Salvelinus fontinalis (brook trout): 129842341
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Entry
129842341 CDS
T11136
Name
(RefSeq) integrin alpha-10-like
KO
K06586
integrin alpha 10
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04510
Focal adhesion
sfon04512
ECM-receptor interaction
sfon04810
Regulation of actin cytoskeleton
sfon04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129842341
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129842341
09142 Cell motility
04820 Cytoskeleton in muscle cells
129842341
04810 Regulation of actin cytoskeleton
129842341
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfon04515
]
129842341
Cell adhesion molecules [BR:
sfon04515
]
Integrins
Integrin alpha subunits
129842341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_1
Integrin_A_Ig_2
Integrin_A_Ig_3
VWA_2
FG-GAP_3
FG-GAP_2
ITGAX-like_Ig_3
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
129842341
NCBI-ProteinID:
XP_055766836
LinkDB
All DBs
Position
Unknown
AA seq
1104 aa
AA seq
DB search
MELHKYLLLLKLIVLLKGLCECFNIDVKRPRIYTGPEEALFGFSVLQHDNAGDKSMLVGA
PWDGPSNTRRGDVYKCIVGEERSSNCTKTNLGESTLQNVSRNLKNSHLGMTLSPDSPDGF
LACAPLWSQECGTSVFSTGICASVSDDLEPRETIAPTAQRCATYMDIVIVLDGSNSIYPW
YEVQNFLSNILSKFHISPEQMQVGVLQYGEVAVHEWSLRDYQTTQEVVEAAKNISRQEGR
ETRTAYAIHMGCTEAFSPERGAREGATKVMIVVTDGESHDGEELPDALEECEKRNITRYA
IAVRTLGYNESSFKFEMSQIGFSTHVLDDGILFGMVGAYDWDGGVLKEGAEGRIMPTRRG
ISMTCYTVSSVIVGDWRRLYVAGAPRFKHKGKVILFELSNNGDVNIAQALNGEQIGSYYG
SEVCGLDVDQDGITDVLLVAAPMYLGPGNKEAGRVYIYSLSGEEVFVSNGTLKAEDRSQD
ARFGYALASAPDLNHDGYTDLLVGAPLEDGHNGAIYVYHGQGIHIIHNYKQRIAGSSLSP
SLQYFGRSVSARLDLDGDGLLDLAVGAQGSAVLLSSRIIVQINMSLSFQPHSINVIQKTC
QRGGRESACLNATACFLALSRSPGTHSNSFELSVVAMLDERKLTARALFDDSNQRQSQLG
VRVHTGQTVCHKLPFHVFDTADYIRPISFSLRFKINDTESGPVLDEGWPTTFKRSIAFFK
DCGEDDVCVTDLVLQAHMDISGTRLQPYVIRSPRRRLAVEVQLQNRLENAYNSSLSLHYS
RNLHFSSLSIREDTQLKIECTSLSSNSHSCNVSYPVFRSHSKVNFMLEFEFSCTSLLSKV
QMKLTVASDSVEREATLGDNSVQLQTVVQYEPDLFITSDSNLNRYEVHPTRTISEAIGPE
FYTHFRLQNLGCYSVSNLELRLSLPSVAAGDRVFMAVTEVFSYNVTGVNCSVDSDVSQLK
DRQRDVRPLHPEDMQQTDLLNCSRSWCVEVVCEVQQLHRGQTALIRVSRRVHDNFFRQAK
FKVVRIVSAYRLAAQESNLVTLGSGAIWRETVLEVLKGRAIPISLWILIGSIIGGLLLLA
LIIFAMWKLGFFTRKQIKDEELED
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcacaaatacctgctactcctcaagttaatagttctcctcaaagggttgtgt
gagtgtttcaacatcgatgttaagcggcctcgtatctacactggtccagaggaggccctg
tttggtttctctgtgctacagcatgacaatgcgggggacaaatcgatgctggttggtgct
ccttgggatggaccttccaataccaggagaggagacgtgtacaaatgcatcgtgggagag
gagaggagctccaactgcaccaaaaccaacctaggtgagagcacgttacagaatgtatct
agaaacctgaagaactctcatctaggaatgaccctcagtccagactcacctgatggattc
ctggcgtgtgcgcccctgtggtctcaggagtgtggtacgtcagtcttcagtacagggatc
tgtgcttctgtcagcgatgacctggaacctagagagaccatcgcccctacagcacagaga
tgtgcaacatacatggacatagtgatcgttctggatggctccaatagtatctatccctgg
tatgaagtccagaacttcctcagtaacatcctcagcaagttccatatcagcccagaacag
atgcaggtgggggttttgcagtacggtgaggttgcggtccatgagtggtcactgagagac
taccagacaacacaggaggtggttgaagcagctaagaacatcagccgacaggaggggcgg
gagacacgcacagcatacgccatccacatgggctgcacggaggcattcagccctgagcgg
ggggcgagggagggggccaccaaggtcatgatcgtggtgacggacggagagtcacatgat
ggggaggagctaccggacgctctggaggagtgtgagaagagaaacatcaccagatacgcc
atcgctgtgaggacgctggggtacaacgagagctccttcaagtttgagatgtcccagatc
ggcttctccacacacgttctcgatgatggcatcctgtttgggatggtgggggcgtatgac
tgggacggaggggtgctgaaggagggagctgagggccgcatcatgcccaccaggagaggc
atcagtatgacctgctacacagtgtcgtcagtgatagtgggagactggaggaggctgtat
gtggctggagctcccaggttcaaacacaaaggaaaggtcattctgtttgaactgagcaac
aatggagatgtcaacattgcacaggccctcaatggagaacagattgggtcgtactatggc
agtgaggtgtgtgggttggacgtggaccaggatggcattactgatgttctgctggtggca
gcacccatgtacctgggccctggcaacaaggaggcaggcagagtctacatctactccctc
agtggggaggaggtgtttgtgtctaacggtactctgaaggcagaggataggtcccaggat
gctaggtttggctacgccctggcctccgccccagacctcaaccatgacgggtacactgac
ctgctggtgggggcacccctagaggacggacacaatggggccatatacgtctaccacggc
cagggcatacacatcatccacaattacaaacagcgtatcgcagggtcgtccctgtccccc
tctctgcagtactttgggcgcagtgtgagtgccagattggacctggatggagatggtctg
ttagacctggctgtgggggcccagggcagtgctgtactactcagttctcgtattatagtc
cagatcaacatgagtctgtccttccagccccactccatcaacgtcatccagaagacgtgt
cagagaggagggagggagtctgcctgtctcaacgctacagcctgcttcctggctctgtcc
cgctcccctggaactcacagcaacagctttgagctgtcggtggtggccatgttggatgag
agaaagttgacagcgagggcgttgtttgacgacagcaaccagagacagtcacagctgggg
gtcagagttcacacaggacagaccgtctgccacaaactgcccttccatgtgtttgacaca
gctgactacatccgtccaatcagcttctccctgcgctttaagatcaacgacacagagagc
ggcccagtgctggacgaaggctggcccaccaccttcaagagatcgattgcgttcttcaaa
gactgtggtgaggatgatgtgtgtgtcactgatctggtgctgcaggctcatatggacatc
tctgggacaagactgcagccctatgtgatccgtagccctcgcagacgtctggctgtagaa
gtccagctgcagaacagactggagaacgcctacaacagcagcctatcgctgcactactca
cgcaacctccacttctctagtctcagtatacgggaggatacccagttgaaaattgagtgt
acatctctcagttccaacagtcattcctgtaatgtcagctatcctgtgttccgctcccac
tccaaggtgaacttcatgttagagtttgagttcagctgtacgtctctgctcagtaaagtc
cagatgaaactcacagttgccagtgacagtgtggagagagaggctacgttgggagacaac
agtgttcagctccagactgtggttcagtacgaacctgacctcttcatcaccagtgactcc
aatctgaaccgatatgaggtccacccaaccagaaccatatcagaggcaataggaccagag
ttctacacacacttcaggctgcagaacctgggctgttacagtgtgagtaacctggagttg
aggctgagcctgccctctgtagcagctggagacagagtcttcatggctgttactgaggtc
ttctcttacaacgtgacaggggtgaactgcagtgtagacagtgacgtgtcccagctgaag
gacagacagagagatgtacgaccactacatcctgaagacatgcaacagactgacctactg
aactgcagcaggtcgtggtgtgtggaggtggtgtgtgaggtacagcagctgcatcgagga
cagaccgctctcatacgagtcagccgcagggtccacgacaactttttcagacaggctaag
tttaaggtggtgaggatagtgagtgcctatcgtctggctgctcaggaatctaacctggtc
actctggggagtggcgccatctggagggagacggtgttggaggtactaaaggggcgggcc
atccccatttctctctggattctgataggtagcatcattggagggcttctgctattggcc
ctcatcatcttcgcaatgtggaagctggggtttttcactcgtaaacagataaaggacgag
gaactcgaggactga
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