Salvelinus fontinalis (brook trout): 129845902
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Entry
129845902 CDS
T11136
Name
(RefSeq) WD and tetratricopeptide repeats protein 1-like
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
sfon
Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfon04121
]
129845902
Ubiquitin system [BR:
sfon04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
129845902
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_NOL10_N
Beta-prop_Aladin
PAC11
DSE1_N
TPR_19
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_WDR41
TPR_2
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_SPT8
ANAPC3
Beta-prop_VPS8
TPR_BSK1_C
CFAP251_N
TPR_1
TPR_17
ASA1
TRM82_WD
RMD1-3
Beta-prop_SCAP
Barstar
TPR_16
TPR_6
CFAP70_TPR_C
TPR_9
Motif
Other DBs
NCBI-GeneID:
129845902
NCBI-ProteinID:
XP_055769804
LinkDB
All DBs
Position
Unknown
AA seq
676 aa
AA seq
DB search
MTCCEAMSAVNITRDILHRQIRDKRALGFQRQYHVTDPFISRLGLEAELQGHTGCVNCLE
WNEQGDLLASGSDDQHCIIWDPFKHKKLTTMHTGHAANIFSVKFLPHSGDRILVTGAADT
KVHVHDVSVKETIHMFSDHTNRVKRIATAPMWPNTFWSAAEDGIIRQYDLRESSKRSEVL
IDLTEYCGQLVEAKCLAVNPQNNNYLAVGANGPFVRLYDMRMIHNHRKSASQSTSAGVHT
FCDRQKPIPDGAGQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPDGTELLVNMGGEQVYL
FDLTFKQKPYTYLLPKKCQITDVQNGKTTNGVSNGIHLPAGRLRFTESKVFSGSGELPPH
LERIKQQANDAFARQQWTQAIQFYSLGIHEASHNAMLYGNRAAAYMKRKWDGDHYDALRD
CLKALSLNPGHLKAHFRLARCLFELKYVAEALECLDDFKGKFPEQAHSSACDALDKDIKA
TLFSKMDSAEDKKGNSSIRFHTFSRKESIPEDEVVLRERSYDYKHRYCGHCNTTTDIKEA
NFFGSKGQYIVSGSDDGSFFIWEKETANLVRILQGDESIVNCLQPHPSYCFLATSGIDPV
VRLWNPRPETESESGNGRVVEDMEGAAAANQRRMNADPLEVMLLNMGYRITGLGGRGPEG
SDDEDSSDSQVQCRPS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgacttgctgtgaggccatgtctgctgtgaacatcaccagagacatcctgcacaggcag
atcagggacaagagagcattgggcttccaaaggcagtatcatgtcacagaccccttcatc
agtagacttggactggaggcagagttgcagggccacactgggtgtgtgaattgcctggaa
tggaacgaacagggagatctgctggcatcgggctcagatgaccaacattgcatcatctgg
gaccccttcaaacacaagaagctcaccactatgcacacagggcatgcagcaaacatcttc
tctgtgaagtttctccctcactcaggtgaccgtatcctcgtgacgggtgcagcggacacc
aaggttcacgtgcacgacgtgtcggtcaaggagaccatccacatgttctctgaccacacc
aaccgcgtcaagcgcattgctacggcccccatgtggcctaacaccttctggagtgctgcg
gaggacggcatcatcaggcaatatgacctgagggagagcagtaagcgttcagaagtgctc
atcgacctgacagaatactgtggtcagctggtggaggccaagtgtttggctgtgaacccg
caaaataataactacctagcagtgggggccaacgggccctttgtacgcctctatgacatg
cgcatgatccacaaccacaggaagtctgcgagtcagagcacatcggcaggagtgcacacg
ttctgcgacagacagaagcccatcccagacggagcggggcagtattatgtcgcagggcac
ctgccagtgaagctccctgactacaataaccgcctgagggtccttgtggccacctacgtc
accttcagtcccgacggcaccgagctgctagttaacatgggaggagaacaggtgtatcta
tttgacttgacgttcaaacagaagccgtacacctatctgcttcccaaaaagtgccaaata
acagatgttcagaatggaaagacaaccaacggtgtgtcaaatggaattcacttgccagcc
ggccgacttcgattcacagaaagcaaagttttctctggttctggcgagctgccgcctcac
ttggagcggataaagcagcaggccaatgacgcgtttgcgcggcagcagtggacgcaggcc
atccagttctacagcctgggcatccacgaggctagccacaacgccatgctgtatgggaac
cgcgctgccgcctacatgaagcgcaagtgggacggtgaccactatgatgcactgagagat
tgtctgaaagccctgtccctcaaccctgggcacctgaaggcccacttccggctggcacgc
tgcctctttgagctgaagtacgtggccgaggctctggagtgcttggatgacttcaagggc
aaattccccgagcaagcccacagcagcgcctgcgacgccctagataaggatatcaaggcc
accctcttctccaagatggactcagctgaggacaaaaagggcaacagctcaatccgcttc
cacacgttcagcaggaaggagtccatcccggaagacgaggtcgtcttgagagagcgcagc
tacgactacaaacaccgctactgtggtcattgtaacaccaccacagacatcaaggaggcc
aacttctttggcagtaaaggccagtacattgtgagcggctccgacgacggctcgtttttc
atctgggagaaggagactgctaacctggtgcggatcctccagggggacgagtctatagtc
aactgcctgcagcctcaccccagttactgcttcctggctaccagcggcatcgaccctgtg
gtgcggctctggaaccccaggccggagacggagagtgagagtgggaacgggcgcgtggtg
gaggacatggagggcgccgctgcagccaaccagcggcgtatgaatgccgaccccctggag
gtcatgctgctcaacatgggttaccgcatcacgggcctcggcggccgcgggccagagggc
tcggacgacgaggacagctcagacagccaggtgcagtgccggcccagctag
DBGET
integrated database retrieval system
