Salvelinus fontinalis (brook trout): 129843012
Help
Entry
129843012 CDS
T11136
Name
(RefSeq) general transcription factor IIF subunit 1-like isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129843012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfon03021
]
129843012
Transcription machinery [BR:
sfon03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
129843012
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
129843012
NCBI-ProteinID:
XP_055767708
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
MASLGGSSSSSTEYIVRVPKNTSKKYSIMAFNSGDKVNCSSWTQARMERDMSNRRMYGVE
ETEEGAAGSEFGKKQREEARRKKFGIVTREFKVEDQPWILKVNGKAGKRFKGTKKGGVTE
NASYYIFTQCPDGAFEAFPVNGWYNFVPQAKHRTLTAEEAEEEWGRRNKVVNHFSIMLQR
RLREQERGPDDDDEEGEKGGKKKKKKGGRGGDLRIHDLEDDLELSSDESDSSGREDGDSK
PKKKEGDVKGKGKKKKKKRGSDSEANEDSDDGDFEGLEVDYMSDESSSEEEAGEEKAKSN
KEAVPKGIDEASESEEESEEEKQNEEEGKEEEEEEGKKTPVQTKKKRDSSGESDTSEDSD
IDGEAASALFMVKKRTPPKRGGGRGSGGSSRTGSRPGTPSIDSASTSNTLRAAASKLEQG
KRHVVGGSSESPAAKRLKMESSSTAVTTQSPAPSGKSTPQPPSGKSTPQPPSGKSTPSSS
DVQLTEEAVRRYLIRKPMTTKDLLKKFQTKRTGLSSEQTVNVLAQILKRLNPERKNVNDK
MHFYLTE
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcactgggtggcagcagttcctcttctacagagtacatagtccgggtccccaag
aacaccagtaagaagtacagcatcatggcctttaactctggggacaaagtcaactgctcc
tcctggacccaggctcgtatggagcgggacatgagtaacaggaggatgtatggtgtggag
gagactgaggagggggcggcaggcagtgagtttgggaagaagcagagggaggaggcacgc
aggaagaagtttggaatcgtcaccagggagttcaaggtggaggaccaaccctggatcctc
aaggtcaacggcaaggcagggaagaggttcaagggtacgaagaaagggggcgtaacggag
aatgcgtcctactacatctttacccagtgtcccgacggggcctttgaggccttccccgtc
aacggttggtacaacttcgtgccccaggccaaacaccgcacgctaaccgccgaggaggca
gaggaggagtggggcaggaggaacaaggtggtgaaccacttcagcatcatgctccagagg
cgcctgcgggagcaggagagagggccggacgatgacgacgaggagggcgagaaggggggg
aagaagaaaaagaagaaaggaggaagaggaggggacctgcgcatccatgacttggaggat
gacctggagctgagcagtgatgagagtgacagcagtggacgagaagatggagacagcaag
cccaagaagaaagagggggatgtgaaggggaaggggaagaagaaaaagaagaagaggggg
agtgacagcgaggctaatgaggacagtgacgatggagactttgagggcctggaggtggac
tacatgtcagatgagagcagttcagaggaagaggccggcgaagagaaggccaagtccaat
aaagaggccgttcccaaaggaatcgacgaggcatctgagagtgaggaagagagcgaggag
gagaaacagaacgaggaagaggggaaagaggaggaggaggaagaagggaagaagaccccg
gtccagacgaagaagaagagagacagcagcggtgagtcggacacttcggaggacagcgac
atcgatggagaggcagcctccgctctcttcatggtgaagaagcgtactcctcctaagcgc
ggtggtgggcgtggctctggaggcagctccaggactggcagtcgccctggaacaccgtcc
atagactccgcttccacctccaacacactccgagccgccgctagcaaactggagcaaggt
aagagacatgtggtgggtggtagctctgagtctccagctgccaagaggctgaagatggag
tccagcagtacggctgtcaccacccagagtcctgccccctcagggaagagcacgccacag
cccccctcagggaagagcacgccacagcccccctcaggcaaatcaacccccagttccagt
gacgttcagctgacggaggaggcggttcgccgctacctgatccggaagcccatgaccacc
aaggacttgctgaagaagttccagaccaagaggactggcctgagcagcgagcagacggtc
aacgtcctggcccagatcctcaaacgcctcaaccccgagaggaagaacgtcaacgacaag
atgcacttctacctcaccgagtaa
DBGET
integrated database retrieval system
