KEGG   Salvelinus fontinalis (brook trout): 129843499
Entry
129843499         CDS       T11136                                 
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2-like isoform X1
  KO
K14793  ribosomal RNA-processing protein 9
Organism
sfon  Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:sfon00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sfon03009]
    129843499
Ribosome biogenesis [BR:sfon03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    129843499
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_TEP1_2nd WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 EIF3I Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_IP5PC_F Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_IFT140_1st PEP5_VPS11_N Beta-prop_DCAF12 WD_LRWD1 Beta-prop_WDR75_2nd Beta-prop_WDR19_1st Beta-prop_NWD2_C WDR54 WD40_like Beta-prop_BBS7 LAIKA
Other DBs
NCBI-GeneID: 129843499
NCBI-ProteinID: XP_055768230
LinkDB
Position
3:complement(30577603..30583282)
AA seq 481 aa
MSSFFIKKKGPPKVFKKNENSAGSKRKNDTDTGNKLKKKLISKHNEEISSDSETEGFSLH
RKRRANVEEEFDETPQEKKLRLAKLYLDQLRDEEEKKAEEESFEMDLIAGRLQEEVLEQK
GQLQRMVAKDLLPPDVSEICLFRGHKLPVTCLVISPDDQHIFSASKDCSIIKWDVESGKI
LHTIAGGRKGTEDRHVGHTSHVLCMSISSDGKYLATGDMNKLIMIWEAATCKHLYKFTGH
RGPVSGLSFRRGTHDLYSASHDRSIKVWNVDENAYVETLFGHQDVITGLDSGSRERCVTA
GGRDRTVRVWKIAEESQLVFHGHEGSIDCIQLINEEHMITGADDGSVSLWSVNKKKPLSM
VKAAHGRHSDSGLEQPYWVAAVAALQNSDTVASGSHNSKVQLWKCGQGFRHLEPLFSIPV
NGFVNSLKFSSSGKFLVAGVGQEHRLGRWWRLKDAKNGLYIIPLKRQQPEQEEVNGEKNG
D
NT seq 1446 nt   +upstreamnt  +downstreamnt
atgtcgtctttctttataaagaaaaaaggacccccaaaggttttcaaaaagaacgagaat
tcagcaggttcaaaacgaaagaatgatacagacacaggaaacaaactcaagaaaaaacta
atttcaaagcacaatgaagaaatctccagcgactctgaaacagaaggtttttcactgcac
agaaaacggagggccaatgtcgaagaagagtttgatgagaccccacaagagaaaaaacta
cgattagctaaactttacctcgaccaattgagggatgaggaagaaaagaaggcagaggag
gagtcctttgagatggacctgattgctggaagacttcaagaagaagtgcttgagcaaaaa
ggacagctccaacggatggttgcaaaagatctcctgccaccagatgtgtcagagatttgt
ctgtttaggggccacaagctgccagtcacctgtctggtcatctctcctgatgaccaacac
atattttctgcttccaaagactgctccatcatcaaatgggatgttgagagtggtaagata
cttcatacgatagctggtgggaggaaaggaacagaggatcgccatgtgggacatacgtcc
catgtcctatgtatgtctatatcatcggatggcaaatacctggctactggagacatgaat
aagttgatcatgatctgggaggcagcaacatgtaaacacctatacaagttcacaggacat
agaggcccagtatcgggcctatccttcaggaggggcacccatgacttgtacagtgcctct
catgaccgctccatcaaggtgtggaacgtggacgaaaatgcctatgtggaaacactgttt
ggtcaccaggatgtgatcacagggctggacagtgggagtcgggagcgctgtgtgactgca
ggggggagggaccgcactgtgagggtgtggaagatcgctgaggagtcccagctagtgttc
catggccatgagggctccatcgactgtatccagctcattaacgaggaacacatgataaca
ggcgctgacgatggctctgtctccctgtggagtgtgaacaaaaagaagccccttagcatg
gtgaaggcagcccacggtcggcatagcgactcgggactggagcagccctactgggtagcg
gccgtggcagctctgcagaactctgacaccgtagcctcaggttcccacaactctaaagtg
cagctgtggaaatgtggtcaggggttccgtcatctggagcctctcttcagcatccctgtg
aatggttttgtcaacagtctaaagttctccagttctgggaagttcctggtggcaggagta
ggacaggagcacaggcttggtcgatggtggagactgaaagacgcgaagaacggactctac
attattcctctgaaacgacaacagccagagcaggaagaggtgaatggagaaaagaatggg
gactag

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