Salvelinus fontinalis (brook trout): 129842083
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Entry
129842083 CDS
T11136
Symbol
chrna6
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-6 isoform X1
KO
K04808
nicotinic acetylcholine receptor alpha-6
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04080
Neuroactive ligand-receptor interaction
sfon04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129842083 (chrna6)
04082 Neuroactive ligand signaling
129842083 (chrna6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129842083 (chrna6)
Ion channels [BR:
sfon04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
129842083 (chrna6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Red1
Motif
Other DBs
NCBI-GeneID:
129842083
NCBI-ProteinID:
XP_055766448
LinkDB
All DBs
Position
Unknown
AA seq
519 aa
AA seq
DB search
MNQAARGTLLLLVFVLIMQDCFSSKGEDRLFRRLFRSYNQFIRPVENVSDPVTVEFEVSM
SQLVKVDEVNQIMETNLWLRHIWNDCKLSWAPVEFDGIEFIRVPSNKIWRPDIVLYNNAV
GDFLVEDKTKALLKFDGTVTWVPPAIFKSSCPMDITYFPFDYQNCSMKFGSWTYDKAKID
LVLIGSKVNLKDFWESGEWEIIDAPGYKHDIKYNCCEEIYPDITYSFYIRRLPLFYTINL
IIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYL
LFTMIFVTLSIVITVFVLNVHYRTPMTHTMPGWVRSVFLRVLPRIMLMRRPIDQDGKALC
SDSGEDRGAGGGGGGGGGKGGKKRKNSLTQGGNCLEFGDNKLTEGGCGERGGKKCPCPCQ
HGKETPETTDPGKLSRQLSPQSINTVVAFSVLSPEIKQAIESVKYIAENMRSRNKAKEVE
DDWKYVAMVIDRIFLWVFVTVCILGTLGLFLQPVIGFLS
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagctgcgcgagggactttgctactcctcgtctttgtgttgataatgcaagac
tgcttctcctctaaaggggaggacaggttgttcaggaggctgttccggagttacaaccag
tttatcaggccggtggagaacgtctcagaccccgtcaccgtggagtttgaggtttccatg
tcacagctcgtaaaagtggatgaagtgaatcagatcatggagacaaatctgtggctgaga
cacatctggaacgactgcaaactgagctgggccccagtagagtttgatgggattgagttc
atcagagttccatccaacaagatctggagacctgacatagtgctttataacaatgctgtg
ggagacttcctggttgaagataagaccaaagctctgttgaagtttgacggtacagtcacc
tgggttccccccgccatctttaagtcctcctgccccatggacatcacctacttccccttc
gactaccagaactgctccatgaagtttggctcctggacctacgacaaggccaagatcgac
ctggtgctcattgggtcaaaggtcaacctcaaagacttctgggagagcggcgagtgggag
atcatcgatgctccgggctacaagcacgacatcaagtacaactgttgcgaggagatttac
ccagacatcacctactccttctacatcagacgcctgcctctcttctacaccatcaacctc
atcatcccctgtctcctcatctcttttttaacagtcctggtcttctacctgccctccgac
tgcggagagaaggtgaccctctgtatctctgtcctcctctccctcactgtgtttcttctg
gtgatcactgagaccatcccgtccacctccctggtcatccccctcatcggggagtacctc
ctcttcactatgatcttcgtcaccctctccatcgtcatcaccgtgttcgtcttgaacgtc
cactaccgtacaccaatgacccacaccatgccgggctgggtcaggtccgtcttcctcagg
gtgctaccaagaatcatgctgatgagacggcccatagaccaggacggcaaggccctctgt
tcagacagcggagaggatagaggagcaggaggtggaggaggaggaggaggagggaaagga
ggaaagaagagaaagaatagtctgacgcagggagggaactgcctggagttcggagacaac
aaactgactgagggaggatgtggagaaagagggggaaagaagtgcccttgcccctgccaa
catgggaaggagaccccagagacaacagatccggggaaactgagccgccagctgagtcct
cagagcatcaacacggtggtggccttctccgtcctgtccccggagattaaacaggccatc
gagagcgtcaagtacatcgccgagaacatgaggagccgcaacaaggccaaagaggtggag
gatgattggaagtacgttgccatggtgatagacagaatcttcctgtgggtgtttgtgacg
gtgtgcatcctcggaaccctcggcctcttcctgcagcctgtcattggcttcctgtcataa
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