Salvelinus fontinalis (brook trout): 129841915
Help
Entry
129841915 CDS
T11136
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
sfon
Salvelinus fontinalis (brook trout)
Pathway
sfon04020
Calcium signaling pathway
sfon04080
Neuroactive ligand-receptor interaction
sfon04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
129841915
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129841915
04082 Neuroactive ligand signaling
129841915
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129841915
Ion channels [BR:
sfon04040
]
Ligand-gated channels
Glutamate (ionotropic)
129841915
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
129841915
NCBI-ProteinID:
XP_055766252
LinkDB
All DBs
Position
Unknown
AA seq
1967 aa
AA seq
DB search
MVAIPTLSLLLALAEWAGPVTPSPHLLLRPRERERDPGTIMNFNIAVIHAGASVQVEAAA
GPGGRVLYPGFGRAHSSLGESVITQWGSANVIWLQVNDSSPKTLLSQLCDLLAARPLQGL
VYEEERPPPTAWGPLAPMLEFVSAQTGLPIVAVGGGAGLGRMQQESGSIFLQFSSSTSLQ
LEVIFKILEEYDWTTFSVVSTRHHGYQDFLSVVDGLTDGSFIGWEKKSVVMLNVTDDPGG
ARTRRLLKENEAQVRLLYCSQEEAELVFKAAWAAGQAGPSHMWFAVGPALSGLGMEGLPR
ALFAVRPQGWKDKPRMRIARGVSILTHGAVALRRDYGASGGPNFVTNCMTESNQTHRVRG
RMRYFSNITLGGRDYSFDSDGYLANPVLEVISYTPGKGWEDVGMWENGKLDLVYPAWSRY
GPFLQPPDGAQHLRVVTLEERPFVIVELADAASNTCIRDSVPCRRPLNASIPVQDPPKKQ
CCKGFCIDILKRLAKIVGFTYDLYLVTNGKHGKKIDGVWNGMIGEVVGQRADMAIGSLTI
NEERSEVVDFSVPFVETGISVMVSRSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVF
IFEFFSPVGYNRSLSSGKKTGGSTFTIGKSVWLLWAIVFNNSVPVENPRGTTSKIMVLIW
AFFAVIFLASYTANLAAFMIQEEYIDTVSGLSDKKFQHPTEQYPPLKFGTVPNGSTEKNI
RSNYPGMHHYMVKYNQRGVEDAINNLKTGKLDAFIYDAAVLNYMARKDEGCKVMTIGSGK
VFATTGYGIALHKNSRWKRPLDLALLQLVGDDEIEMLERLWLSGICHNDKIEVMSSKLDI
DNMAGVFYMLLVAMGLSLLVFAWEHLVYWRLRHCMATSSGRLDFLLAISRGMYSCCSFED
ETTPGGAKSSMAMLPHHHGTMVTVPPPPHLVSASSTNPALTMAQQQQQQQSQPVYKTQLP
GSPPTVVHSGTALGPSNTPMLGAPLPCSTFLPRPDRRLAVVDRWRLPKAGTATNPMAVRG
AVADMGPFPQKVAPTWGTTAGGVGVGGGGGGGGGGGLDGYKRYYGPIDPEGLGPCMDQPA
GSQTPKTAPRSHPQPPPATVAFYSEKGPDQGVGKRVEGGGGAGCQGKGGVKPWTPRLPPK
SQAVGVTPVPLPTNPPLPQPSPPLPSSFWRKRRPKKPKEPGGPLYENILPLGRRGGGRDG
ARDGGGRRGRPLSPPLPLPVTMPMSPTYTPPSPSTSLPYTSSTSSSSSNTSSTSSSTSSS
RSSSPSSSSSLTSQSTQEGLDAEEDDEDEELTEESSLLLGRGRDRQRSIISSRSLSHGRQ
PPPIPPRKPRPARGERERERERGGSQLAQLQEWWAGWGERERDRSGGGGDDERKREKKRR
KDKEKKKKKKKRKKREERERERDKERKRRKVKKKRKKKALKTKKRKKSTGRSEQEEGDVE
ADREGEGDGGREGGMPDYSSFPTQYRSTFGEKGRDSAWAGERERGRREGEEEEGGDREED
SSRSRERQPKSSRSHSRHRPPSKHYPKLPSSVKFWVSGGNGEGGDPNSGTPPSSLPPLIP
LSKRRRSGGVERREGGREGEKRPLLMHYEKGRANTQEGLSFHEWDSEEDDEQDVEEERQR
DRARERVEEKVRRAGGRGAVSESERDRARAEESYSDEGSSGEFGRFERYWEGREGREGSG
GAGGPGNSGIGGIGGGSWFFGTYPSREKGGSINSRDDSILGRVEGWGGAGGDSWGSGPGV
GWSSGGGSGGLGSQWPPPPANHPLPRRYWSVDKLPMKGEKKWKRGGRGKGKGRARDRNQG
SGVSCSCSQYPHPHVHPHPQGRSHGHGKRGSTALSHSQEELLPHCHSFSGGSRPKPPPKP
DQGQAKSGSQASLSTQQPGGIVDHPPQPSLSPPQPLPSAPSSSSSLPVPIPPPPSSSSAS
ASAKLLYQRLRSVPQPGRFYSPHLPLKAKSLCSRRGSAHFSSLESEV
NT seq
5904 nt
NT seq
+upstream
nt +downstream
nt
atggtcgccatacccaccctctctctcctattggccctggcggagtgggcaggaccggtc
acgccctccccacacctcttgctccgcccccgggagcgggagagagacccggggactata
atgaacttcaacatcgctgtgatccacgcgggggccagcgtgcaggtagaggcggcggcc
gggcccgggggaagggtgctctaccctgggtttggccgggcacacagctccctgggggag
agcgtgatcacccagtggggctctgctaacgtcatctggcttcaggtgaatgacagtagt
cctaagactctgctgtcccagctgtgtgacctgctggcagcgaggcccctacagggcctg
gtctacgaggaggagaggccaccacccaccgcctggggacccctggcccccatgttagag
tttgtctctgcccagactggactacccatagtggctgtaggcggaggagcagggctgggg
aggatgcaacaggagtcaggctccatcttcctccagttcagctcatccaccagcctccag
ctggaggtcatcttcaaaatactagaggagtacgactggaccaccttctcagtggtgtcc
acccgtcaccatggctaccaggacttcctgtcggtggtggacggcctgacggacggctcg
ttcatcggctgggagaagaagagcgtggtcatgctgaacgtgacggacgacccgggaggg
gcgcgtacgcgcagactgctcaaggagaacgaggcgcaggtacgtctgctctactgttcc
caggaggaggccgagctggtgtttaaagcagcctgggccgcaggtcaggctggaccctct
cacatgtggttcgctgtggggccagccctgtccggccttggcatggagggtcttcccagg
gccctattcgccgtgcgtccgcagggctggaaggacaagccccgcatgaggatcgcccgg
ggcgtgtccatactgacccacggagcggtggcactgcgccgtgactatggggcctctgga
gggccaaactttgtcaccaactgcatgacggaatccaatcaaacacacagggtgcggggg
aggatgaggtatttcagcaacatcacgttgggtggcagagactactctttcgacagtgac
ggatacctggccaaccccgtcctagaagtaatctcctatacacctggcaaaggctgggag
gatgtagggatgtgggagaacggtaagttggatttggtttatccagcgtggtcgcgttac
ggtccattcctccaaccgcctgatggcgcccagcacctgcgcgtggtcactctggaggaa
cgtccgtttgtcatcgtggagctggctgatgccgcctccaacacctgcatcagagactct
gtaccctgccgacgacccctcaacgccagtattcctgtccaggatcccccaaagaaacag
tgctgtaagggcttctgcatcgacatcctcaaacgattggccaagatcgttggtttcacc
tatgacctctacctggtgaccaacggaaagcacgggaagaagattgatggagtgtggaac
ggcatgattggagaggtggtgggacagcgtgcagatatggccatcggatccctcaccatc
aacgaggagaggtcagaggtcgtggacttctcagtccccttcgtggagacgggcatcagc
gtcatggtctcccgtagcaacggaaccgtctcaccctctgccttcctagagccctacagt
ccagcggtgtgggtgatgatgttcgtcatgtgcctgaccgtggtggctgtgactgtcttc
atatttgagttcttcagtccagttggctacaaccgcagcctttccagcggaaagaagaca
ggaggctctacgttcaccataggaaagtctgtgtggttgctgtgggccattgtgttcaat
aactcggtcccagtggagaaccccagaggaaccaccagtaagatcatggtgctgatctgg
gccttcttcgctgtcatcttcctggcttcctacacagccaacctggctgccttcatgatc
caggaggagtacatagacactgtgtctggactctcagacaaaaagttccagcaccccaca
gagcagtacccccctctgaagtttggcacggtgcccaacgggagtacagagaagaacatc
cgcagtaactaccctggcatgcaccattacatggtcaaatataaccagagaggggtggag
gacgccattaacaacctcaagactgggaagttggatgcctttatctacgatgcagctgtg
ttgaactacatggccaggaaagacgagggttgtaaggtgatgaccataggctctgggaag
gtatttgccaccacaggctacggtatcgccctgcacaagaactcccgctggaaacgcccc
ctcgacctggccctgctgcagctggtgggagacgatgagattgagatgctggagcgtctg
tggctgtctggtatctgtcacaatgacaagattgaggtgatgagcagtaagctggacata
gacaacatggcgggtgtcttctacatgctgctggtggctatggggctcagtctgctggta
tttgcctgggagcacctggtctactggaggctcagacactgcatggctaccagctctggg
agactggacttcctactggccatcagtaggggcatgtacagttgttgtagctttgaggat
gaaaccacgccgggcggggccaaatcctccatggctatgctaccccaccatcatggcacc
atggtaacagtcccgcccccgccacacttggtcagtgcgtcgtcaaccaacccggccctg
accatggcgcagcagcaacagcagcaacagtcacagcccgtctacaaaacacagctacct
ggatcccctcccaccgtggtacattctggaacggcgctgggaccctccaacactcccatg
ctgggggcgcccctgccctgctccacattcctcccccggcccgatcgcagactggctgtg
gtggaccgctggaggctgcccaaggccgggaccgccaccaaccccatggctgtccgcggg
gccgtcgcagacatgggacccttcccccagaaagtggctccgacctggggcacgacagct
ggaggagtgggggttggtggtggtggtggtggtggtggtggtggggggctggatggatat
aaacgctactatggacccatcgaccctgagggtctggggccctgtatggaccagccggca
gggtcccagacccccaaaacagcccccaggagtcaccctcaacctcctcctgccactgtg
gccttctactcagagaaaggtcctgaccagggggtggggaagagggtggagggaggtggt
ggtgctgggtgtcaggggaagggaggggtcaaaccttggacgcctcggctgcctcctaaa
agccaagccgtgggcgtgaccccagtccctctgcccactaaccccccgctgccacaaccg
tccccccctctcccctcatccttttggaggaagcgccggcccaagaagcccaaagagcca
ggcgggcctctgtacgagaacatcctaccactggggcgcaggggaggaggaagggatgga
gcgagggacggtggagggaggaggggacgccccctctctcctcctctcccgctccccgta
accatgcccatgtcccccacctacactcccccttccccctccacctcactcccctacaca
agctcaacttcctcctcttcctctaacacatcgtccacctcttcctctacctcctcctct
cgctcctcctctccttcctcctcctcctccttgacctctcagagcacgcaggaaggtttg
gacgcagaggaggatgatgaggatgaggagctgacagaggagtccagtcttctcctgggg
agggggagggacagacagcgttcaattatctcctctcgctctctcagtcacgggcgccag
ccaccacctataccaccccgaaaaccacgccctgcccgaggggagagagaaagggagagg
gagagaggaggtagccagttggcccagttacaggagtggtgggcgggctggggtgagaga
gagagggatcgcagtggaggaggaggagatgacgagaggaaacgagagaagaagaggagg
aaagataaagagaagaagaaaaagaagaagaagaggaaaaagagagaggagagggaacga
gagagagacaaagagaggaagagacggaaggtgaaaaagaagcggaagaagaaggcgctg
aagacgaagaagaggaagaaatcgactgggcgttccgagcaagaagagggggatgtggag
gcagatagggagggagagggggatggagggagagaaggagggatgccagactactcttcc
tttccaacccagtatcgtagtacgtttggggagaaagggagagattcagcatgggcagga
gagagggagcgaggaaggagggagggagaagaggaagaggggggtgatagagaggaggat
agcagcaggagcagggagaggcagcccaaatcatcccgttcccactccagacatcgaccc
cccagtaagcactaccccaaactcccctcctcggtcaagttctgggtgagcggaggaaac
ggggaagggggggaccccaactctggaacacccccctcctccctccctcccctcatccca
ctctccaagaggcggaggagtggaggggtggagagaagggagggagggagagaaggagag
aagaggcctctgttgatgcactatgagaaaggcagggctaacacccaggaggggctctcc
ttccatgagtgggactctgaggaggatgatgagcaagatgtggaggaggagaggcagaga
gacagagcgagggaacgggtggaggagaaggtgaggagggcgggtgggagaggtgctgtg
tcagagtcagaaagagacagggcgagagcagaggagagttactctgatgagggctcatca
ggggagtttgggcgatttgagaggtattgggaggggagggaggggagggaggggagtggg
ggggctggaggtccagggaatagtgggataggggggatagggggagggagctggtttttc
ggcacatacccctccagagagaaagggggcagcatcaacagcagagacgactctatacta
gggcgagtggagggctgggggggggcggggggagattcttggggttcagggccaggagta
gggtggtcgtcagggggagggagtggaggtctggggtcccagtggcccccccctccagca
aaccacccgctcccccgacggtactggtctgtggacaaactcccaatgaagggagagaag
aagtggaaaaggggaggaagggggaagggcaagggacgcgctcgagacagaaaccagggg
tcaggggtgtcatgttcatgtagccagtacccacacccccatgtgcaccctcacccccaa
gggcggtcacacggccatgggaagagaggaagcacggccctgtcccacagccaggaggag
ctgctcccccactgccacagcttcagcgggggctcacggcccaaaccccctcccaaacca
gaccagggccaggccaagtcaggcagccaggcaagcctcagcacacagcagccaggaggg
atagtggaccacccccctcagccctccctctcgccccctcaacccctacctagtgcccct
tcctcatcctcctccctgccggtgcccatccctcctcctccctcctcgtcctctgcctcg
gccagtgctaagctcctgtaccagagactacggtcagtgcctcagcccggacgcttctat
tccccccacctgccactcaaggccaagagcctatgctcccgacgaggctccgcccatttc
tccagcctggagagcgaggtatga
DBGET
integrated database retrieval system
