Salvelinus fontinalis (brook trout): 129844083
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Entry
129844083 CDS
T11136
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129844083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129844083
03012 Translation factors [BR:
sfon03012
]
129844083
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
129844083
Translation factors [BR:
sfon03012
]
Eukaryotic type
Release factors
129844083
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
LPD34
Motif
Other DBs
NCBI-GeneID:
129844083
NCBI-ProteinID:
XP_055768427
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MDPRDAAPDSWEQEDDVEAPVDGKLDSEFAALNVNAKPFVPNINAVEFVPSFFQKGPSED
PDSGADVEPVVATMEVAETAAPVENGDSEMTTEETWDLKGVEPNEEEPGGGPGGDGGPIV
VEEILEEEVLEEEEDLPIMPKVVALPPDAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGM
VEKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAP
GHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIILVN
KMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEPVESCTWYT
GLPFIPHLDSLPNLNRVSDGPVRLPIVDKYKDMGTVILGKLESGSISKAQQLVMMPNRHT
VEVLSLLSDDVETDDASPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTFDAQIVII
EHKSIICPGYNAVLHIHTCIEEVQITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTA
GTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVAERD
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagagacgctgcccctgattcctgggaacaagaggatgatgttgaggccccg
gttgacgggaaactcgattccgaattcgccgccctcaacgtgaatgccaaaccgtttgtc
cccaacataaatgccgtcgaatttgtcccgtccttctttcagaaaggcccctcggaagat
cctgattccggtgcggacgttgaaccagttgttgccaccatggaggtcgcagaaactgca
gccccggtggagaacggcgactctgaaatgaccacagaggagacatgggacctgaaaggg
gtggagcccaatgaggaagaaccaggaggagggcctggtggcgacgggggaccaatagtt
gttgaggagattctggaggaggaagtcctagaggaggaggaagacttgccaatcatgcct
aaagtggtcgccctcccaccagacgcgcccaagaaggaacatgtgaacgtggtgttcatc
ggtcatgttgatgctggcaagtctaccatcggaggtcaaatcatgtatttaacaggcatg
gtggagaagagaactctggagaagtacgaaagagaagccaaggagaagaacagggaaacc
tggtacctttcctgggctctggacactaaccaggaggagcgagacaaggggaagactgtg
gaggtgggcagagcgtactttgaaactgagaaaaagcactttaccatcctggatgcgcca
ggccacaaaagctttgtgcccaatatgatcggaggagcgtcgcaagctgacctggctgtg
ctggtgatctcagccaggaagggagagtttgagacgggctttgagaagggtggacagaca
cgggagcacgccatgttggccaaaacggcgggggtgaagcatctgatcatcctcgtcaac
aaaatggacgaccccacagtgaactggagcctagagaggtacgaagaatgcaaggaaaaa
ctagtgccatttttgaagaaggttggcttcaaccccaagaaagacattcacttcatgccc
tgctccggcctcacaggagccaacctcaaggagcctgttgagtcgtgcacttggtatacg
gggttaccattcattccacatctggacagtttgccaaacttaaacagagtgagcgacgga
ccagtcagattacccatcgtagacaaatacaaggacatgggtactgtcatcctggggaaa
ctggagtcagggtccatcagtaaagcacagcagcttgtcatgatgccaaacaggcacaca
gtggaggtgttgagcctgctgagtgatgatgtggagacagacgatgcttctcctggagag
aacctgaagctaagactgaagggcatcgaggaggaggagatcctgccaggcttcatcctc
tgtaacgctgagaacctctgccactctggacgcacctttgacgcccagattgtcatcatt
gaacacaagtccattatctgccctggttacaatgctgtcctccacatccacacctgcatc
gaagaagtgcaaattacggccttaatctgtctggtagacaagaagtcgggagagaaaagt
aagacgcgaccgcgctttgtgaaacaggaccaggtgtgcattgcccgtctgcgcaccgcc
ggaaccatctgccttgaaaccttcaaagacttcccccagatgggacggttcaccctacgg
gatgaaggtaagaccattgccattggtaaggtgctgaagctcgttgctgagagggactga
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