Salvelinus fontinalis (brook trout): 129842423
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Entry
129842423 CDS
T11136
Symbol
zc3h13
Name
(RefSeq) zinc finger CCCH domain-containing protein 13 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129842423 (zc3h13)
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
129842423 (zc3h13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
129842423
NCBI-ProteinID:
XP_055766951
LinkDB
All DBs
Position
Unknown
AA seq
2196 aa
AA seq
DB search
MSKIRRRVTVENSKTISDSSSSQTTTTPSRRPSVFERLGPSTGSNAVEVCTSTPASNPLT
DTTHACPEKTNCRNWLKTGNCSYGNTCRYTHGTQPRGKGFSGSFSRSAERPTGDLRERMK
NKRQDVESDATKREPEEPTSPTARQRDSSRGRHREKEDIKITKERTPASEEETTEWEANR
EDSDNGDYDYELSLEMKRQKIQRELMKLEQENMEKREEIVIKKEEPTTKTRTTIISKTSP
ERSSSKGSPSSRKSSGSPKHTKGPKASGSRKKEKKTSVSSSASATARSSKGGHGKKKGPR
TPSPPPPVLPLGNPVVAAGGKKHKGKHKNKEKCEEKPPKEGKERGRDAEKHKEKKEKRRD
RSDSSHKAKRSVMSEERSGSVSSPSRDRVVSPSARKNKSTSPKVASQKTLAPASPPHRSP
PPRHKRTPTPPRHHSPSSHSGSSAQRHSPSPRRRRSASPAYNREPPAASSPPGQRCSSRS
PAPFRGTSSPQRRTSPGERNRSRGRERGRSERGRSPPAQEHRHERRDESRGKPEKDGSRD
DRDYDVAETSSSRDAAREDRETKEGRERRGDGRSDRRGDSTSTSRDPTRDRDRDTKDSTR
EPRTTETTSTRSGRDPLEYRERDREREREREKEKERERERGEREKTDRKEEAVPEEGRGY
GRGHGREEGGRTEGRGETRTESRAERPGRGRGREADASDKGSSGSTRNARSSQLESGGHD
GWESRSGGGFREKSAERSTDRGAERGGGAERGGGAERGGGAERGGVDRGGAERDRYDGDR
RGGEQATGRDSSYDRRGGHTDRGDRRENRERDQRASSPGRHPARGEEPDREETRGRDERR
GEEKGGDRREDRAREREREREREREKEREREKEKEREAERERVREREREREREREKEKER
EKEKEREKEREREREREEREREREERDRERKEREREREREREREREQRERERQREWEERE
KGRDERRERTRDEPRDDRSVRDSHEDRKTSRKRHRVETTPSPTRPSPKRVRDATPGDGEE
YNSPEEKSERLIGGGQPKVRPTSGPGPITILPVTVPVCPPPPVIDSVEKHRLLSQVVLPP
QDPLLRSPPSTSVVEDTKPSRWKDEERRGGGDKREGRSRRNEEADARGDRGGAGRGGERR
GEHPSDSSTPVSASGSDSRRGKERDGREPTPPPPPVALVTEDRDAPVPSGHEEGKKKTKS
QKKGLKKGRKEEGVAGGVSGAPERFTNPEPPSSMALSDGPPPPLLSPRKAPKKKALDKKR
KRSRGAESDASEEEPGSSHLPPGKRNKRGPRTPPPAPKEALLSQRAMPHSVAEPLPQPVK
MDTNFSDWSDEDVLERGGGSVAVKAPPTVPTERTPTEALPRRGGPRGGKERERMERPVPL
PIAPLLSQDPPMLLQTLPPQPLMSQPLLRKPPPEQKRSSSMGSNQSRASSRRLRSPSNES
AHREDPQQGQGPGRPRRGHQLQGGNSRDRERERERDRERERERGERERGPVVTEPPVVRG
EERKSRIDQLRRGDPSRSTSSDRQDSRSHSSRRSSPESERQVQSRAGSYDGRERERERER
EREQFERERERKDLRQQQGPLGPLPPLQQQGQQRDWEPEGPREWGGRGREPLLMRGGNRE
QMRERDLRDMRGERERLLPEGLLQQHERERERERGGNRGVGRGGDHGNDRERERMLLMDL
PPHGDPKNRMDMRGDRPDMRGDRPDLRGDMRGDRPDMRGDIRGDMRGDMRPDIRGDIRGD
MRPDMRGDIRGDMRGDMRGDIRGDMRPDMRGDMRPDIRGDIRGDMRPDMRGDIRGDMRPD
MRGDMRPDMRGDMRPDMRGDIRGDMRSDMRGDIRGDMRPDIRGDIRGDMRPDIRGDIRGD
MRPDIRGDIRGDMRPDIRGDIRGDMRGGPDIRPDIRPDHMRPDIRGPDRAEFSLLLPHEA
LGHGGTDQDKPGNSHHPVGGEIQEAEKQDSVDDEDDAKADDAVSVVSGGEEYEPISDDEL
DEILADSAQKREDGQEEEKTPGPLDVIDVDWSSLMPKQKQEPRAAGAALLRFTPGAVLLR
AGVSKRLAGPELLERVREVCKKELDDPKDADKLFEHDLGALNKAALNRKVERAGLLRNLG
PCCKALCARRDMAIRRQLLKNEKGLTKQMYPSVPVVDSELFQLSMRLFKKTVAAARSNQP
PLGPPAGPEKADKGLVPAASPVAKPGTPQPPEMCVS
NT seq
6591 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagataaggcggagggtaacagtggagaattctaaaaccatatctgacagcagc
agtagccagaccaccaccaccccgtctcgccggcccagcgtgtttgaaagacttggcccc
agcactggtagtaatgctgtcgaggtgtgtacctctacacctgcatctaacccactgaca
gatacaacacatgcatgtccagagaagactaattgtagaaattggttgaagactgggaat
tgcagttacggcaatacttgtcgctacacacatggaactcagccacgaggcaaaggattt
agtggatcttttagcaggtcagcggagagaccaactggcgatctgcgagagaggatgaag
aataagaggcaggatgttgaatcagatgctacaaagagagagccagaggagcctacgtcc
cccacagccagacagcgagactcgtcccgaggccgccacagggagaaggaagatataaaa
atcactaaagagagaacccctgccagcgaagaagagaccaccgagtgggaagccaaccgc
gaagactcggataacggcgactacgactacgagttatccctagagatgaagagacagaag
atccagcgggagctcatgaagttggagcaggagaatatggagaaaagagaggagattgtt
atcaagaaagaggagccaaccaccaaaacgaggaccactatcatatccaagacatccccg
gagcgttccagctctaaaggttccccttcctccaggaagtccagtggatctcccaaacac
accaaaggacctaaagcttctggttccaggaagaaggagaagaagacctctgtgtcgtcc
tctgcgtccgccacggccagatcttccaaggggggccacgggaagaagaaaggtccccgc
acccccagcccccctcctccggtgcttccgctggggaaccctgtcgtggcagccgggggg
aagaaacacaaggggaagcacaagaacaaggagaagtgtgaggagaagccgcccaaggag
ggaaaggagagagggagagacgcggagaaacacaaggagaagaaggagaaacgcagagac
cggtcagacagctcccacaaggccaagcggtcagtgatgtcggaggaacgttccggcagc
gtgtcctctccttccagagaccgagtggtgtccccgtcagccaggaagaacaagtccacc
tccccaaaagtagcctcccagaagacccttgcgcctgcctccccacctcacaggtctccc
cctccccgccacaagcgcaccccaaccccgccccgccaccactccccgtcctcccactct
ggctcctcagcccagagacactctccttccccccgccgacgccgctcggcatcccccgcc
tacaaccgcgagcccccagccgcctcctcacctcctggccagaggtgttcctcccgcagc
cctgcgcccttccgaggcacctcctctcctcagaggaggactagccccggagaacgaaac
cgctctcgggggcgtgagagaggacgcagcgagagggggaggagcccacctgcccaggag
caccgacacgagcgtcgagacgagagccgcgggaagccagagaaagacggtagccgtgac
gaccgggactacgatgtggcagagacgagctcttctcgtgatgccgcccgtgaggaccgg
gagacaaaagaggggcgagagcgccggggtgacgggcgcagcgaccgacgaggagactcc
accagtacctccagggaccccaccagggatagagaccgggacaccaaggactcgacccgg
gaacccagaaccacagagaccacgtcaacacgctccggacgagaccctctggagtacagg
gaacgggaccgagaacgggagagggagcgagaaaaggagaaagagagggagcgggagaga
ggagagagggagaagacggacaggaaggaggaggctgtcccggaggaggggaggggctat
gggaggggccacgggcgagaggaaggagggaggactgaagggaggggggagacgaggaca
gagagtagagctgagagacctggcaggggtaggggccgcgaggctgacgcatcagacaaa
ggttcctcaggctccacccggaatgcccgaagctcccagcttgagagtggtggtcatgat
ggttgggagtcacgtagcggcggaggcttccgtgagaagagtgcggagaggagcaccgac
cgtggggcggagagaggaggaggcgcagagagaggaggaggcgctgaaagaggaggaggc
gccgaaagaggaggtgtcgacagaggaggagcggagcgtgaccgttatgacggagacagg
agaggaggggagcaggcgactgggagagactcatcctacgaccgtagaggtggtcacacc
gaccgtggtgaccgcagagagaacagggagagagaccaaagagcgtcctctcctggtcgg
cacccagccagaggagaagagccagacagggaggagaccagaggaagggatgaacgcaga
ggagaggaaaaaggaggggacaggcgagaggacagggcccgagaaagggagcgagagagg
gaacgggaaagagagaaggagagagaaagagagaaggagaaggagagggaggcagagcgg
gagagggtccgggagagggagcgagaacgggagcgagagagggaaaaggaaaaggagagg
gaaaaggagaaagagagggaaaaggagcgagagagggaacgggagagggaagagagggag
cgggagagggaggagcgagatagggagaggaaggagagagagcgggagagggaacgagag
cgggagagggagcgagagcaaagagagagggagaggcagcgggaatgggaggagcgtgag
aaaggaagggatgagcgacgggaacggactagggatgaaccaagggacgaccgctctgtc
cgagactcgcatgaagaccgcaagaccagccggaagaggcacagggtagagaccacaccc
agcccgactcgcccctctcccaagcgagtaagggacgccaccccaggagacggcgaggaa
tacaacagccctgaggagaaaagtgagcgtttgattggtggaggccagcccaaggtccgc
cccacctctggccctggcccaatcaccatcctccccgtcacagtaccagtgtgtcctcct
cctccagtcattgacagtgttgagaaacaccggctgttgagtcaggtggtactcccgccc
caggaccccctcctgcgttccccccccagcacctctgtagtggaggacaccaagcccagc
cgctggaaagacgaggagcgccgtggaggcggggacaagagggaggggaggagccgccgg
aacgaggaggctgacgcccgcggagacagaggaggagcaggcagaggaggggagagacgg
ggggagcacccctcagatagcagtacccctgtctcggcctccggctcggactctaggaga
ggtaaagagagggacggtcgggagcccacccctcccccgccgcccgtggccctggtcacc
gaggacagagatgctccagtcccgtcaggtcatgaggagggcaagaagaagactaagtcc
cagaagaaaggcctgaagaaggggaggaaggaggagggcgtggcaggaggtgtttcagga
gctccagagaggttcaccaacccagagcccccctcctccatggccctctcggacggcccc
ccgccccctctcctctccccccgcaaggcgcctaagaagaaggctctggacaagaagagg
aaacgatcccgtggcgccgagtcggacgcgtctgaggaggaaccaggctcctcccatctt
cccccgggcaagaggaacaagaggggtccccggacgcccccgcccgcgccaaaggaggct
ctgctatcccagagggccatgccacattctgttgcagagcccttgccacagcccgtcaaa
atggacaccaacttcagcgactggtctgacgaggatgtgctggagcgcggtggtggatcg
gtggccgttaaggcaccccccacagtccccactgagaggactccgaccgaagctcttccc
aggagaggaggtccgagggggggcaaggagagggagaggatggagaggcctgttcccctg
cccatcgcccctctgctgtcccaggaccctcctatgttactccagaccctgcccccccag
cccctcatgtcccagcccctgctgaggaagcctcctccggagcagaagaggagcagcagt
atgggaagcaaccaaagcagggcctcatccagacgtctccgctctccctccaacgagtca
gcccacagagaggaccctcagcagggccaaggaccaggccgacccaggagaggacaccag
ctccaggggggcaactcccgagaccgggaacgagaaagggagcgagacagggaaagagag
agggagcgtggtgagagagagaggggaccagtggtcacagagcctccggtggtgagggga
gaggagcggaagtcacgcatcgaccagctgaggagaggagatcccagtcgcagcacctcc
tcagaccggcaggactctcgcagccacagctccaggcgtagctcccctgagtcagagcgt
caggtgcagtcgcgggccgggtcctacgacggccgagagcgtgagagggagagagagagg
gagcgggaacagtttgagagggagcgtgagcgcaaggacctccgacagcaacaggggcct
ctggggccactacctcctctccagcagcaggggcagcagagagactgggagcccgagggg
ccacgggagtggggtgggaggggccgtgaacccctcctcatgcgtggaggcaacagagag
caaatgagagagcgtgatctccgtgacatgcggggtgagagagagcggcttctgcccgag
ggtctcctgcagcagcacgaacgagagcgggaaagggagcgcggcggcaacaggggcgtt
ggccgtggtggcgaccatggcaacgaccgggagcgggagaggatgctactgatggacctg
ccgccacatggggaccccaagaacaggatggacatgaggggagacagaccagatatgagg
ggagacagaccagatttaagaggggacatgcgaggagatagacctgatatgaggggagac
attcgaggggatatgagaggagacatgagacctgatattaggggagacattcgaggggat
atgagacccgatatgaggggagacattcgaggggatatgagaggagatatgagaggagac
attcgaggagatatgagacctgatatgaggggagacatgagacctgatattaggggagat
attcgaggggatatgagacccgatatgaggggagacattcgaggggacatgagacctgat
atgcggggagacatgagacctgatatgaggggagacatgagacctgatatgaggggagac
attcgaggggacatgagatctgatatgaggggagacattcgaggggacatgagacctgat
attaggggagacattcgaggggacatgagacctgatattaggggagacattcgaggggac
atgagacctgatattaggggagacattcgaggggacatgagacctgatattaggggagac
attcgaggggatatgagaggtgggccagatataagaccggacataaggccagatcacatg
agaccagatatcagggggccggacagggctgagttctctctcctgctcccccacgaagcc
ttgggacacggcggcacggaccaggacaaaccaggcaacagccatcaccctgtgggagga
gagatacaggaagcagagaaacaggacagcgttgacgacgaagatgacgcgaaggcggat
gacgctgtgtcggtggtgtctggcggggaggagtacgagccaatcagtgatgacgagttg
gatgagatcttggcggacagcgcccagaagagagaggatgggcaggaagaagagaagacg
ccaggtcccctggatgtgattgatgtggactggtccagtctgatgcccaagcaaaagcag
gagccccgggcggcaggggcagctctgctccggttcaccccaggggcagtgctcctcagg
gcgggcgtctccaagcggctggctgggcccgagctcctggagagagtcagggaggtctgc
aagaaggagctggacgaccctaaagatgctgacaagctgtttgagcacgacctgggtgct
ctgaacaaggcagctctgaacaggaaggtagagagggcaggtctgctgaggaacctgggc
ccctgctgtaaggccctctgtgcccgtagggacatggccatcagacggcagctcctcaag
aacgaaaagggcctgaccaagcagatgtaccccagtgttcctgtggtggacagtgagctc
ttccaacttagcatgcgtctcttcaagaagactgtagccgccgccagaagcaaccagccc
ccgttggggcccccagcaggcccagagaaggccgacaaggggctggtaccggcagcttca
ccggtagccaagcccggtacaccacagccccccgagatgtgtgtctcctga
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integrated database retrieval system
