgtaccaggaggac
ctgggtttcagtctgggccagctggggaagtcgggcagcggacgcgtcagacaggctcag
gtcaacgaggccaccaaggccaggatatccaagtccctacagaggaagctgcagaagcag
aacatgacgtacggcggcaggtccacagtcggcggcaggtccacagtcagcagcaggtcc
acagtcggcgggaggtctacagttggcgggaggtcctcggtcagagacaactcctcagga
acaagttccagcgtagccttcactccactacagggactggagatcgtgaacccgcatgca
gcagagaagaaggtggctgaggcaaaccagaaatacttctccaacatggcagagttcctc
aaggtcaagaaggagggagagggaaagtga
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