Salvelinus fontinalis (brook trout): 129843384
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Entry
129843384 CDS
T11136
Name
(RefSeq) LOW QUALITY PROTEIN: neurofascin-like
KO
K06757
neurofascin
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
129843384
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfon04515
]
129843384
Cell adhesion molecules [BR:
sfon04515
]
Immunoglobulin superfamily
L1 family
129843384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Ig_4
C2-set_2
Ig_6
Ig_VEGFR-1-like_5th
BiPBP_C
DUF3792
Motif
Other DBs
NCBI-GeneID:
129843384
NCBI-ProteinID:
XP_055768068
LinkDB
All DBs
Position
3:29450702..29596970
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AA seq
1443 aa
AA seq
DB search
MRDLYRITRKERARTHTLSYTAYATAELTHVAERRRRNSDISTVTAQVRDVSGIVTGEEK
QRREMLAQGGPWALSVISLVLLLWQEVSAIDVPLDSKIQQDLKQPPTIMKQSLKDYIVDP
RDNIIIECEAKGNPVPTFSWRRNGKFFNVGKDPRVTMRKRSGTLEISFRSGGRPEDYEGE
YQCFASNDFGMALTNKILLRVSKSPLWPKEVLEPVVVGEGSPLVLACNPPPGLPPPLTFW
MDSAMMPITQDKRVSMGLNGDLYFSNVLAKDSHTDYSCNARFLFTHTIQQKNPFTLKVQT
KEPYNDTSSVNSTDPYGGRKVAETTPNFLSPTGTDSSRMVMRGEKLKLECIASGVPTPSI
KWFKKGGDLNQKVKLDNFNKTLRIDSVSEEDAGEYMCMANNQIGSIRHSIYVQVKAAPYW
LDQPSNLVLAPDENGRLVCRANGNPKPHIQWLVNGEPIESDSSLPNPSRSVVGDTIMFRS
VQIGSSAVYQCNASNDHGYLLANAFVSILDMAPRMLGPKNQLIKVIENNRTFLDCPYFGS
PLPELRWFKNGQGSGLDGGHYRVYINGTLEIKRARAEDQGTYTCVASNILGKEENQVLLE
VKEPTRIVRAPEHQSAIRGTMARFDCRVKSDLTLPITVTWLKDDKPLSPGSRFKKDEDSL
SIPNVHEGDEGTYTCTVKTEIDQDTASARLTVLEDASLSPSQSSVLPTDRPDSPMDLELS
DPEARNVRLTWIPGDDHNSPVTLFVVQFEEDRWETGKWQNHSSYPGNFNSVILELSPFVN
YQFRVIAVNSVGQSRPSLPSQRYQTSGAPPDAIPSGLKGWGTKKNNMEISWEPLLDTERN
GPNLRYSVWWRRKDTGEEWSNVTTVGAKHIVYDTETYVPYEIKLQAVNDFGLGRESNIII
GYSGEDKPTASPADLRVSKIDSTKVNVHWTPVDPSTVLGEFKEYRVYYWRESSMVKGLRV
NKEKRTKGFYSTVAQPTGILTDLQPYSTYRIYMVVANNRYEGPPCKHVEFSTKEGVPETP
KFFKIIQRSTDVINLEWDKPLEPNGILIGYKLNYQTVNGSRVGLMQMKSFLPNVTAYTLR
LPERAVRYKFYLAALTQVGAGEVYAEESPHFTNEEDFFSSVEPTEVSVSTTFPPPPPTTT
AATTTIITSTTTPPTTTTTTTTTTTTSTTTTAATTATTPVLVTSTKQARTNVLVGMAPGR
VIWNLTVEPNSNYANVSWNHNFPAGSSEFQLEFTLDSNGSMSSVPVNQPPIKLAGLIEGA
KYHLRVYSNEYHSISSNVVTFETSAAYSKDQVDIATQGWFIGLMCAIALIILILLIVCFI
KRSRGGKYPVREKKDLPLDAVDQKGEDGSFDYQNENENEKENSCSLKSSDEDNKPLQGSQ
NSLNGGVKESDDSLVDYGEGGDGQFNEDGSFIGQYTVKKDKDETEGNESSEATSPVNAIY
SLA
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atgagagacctgtaccgcattacacgaaaggagagagcccggacacacactctctcatac
acggcgtacgctactgcagagctgacacacgtcgcggagagaaggagaagaaacagcgat
atctctactgtcacggcacaggtcagagacgtatcaggaattgtgacgggagaggagaaa
cagaggagagagatgttggcgcagggcgggccttgggccctgtctgtcatatcactggtc
ctgctgctgtggcaagaagtgtctgctatcgatgttcctctcgattcaaagatccagcag
gacctgaagcagcctcccaccattatgaaacagtcgttgaaggactacattgttgatccc
agagataacatcatcattgagtgtgaggccaaggggaaccccgtgccaacgttctcatgg
cgacggaacgggaagttcttcaacgtggggaaggatccgcgggtgacgatgcggaagcgc
tcgggaacgctggagattagcttccggagcggagggaggccagaggactacgagggagaa
taccagtgttttgcctccaacgactttggaatggcactgaccaacaagatcctactacga
gtgtccaagtctcctctgtggcctaaggaggtgttggagccagtggtagtgggtgaggga
tctcccctggtcctggcctgtaaccctcctcctggcctgccccctccgctcaccttctgg
atggacagtgccatgatgcctataacccaggacaagcgtgtgtccatgggcctgaatgga
gacctgtatttctctaatgtgctggctaaagactcccacacagactacagctgcaacgcc
cgattcctcttcacacacactatccagcagaagaaccccttcacactcaaagtgcagacc
aaggagccgtataatgacacttcctctgtcaactccactgacccgtacggtggtcgtaag
gtagcagagaccacccctaacttcctctcccccacggggactgacagctcgaggatggtg
atgagaggagaaaagctaaagctggagtgtatcgcttccggagttccaactcccagtata
aagtggtttaagaaggggggagacctgaaccagaaggtgaaactagacaacttcaataag
actctgcgtatcgacagtgtgtcagaggaggatgcaggggagtacatgtgtatggccaac
aatcagataggaagcatccgacactccatctacgtccaggttaaagcggctccctattgg
ctggaccagccgtccaatctggtgctagcgccggatgagaacggtcgtctggtgtgtcgg
gccaatggaaaccccaaacctcacatccagtggctggtcaacggagagcctatcgagagc
gatagctccttgcccaaccctagcagatcggtggtaggtgacaccatcatgttccgctcc
gttcagatcggcagcagcgctgtgtaccagtgtaacgcctccaatgaccatggttacttg
ctggccaacgcattcgttagcatactggacatggcccccagaatgctgggtcctaagaac
cagctgataaaggtgatagagaacaacagaaccttcctggactgtccctattttggctcg
ccacttcctgagctacgctggtttaagaatggtcaaggaagtggtctggacggtggtcac
tatcgggtctacatcaacgggaccctagagatcaagcgtgcacgggctgaggaccagggg
acctacacctgcgtggccagcaacatcctgggcaaggaggagaaccaggttctcctggag
gtcaaagagccgacacgtattgtcagggctccagagcaccagtcagccatcaggggcacc
atggctcgtttcgactgccgggtcaaatcagacctcaccctgcccatcactgttacctgg
ctgaaggatgacaagcccctctccccgggatcgaggtttaagaaggatgaggattctctg
tccatccccaatgtccatgagggagatgagggaacatacacctgcactgttaaaacagag
attgaccaagacactgcctcagcacgccttactgtgttagaggacgcctccctgtctccc
tcacagtctagtgtcttgcctacagaccgtcctgactctcccatggacttggagctgtct
gaccctgaagcacgcaacgtacgactcacctggatacctggagatgatcacaacagcccc
gtcacactgttcgtggttcagtttgaggaggaccgttgggagacgggcaagtggcagaac
cactctagttatcccggaaacttcaactctgtcatcctggagctctctccttttgtcaac
taccagttcagagtcatcgctgtcaattctgtgggccagagccgccccagcctcccctcg
caacgataccagaccagcggagcccctcctgatgctatccctagtggcctgaaaggctgg
ggcaccaagaagaacaacatggagatcagctgggagcccttgttggacacagagcgaaac
ggccctaacctgcgctactcagtgtggtggcgacggaaggatacgggggaggaatggagt
aatgtgactacagtgggggcgaagcacattgtctacgacacagagacctatgtaccctat
gagatcaaactgcaggctgtgaatgactttggactgggacgcgagtccaacatcatcata
ggatactctggagaggacaagccaacagcctctcctgctgacctgcgagtgtctaagatt
gacagcaccaaggtcaatgtccactggaccccggtagatcccagcactgtattgggagaa
ttcaaggagtacagggtgtactactggcgtgagagcagcatggtgaagggtctgcgtgtg
aataaagagaagaggactaaagggttctacagtaccgtggcccagcctactggcatactg
acagacctacagccatacagcacctaccgcatatacatggtggtcgccaacaatcgctac
gagggaccgccttgcaaacatgtggagttcagtaccaaggaaggagtgccagaaactcct
aagttctttaagatcatccagaggagtacagatgttatcaacctggagtgggacaaaccc
ctggagcctaacggcattctgattggatacaaactcaactaccagacagtgaacgggtcg
cgtgtcggccttatgcagatgaagagtttcctacctaacgtgacagcgtacacgctccgc
ctacccgaacgagccgtccgctataagttctacctggcggccctcacacaggtgggagca
ggggaggtctacgctgaggagtctccacacttcaccaatgaggaagactttttcagctca
gtcgagcctacagaagtgtccgtgtctacaactttccctccacctcctcccactactacc
gctgctactacaaccattattacctcaactactactccccctaccactactactactact
actactactactactacttctactaccactactgctgcgactactgctactactcctgtg
ctggttaccagcaccaagcaagcacgtacgaatgtgttggtaggcatggctcctgggagg
gtgatctggaacctgacggtggagcctaacagtaactacgctaacgtcagctggaaccac
aacttcccggccggcagcagcgagttccagctagagttcacactggacagcaacggcagt
atgtcaagcgtaccggtgaaccagccgcccattaagctggcgggactgatcgaaggggcc
aagtaccacctgagggtgtactccaacgaataccacagcatctccagcaatgttgtcacc
tttgagaccagcgcagcctacagtaaagatcaggtggacattgctacccagggctggttt
atcgggctgatgtgtgcaattgctctcatcatcctcatcctcctcatcgtctgcttcatc
aagaggagtcgcggaggcaaatacccagtgcgagaaaaaaaagatctccctctggacgcg
gtggatcagaaaggggaggacggatcatttgactaccagaacgagaatgagaacgaaaag
gagaacagttgttccttgaaaagcagcgacgaggacaacaagcctctgcagggcagccag
aactctctgaacggcggggtgaaggagagtgacgacagcctggtagactacggcgaggga
ggggacggccagttcaacgaagacggctccttcattggccagtacacagtcaagaaggac
aaggacgaaacagagggcaacgaaagctccgaggccacctcacccgttaacgccatctac
tcgctggcgtaa
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