Salvelinus fontinalis (brook trout): 129844864
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Entry
129844864 CDS
T11136
Name
(RefSeq) dmX-like protein 2 isoform X1
KO
K24155
rabconnectin-3a
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
129844864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129844864
Membrane trafficking [BR:
sfon04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
129844864
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
129844864
RAVE complex
129844864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WD40_Gbeta
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_WDR36-Utp21_2nd
Beta-prop_DCAF12
WD40_MABP1-WDR62_2nd
Beta-prop_LRRK2
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_Vps41
NBCH_WD40
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
129844864
NCBI-ProteinID:
XP_055768998
LinkDB
All DBs
Position
Unknown
AA seq
3113 aa
AA seq
DB search
MHLHQVLTGAVNPGDCCYSVGSVNDIPFTAYGSGCDIVLLASDFECVQIIPGAQNGNIQV
GCVECSHQLGRIAASYGNTVCIFEPFATNSNKRHKQLNYQWQKTGQFFLNAISYNLAWDP
QGNRILAATERLQLWAPPSADTLIEEEDGPGTHDKPHPALNDWKCVWECKTAMSVHITKW
SPDGEYFATAGKDDCLLKVWYPTTGWRSAVVLPDLPDKKGPQVHFSFIYLAHPRSVTGLS
WRKTSKYMAKGSVCNVLLTSCEDGVCRLWSETVLPEDSILGGQITENTYSSSLPGLGGKD
KIQHALESMSHLKHLRRGRRRSSALVSHTELLPSQMGTHETHTHRHISHHANALCHFHIS
ASINPASDIPAVLAESAVFTPEDGSGGGGFVVHWLNNKDLSFTTSMDLFMLQLRKLSEQQ
LDQATDDALDQNSSPIKFDFDLDEMSEKGSSEHGEEGEGGEGSTKASSPGSSSSVPLPSM
LLERKMEALTLEWNKSPDMLFTIHPSDGSFLVWHIKYLDEYIQGIFRQVQVSFSSRIPVA
FPTGDANSLSKNILMYACSFFNVDSSNAVGEQGKRARRLPRSASAGLGSSALSLSLGQAP
GIGPAVMMVSKHVDGSLNQWAVTFAERSAFSNVLTVSHTFRYCGHRFHLNDQACHTVLPL
LLTSSHHNALLTPPSAPGSIDLDQPPTNTPPPRGRRRKQLRNAATRTFHDPNAIYSELIL
WRVDHIGPLSCTGGVSELARINSLHTSAFSNVAWLPTLVPSSVLGTYCNSSSACFVASDG
KNLRLYQAVVDARKLLDELSDPETSKLVGEVFNIVSQQSTARPGCIIELDVITNQCGSTT
QLLHVFQEDFILGYKPQEDPELYTTSYPYTEEYHPTPFSEKFFLVVIEKDLNMNSVLQMW
HLHLQSVQACVDDPVPERSYQSQLTIPFQQSTVDTSSSPLTRSASTANLQSASKLILSSK
LVCSHRLDLPVGVEVTRATPSAGHLSSSSIYPVCLAPYLIVTTCSDSRVRFWRCSVEGGE
TALGCEEGENRVYHWEPWALLNEEEDNNSAVCVPGRPVAVSCSYTGRLAVSFKQPRPGHI
AGQSHGPAGDFSMHVSIFECESTGGSEWVLEQTLHLDDFTRPSSTLDPGVSVDSNLFVYS
RSDLYMSRDHHSPNIKHYVHLDWLSKEDGSHILTVGVGSNILMYGRISGVVNEQTASKDG
VAIITLPLGGSIKQGIRSRWILLRTVDLLSSVDGTPSLPVSLSWVRDGILVVGMDCEMHV
YAQWRQDRKPGDAEGDSLSSEDNIAGGVGGSGGQTATAATTGGSSSAFKGRARSKSVFEG
NVAIDEALQAPAGLQEGGLFEAAHSLSPTLPQYHPTQLLELMDLGKVRRAKAILSHLVKC
IAGEVAVVRDVEAGEGGTRRHLSRTISVSGSTAKDTIVAGRDGGRDYTEINSIPPLPLYA
LLSADLDTSYKGGEEGAKGGKVAEVEGVRKTGGDQYTDLFQLQAVTTDDFVSFATEKVEK
KSRFINLSQYGPTYFGPEHAQVLSSQLMHSSLPGLTRLEQMFLVALADTVATTSSEVSSS
TDKQYTGGEALDECGLRYLLAMRLHTCLLTSLPPLYRMQLLHQGLSTCHFAWAFHSEAEE
EMLNMIPAMQRGDPQWSELRAVGVGWWIRNINTLRRMVEKVGKAAFQRNNDPLDAALFYL
ATKKKAVLWGLFRSQRDEKMTVFFKNNFSEDRWRKAALKNAFSLLGKQRFEQAAAFFLLA
GSLKDAVEVCLEKMEDIQLAMVVARLYEADYESSSTCQAILYEKVLGCQRDGSGYHCTKL
HPDPFLRSIAFWIMKDYTKALGTLLECIPKEDDENPDVMVKSCNPVVFSFYNYLRTHPLI
IRRHYASPEGAVTSLGLTSEKSSVDEINLIERKLFFTTANAHFKVGCPVLALEVLSKIPK
VTKKSVSSSPLSKGSSMANVSSSLPLENGNQGALDWASPAPVKANPAWGTEESSATLDWS
QPLVKVEDDGLQLDWGDDKNDDEADGGLTMKKTDVETEADEGSGGVRPPGLQREDSQNHL
CSQGESEVDVIAEQLKFRACLKILMTELRTLATGYEVDGGKLRFQLYSWLEKEIGAMHRI
CNYKVAGKEESQELERWEDGGGVEDVFEESLGGGGGTEAGAYERHQLGRRRLAAKQLHAE
RRKAWLRKNQALLRVFLSYCSLHGAKGGGVTSVRMELIFLLQESQQETTVKQLQSPLPLP
TTLPLLSASIATTKTVISNPVLHLSNHIHDILHTITQMELPPHPELMDDRVNLLHTLAAS
LSACIYQALCDSHSYSSQAEANQFTGMVYQGLLLSERRRLRTESIEEHTTPTSAPAQWPG
VSSLIALLQSAQGEDQPKLNVLLCEAVVAVYLSLLIHGLGMHAGNELFRLAAHPLSNKMW
AAVFGGGAKIIIKPKRNAEITPAAAGKARTDSSSSVTSEPDSGTKAKTAVPAPPLAEDVD
RLRRRFNMRMLVPGRPVKEVPATPPPVPAERPAYREKFIPPELSMWDYFVAKPFLPLSDS
GALYDSDESGEEDDDDDDDEDAFLSDTQMTEHSDPNSYSWSLIRLVMVKLALHNVKTFLP
LTGLDFTDLPVTSPLGNAVLKTLENWETILQERMNKFDGPPPNYINTYPTDLSTGGGPAI
LRHKAMLEPDNTPFKNKNHISFPARRLWHYLVKQEVLQETLIRYVFTKKRKQSECIEGYM
DLLSPNCVSGALRSNKVEGDLGYPGRNAKIIHKESDIIMAFAINRANTNEIVLASTHDVQ
EVDVSTLLAAQPYTWIGEDFDKESHSSDDVDYRSSHTNVAQASSTPSHFNPKDMAASASM
PWLGSGQTSMGASVIMKRNLNNVKRMTSHPIFQYYMTGAQDGSVRMFEWNRPQQLICFRQ
AGNARVTRLYFNSQGNKCGVSDGEGFLSLWQVNQTSSNPKPYVSWQCHSKTCGDFAFITS
SSLIATAGQSNDSRNVCLWDTLISPSNAMVHAFPCHESGATVVQYAPKQQLLISGGRKGF
VCVFDIRQRQLLHTFQAHDSAVKALALDVSEDFFVTGSAEGNMKVWKLAGHGLMHSFSTE
HAKQSIFRNIGAGVMQVETRPGNRIFTCGADGTLKMRVLPDRYNIPSSIFDIL
NT seq
9342 nt
NT seq
+upstream
nt +downstream
nt
atgcatctccaccaggtgctaacgggagctgtgaaccccggtgactgctgctattctgtg
gggagcgtcaacgacattcctttcaccgcctatggttcaggctgtgatatagtgctcttg
gccagtgattttgagtgtgttcagatcatccctggggctcaaaatggcaacatccaggtg
ggctgtgtcgagtgctcccaccaactgggcaggattgcagcgtcctatgggaacacagtg
tgtatctttgaaccattcgctaccaactcaaacaaacgccacaagcagcttaactaccag
tggcaaaagacaggacagttcttccttaatgctatcagctataacctggcctgggaccca
caagggaaccgtattctggcagctacagagcgcctgcaactgtgggcccctccgtcagca
gacacactgatagaggaggaggatggacccgggacccatgacaaacctcaccctgccctc
aacgactggaagtgtgtctgggagtgcaagactgcaatgtctgttcacatcaccaagtgg
tctcctgatggggaatactttgcaacagccggcaaggatgactgtctgttgaaggtgtgg
taccccaccactgggtggcgctctgctgtggtgctcccagacctcccagataagaaaggc
cctcaggtccacttctccttcatatacctggcccacccccgctctgtcaccggcctgtcc
tggaggaagaccagcaaatacatggccaagggtagtgtgtgtaatgtgttgttgacgtcg
tgtgaggacggtgtgtgtaggttgtggtctgagacggtgctgccagaggacagtatcctg
ggtggtcagatcactgagaacacatacagctccagcctgccaggcctggggggcaaggac
aagatacagcacgccctggagtcgatgagccacctgaagcacctgcgtcgtggtcgtcgg
aggtcgtctgccctggtgtctcacactgagctgctgccgtctcagatggggacccacgag
acacacacacaccgccacatctctcaccacgctaacgctctctgtcacttccacatctct
gccagcatcaaccctgcctcggacatcccagcggtgctagcggagtctgcagtgtttact
ccggaggacgggagtggaggaggagggtttgtggtccactggctcaacaacaaggacctg
tccttcacaacctccatggacctgttcatgctgcagctccgcaagctctcagaacagcag
ctggaccaagccaccgacgacgccctcgaccagaacagctcccccattaagtttgacttt
gacctagatgagatgtcagagaagggttcatcagagcatggtgaggagggggagggtggt
gagggcagcaccaaggcgtcgtccccaggctccagtagctcagtgcccctgccctccatg
ttgctggagaggaagatggaggcgttaactctggagtggaataagagtcctgacatgctg
tttaccatccaccccagcgacgggtccttcctggtctggcacatcaaatacctggacgag
tacatccaggggatcttcagacaggtgcaggtgtcgttctcgtcccgtatcccggtggcg
ttccctacaggcgacgccaactccctgagtaagaacattctgatgtacgcctgctccttc
ttcaacgtagatagctccaacgctgtgggggagcaggggaagagagcccgccggttgccc
cgttctgcctctgctgggctgggttcctcagccctcagcctctctctgggccaagctcca
ggcatcggccccgctgtcatgatggtgtccaaacatgtggacgggtctctcaatcagtgg
gcggtgacgttcgccgagcgctcggcgttctccaatgttctaaccgtgtctcatacgttc
cgttactgcggtcaccggttccacctcaacgaccaggcgtgtcacaccgtcctcccccta
ctgctgacctcctcccaccacaacgctctcctcacccccccctccgcccccggcagcatc
gacctcgaccagccacccacaaacacacctccccccagagggcggcgcaggaagcagctg
cgtaacgcggccaccaggacgttccatgacccgaacgccatctacagtgagctgattctg
tggagggtggaccacataggacccctgtcctgcactggaggggtgtcagagctggcccga
atcaactccctacacacatcagccttctccaatgtagcatggctgcctaccctggtaccc
agctctgtgctaggtacgtactgtaacagttccagtgcgtgcttcgtagcgtcagacggt
aagaacttacgtctctaccaggctgtggtggacgccaggaaactactggacgaactgtca
gaccctgagacctcaaaactagtaggagaggtatttaacatagtgagccagcagtcgaca
gccagaccaggctgcatcatagaactagatgtcatcactaaccagtgtggatctaccacc
cagctccttcatgttttccaggaggactttattttggggtataaacctcaggaggaccca
gagctctacactacatcctacccttataccgaggagtaccaccctactccgttctctgag
aagttcttcctggttgtcatagagaaggacctgaacatgaactctgtgctgcagatgtgg
cacctgcacctacagtccgtgcaggcctgtgtggatgatccggtcccagagaggtcgtac
cagtctcagctgacgatcccgttccaacagagtacagttgacacgtcttcctcccctctc
actcgctcagcctcgacagctaacctgcagtcagccagcaaactgatcctcagctccaag
ctggtctgtagccaccgtctggacctgcctgttggggtggaggtgaccagggctacgccc
tccgcaggtcacctgagttcgtcgtccatctaccctgtgtgtctggccccctacctgatc
gtcaccacctgctctgactcccgcgtccggttctggcgatgctctgtggaggggggagag
actgccctggggtgtgaggagggggagaacagggtctatcactgggagccttgggctcta
ctcaacgaggaggaggataacaacagtgctgtgtgtgtcccgggacgtcctgtagccgtg
tcctgttcctacactggacgactggctgtctccttcaaacagccccggcccggacacatc
gcgggacagagccatggtccagcaggggacttctccatgcacgtgtccatctttgagtgt
gagtctacgggggggtctgagtgggtgttggagcagaccctccacctggatgacttcact
aggccctcctctaccctggaccctggagtcagtgtagactccaacctctttgtgtacagc
aggtctgacctgtacatgagtcgcgaccaccactctcccaacatcaaacactatgtccac
ctggactggctgtccaaagaggacgggtctcatatcctcacggtgggggtgggatccaat
atcctcatgtacggtcgcatctcgggcgtggtcaacgaacagaccgcaagcaaggacggg
gtggcgatcatcaccctacctctagggggcagcatcaaacagggtatccgatcccgctgg
atcctgctgcgcactgtggacctgctctcctctgtagacggcaccccctccctgcccgtg
tccctgtcctgggtgagggacggcatcctggtggtgggtatggactgtgagatgcacgtg
tacgcccagtggcgccaggaccgcaagcccggtgatgccgagggggatagcctctcctct
gaagataacatcgccgggggggttggagggagcggagggcagacggccactgctgcaacc
acggggggatcctcgtcggcgttcaaggggcgcgcccggtccaagagtgtgtttgagggc
aacgtggcaatcgatgaggctctccaggcgccggcagggctgcaggaggggggtctgttc
gaggcggcccactccctgtcccccaccctgcctcagtaccatccaacacagctgctggag
ctcatggacctggggaaggtccgccgcgccaaggccatcctctcccacctggtgaagtgt
atcgctggggaggttgctgtggtgagggacgtggaggcaggtgagggtggaaccagacgc
cacctgtcccggacaattagtgtgagcggcagtacggctaaagacaccatcgtggccggc
cgcgacgggggacgagattacacagaaatcaactccattccccctctacccctctacgct
ctgctctctgctgacctggacacctcctataagggaggagaggagggggcgaagggaggg
aaggtggctgaggtagagggggtgaggaagacaggaggagatcagtacacagacctgttc
cagttgcaggcggtgacgacagatgactttgtgagcttcgctacagagaaagtagagaag
aagtctagattcatcaacctgtctcagtacggacccacctacttcggaccagaacacgca
caggtgttatctagtcagctgatgcattccagtcttccaggtctgaccaggttggaacag
atgtttctggtggctctagctgatactgtagctaccaccagttcagaggtcagcagctcc
actgacaaacagtacacaggtggtgaggccctggatgagtgtgggttgaggtacctgtta
gccatgcgtctacacacctgtctcctcacctctctacccccactgtaccgcatgcagttg
ctgcaccaaggtctgtctacgtgtcactttgcgtgggcattccactcggaggctgaggag
gagatgttgaatatgatcccggccatgcagagaggagaccctcagtggtctgagctacgg
gctgtaggggtgggctggtggatccgcaacatcaacacactacgcaggatggtggagaag
gtgggtaaagcagcgttccagaggaacaacgatcctttagatgcggctctgttctacctg
gccacgaagaagaaggctgttctctggggcctgttcaggtctcagcgtgatgagaagatg
acagtgttctttaagaataacttcagtgaggaccgctggcgtaaagcagctctgaagaac
gctttctctctgctggggaaacagcgctttgaacaggctgctgccttcttcctgctggct
ggctccctgaaagacgccgtcgaggtgtgcttggagaagatggaagatatccagttggcc
atggtagtagccaggctgtacgaggccgactatgagagcagttccacctgccaagccatc
ctgtatgagaaggttttgggctgccagagggatgggtcggggtaccactgcaccaaacta
caccctgacccgttcctacgcagcatagccttctggatcatgaaggactacaccaaggcc
ctgggcacgctgctagagtgcatccccaaagaggatgatgagaacccagatgtgatggtg
aagtcgtgtaacccggtggtatttagtttctataactacctgaggacacaccccctgatc
atccgccgccactacgcgtcccctgagggggctgtgacatcactaggcctcacctcggag
aagagcagcgtcgacgagatcaacctcatcgaacgcaaactcttcttcaccaccgccaac
gcacacttcaaggtgggctgtccagtgcttgccctggaggtgctctctaagatccccaag
gtgaccaagaagtcagtctcctcgtcccccctaagtaaaggctcttccatggccaacgtc
agctctagcctgcctctggagaatgggaaccagggggccctggactgggcctctcctgcc
ccagttaaggccaatcctgcctggggtacagaggagagctcagccacactggactggagc
cagcctctggtcaaagtggaggacgatggactgcagctggactggggagatgataagaac
gatgatgaagctgatggtggtctgacaatgaagaagactgatgtggagaccgaagctgat
gaggggtctgggggggtgagaccacctgggctgcagagagaggactctcagaaccatctc
tgctctcagggtgagtctgaggtggacgtgatcgcagagcagctgaagttccgagcgtgt
ctgaagattctgatgacagagctcaggacgctagctacgggctatgaggtggacgggggg
aagctgcgctttcagctctacagctggttagagaaggagataggagccatgcaccgtatc
tgcaactacaaggtggcggggaaggaggagagccaggagctggagagatgggaggatgga
ggaggagtagaggacgtgtttgaggagtccctggggggtggcgggggtacggaggcgggg
gcgtatgagcgccaccagctggggcgtaggcgtctcgcagccaagcagcttcatgctgag
aggaggaaggcgtggctaaggaagaaccaggctctgctccgggtcttcctgtcctactgc
agcctgcacggcgccaagggagggggggtcacctcggtacgcatggagctcatcttcctg
ctgcaagagagccaacaggagactacagtgaaacagctccagtcccccctgcccctcccc
actaccctccccctcctctcagccagtatcgccaccaccaagacggtgatctccaaccct
gtgctccacctcagcaaccacatccatgacatccttcacaccatcacacagatggagctg
cctccacaccctgaactcatggacgacagggtgaatctcctgcacaccctggctgcctct
ctgtctgcctgcatctatcaagccctgtgtgacagccatagctacagcagccaggcagag
gccaatcagtttacagggatggtgtaccagggtctgctgctgagtgagaggagacggcta
cgcaccgagagcatcgaggagcacactacacccacctctgcccccgcgcagtggccaggt
gtgtcctctctgattgctctgctccagtcagctcagggcgaggatcagcccaagctcaat
gtgttgctgtgtgaggctgtggtggcagtttacctgtccctgctcatccatgggctgggc
atgcacgctggcaacgagctgttccgcctcgctgctcaccccctcagcaacaagatgtgg
gcggccgtgtttgggggtggggctaaaatcatcatcaaacccaaacggaacgccgagatc
actccagcagcagcaggtaaagctagaacggactcgtcatcgtcagtgacctctgaacct
gactcagggactaaggctaaaacagccgtgccagctcctcccctggcagaggatgtggac
agactcagacgaaggtttaatatgaggatgctggttcctggtcgtccagtaaaggaggtc
cctgccaccccccctcccgtccctgcagagagacccgcctacagggagaagttcattcct
ccagagctcagcatgtgggactactttgtggccaaacccttcctgcccctgtcagacagt
ggagctctgtacgactcagatgagagcggagaggaggatgacgacgacgacgatgatgag
gatgccttcctctctgacacacagatgactgaacactctgaccccaactcatacagttgg
tctctgatccgtctggtcatggtgaaactggctctacacaacgtcaagaccttcctccct
ctcactggactggacttcacagacctgccggtgacgtctcctctggggaatgctgtgctg
aagacactagagaactgggagaccatactccaggagaggatgaacaagtttgatggtcct
cctcccaactacatcaacacctaccccactgacctcagcacaggaggggggcccgccata
ctgagacacaaggccatgctggagcctgacaacacacctttcaagaataagaaccacatt
tcgtttcctgcgaggcgtctctggcactacctggtgaaacaggaagttcttcaggagact
ctgattcgctatgtcttcactaagaagaggaagcagagcgagtgtattgaaggctatatg
gatctcctcagcccaaactgtgtatctggagctctcaggtccaacaaggtggagggagac
ttgggctatccaggaaggaatgctaagatcatccacaaggagtctgacatcatcatggcc
ttcgccatcaacagggctaacaccaatgagatagtgctggcgtccactcacgacgtgcag
gaggttgatgtgtccactctgttagctgctcagccctacacctggataggagaggacttt
gacaaggagtcacacagttctgatgacgtggactaccgttcttcccacactaacgttgcc
caggcctcctctaccccgtcccacttcaaccccaaagacatggcagcctctgcatccatg
ccctggctggggagtgggcagaccagcatgggagctagtgtgattatgaagaggaacctg
aacaatgtgaagagaatgacctcccaccccatattccagtactatatgactggggctcag
gacggcagtgttcgtatgtttgagtggaacaggccacagcaactcatctgcttcagacag
gcaggcaacgccagagtcacacgcctctacttcaactcacagggaaacaagtgtggtgta
tcagatggagaaggcttcctcagtctgtggcaggtcaaccagacctcctccaaccccaag
ccctacgtgagttggcagtgccactctaagacctgtggtgattttgccttcatcacttcc
tccagcctcatcgcaacggcaggacagtccaacgacagcagaaatgtatgcctgtgggac
actcttatttcacccagtaacgccatggtgcatgccttcccgtgccatgagagcggtgcg
acggtggtgcagtacgctcccaagcagcagctgttgatctcgggaggcaggaagggcttt
gtgtgtgtgtttgacatccgtcagagacagctgctacacaccttccaggcccacgactca
gccgtcaaagccctggcgctcgacgtctccgaagacttcttcgtaaccggctcagctgag
gggaacatgaaggtgtggaagctggcaggccatggcctcatgcactcgtttagcacagag
catgccaagcagtccatcttccggaacatcggagcgggcgttatgcaggtggagacccgc
cccggcaaccgcatattcacctgcggcgccgacggaaccctcaagatgagggttctaccc
gaccgctacaacatcccctctagcatcttcgacattctgtag
DBGET
integrated database retrieval system
