Salvelinus fontinalis (brook trout): 129846180
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Entry
129846180 CDS
T11136
Name
(RefSeq) zinc finger protein GLI1-like isoform X1
KO
K16797
zinc finger protein GLI1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
129846180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129846180
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
129846180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
129846180
NCBI-ProteinID:
XP_055770118
LinkDB
All DBs
Position
Unknown
AA seq
1785 aa
AA seq
DB search
MSLCACILYFSVCLYTVCLCVSLCVYILYVSVCLYTVCLCVSVYCVSLCVCMCMYTVCLY
TMCLYTVCLCVSVYCMSLCVSVCMYAVCLCVSVYCVSLYCMSLCVCILYVSMCLCVYVCC
VSLCVCILYFSVCFCVSVYCVSLCVYILYVSVCLYTVCLCVSVYCVSLCVCILYISVCRY
TVCLCVSVYCLCVSVLCVCILCVSVCLYTVCRYTVCLCVSVYCLCVSVLCVCILCVSVCM
YTVCFCVSVYCVSLCVSILCVSVCLYTVCLCVSVCLSSLTPSGRSAYSDVSSLRAPLHNG
QPLDCRNMYNPMTPNPRTNPNSGVNPMDQYMRPPLAPPLHSMMGHRGMNQSSDGGNSSPY
CQNNLMSSHYGFPHGHGSDHMGGGSRFSTPRSMLKLSKKRALSISPLSDASMDLHTVIRT
SPNSLVAFVNSRCGPNGGSSYGHLSVGAMSPSMGLSNSINYQSRQQGSMYGGHTPGPCHA
PPGRIPPHNPRLHAPKHGHLKTEPGLGSVMDGINMKCLEERSEGDMVSPSSTGTQDPLLG
LLDCREDLDREEKPEPEVIYETNCHWEGCSKEFDTQEQLVHHINNEHIHGEKKEFVCHWQ
ECSREQRPFKAQYMLVVHMRRHTGEKPHKCTFEGCNKAYSRLENLKTHLRSHTGEKPYVC
EHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKISGCTKRYTDPSSLRKHVKTVHGPEAHI
TKKHRGDTGPRQPGSSLTSGGQRGELLLEKEEAGHRDDCKLLAPESTLKSQPSPGGQSSC
SSERSPLGSANNNDSGVEMNLNAAGSLEDLTALEDGGAGGGCEAGGSGAGMGGMSAHALK
RLENLKIEKLKQIRRPTPPGCCGGGNKLPALTGEMMGGMCSPSSLLSNRRVMELSNHELG
GGSSGMVCPTSDRRGSGTSSMSSAYTVSRRSSMVSPYLSSRRSSEVSQLGGGGAGFLGSD
QGGGDPLPPETSCRGGPCRGVGGAGGGLPEMSSLTPAQQYSLKAKYAAATGGPPPTPLPS
MEQGPGTQRRRGGFLSEYQGQPLPAFLQYGGPRRQSANTGEYGTGVIYPHQAPGNATRRS
SDPVHSTGNPHALPKVQRFNSLNNLAMMGRRNALQNCGSDANITRHMLSPRPPSITENVM
MEAMAMDAHGGTVDARDNGMMLPPGERGFLGYQNHHMGGPSSQLSPSHDSLGCAEQGYQR
ATETSMQGGHYQGTTRGPGQGQTGQGGPIHPEGMSNSLLQQAEYSMSTCQLSPSEPHYPR
VGQGGPDGGAGPWEESSQVQTPHGALQTRMQYQDQGSMLGQAQTQGLYSSQQSLYTQGPD
GGHQNLNIKPEQQQYHPALANPDACQKQLHQQQQRPQPGQTPMPMGPMSPQSYPQQGQPG
QGMMRTTNPSCNFHGGVMENQASMQQGQQQSGGLSVGSAGLGPGGRSQTPMMQVKEMMVR
NYVQSQQALLWGQEQDQSGIAAEGNPLPLSDSMDMTGQQVAMMQQQPGPHNHQHQPQQQH
QQSLYPNPDSSFPGYSTNQNLMIPLGHRRGGPSSGSSIPPNEVPMMSLPGGPGSCYSQEM
GVPVVPRPPQGRKPLIRQISLQSQPGGGYLGSPPHLSPVQSTSSPRRAVRLPPVQRPQTH
QEIFSPSNNSNMYYSGQIHMQHPDMDKQQIQTQRITHPHQDPTQTGPCLNQHQGHLVTHM
DHQRNKSAQLGYLHESTPISNALENVDLDNAQIDFTSIIDDPDPSSFSPVNPPLHGGSSQ
TSSRLTTPQTSTTLPSSVPPNMAVGDMTSMLTSLADENKYLNTLS
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgtgtgcctgtatactgtatttctctgtgtgcctgtatactgtatgtctctgt
gtgtctctgtgtgtctatatactgtatgtctctgtgtgtctgtatactgtatgtctctgt
gtgtctgtatactgtgtgtctctgtgtgtctgtatgtgtatgtatactgtgtgtctgtat
actatgtgtctctatactgtatgtctctgtgtgtctgtatactgtatgtctctatgtgtc
tctgtgtgtatgtatgctgtgtgtctctgtgtgtctgtatactgtgtgtctctatactgt
atgtctctgtgtgtctgtatactgtatgtctctatgtgtctctgtgtgtatgtatgctgt
gtgtctctgtgtgtctgtatactgtatttctcggtgtgtttctgtgtgtctgtatactgt
gtgtctctgtgtgtatatatactgtatgtctctgtgtgtctgtatactgtgtgtctctgt
gtgtcggtatactgtgtgtctctgtgtgtctgtatactgtatatctctgtgtgtcggtat
actgtgtgtctctgtgtgtctgtatactgtctgtgtgtctctgttctgtgtgtctgtata
ctgtgtgtctctgtgtgtctgtatactgtgtgtcggtatactgtgtgtctctgtgtgtct
gtatactgtctgtgtgtctctgtgctgtgtgtctgtatactgtgtgtctctgtgtgtatg
tatactgtgtgtttctgtgtgtctgtatactgtgtgtctctgtgtgtctctatactgtgt
gtctctgtgtgtctgtatactgtgtgtctctgtgtgtctgtctgcttgtctagtcttact
ccatcaggaaggtcagcctacagtgatgtgtcatcgctccgcgctccactccacaacggc
cagcctctggactgcaggaacatgtacaaccctatgacccctaaccccaggaccaaccct
aactctggggtcaaccccatggaccagtacatgcggccccctctggcccccccactgcac
agcatgatgggacaccgcggcatgaatcagtcctccgatggtggtaacagctctccttac
tgtcagaacaacctcatgtcatcccactatggcttcccccacggccacggatcagaccac
atgggaggcggttcgcggttctccacgcctcgctccatgctgaagctcagtaagaagcgt
gctctgtccatctctcctctgtcggacgccagcatggacctccacacggtcatcaggacc
tctcctaactcactggtggcatttgtcaactcacgctgtggacccaacggaggctcctcc
tacggacatctgtctgttggtgccatgagtccgtctatgggtctctccaactccatcaac
taccagtccagacaacaaggctcaatgtacggcggacacaccccaggaccctgccacgcc
cctcccggcagaatacccccacacaacccccgactccacgcacccaaacatggacacctg
aagacagaacccgggctgggcagtgtgatggatgggatcaatatgaagtgtctggaggag
agatccgagggagacatggtcagcccttcttccactggcacacaggatcctctgctgggt
ctgctggactgccgggaggatctggatagggaggagaaaccagagccagaggtcatctat
gagaccaactgccactgggagggctgcagcaaggagtttgacacgcaggagcagctagtg
caccacatcaacaacgagcacatccacggagagaagaaggagtttgtgtgccactggcag
gagtgttccagggagcagagacctttcaaggcccagtacatgctggtggttcacatgcgc
aggcacacaggagagaaaccacataagtgtacttttgagggctgtaataaggcctactct
cgcctggagaacctgaagacccacctgaggtctcatacgggggagaaaccatacgtctgt
gaacacgagggctgcaacaaagccttttccaacgcctcggacagagccaagcaccagaac
cgcacacattcaaacgagaagccttacgtgtgtaagatctctgggtgtacgaagcgctac
acagaccccagctctctgcggaagcacgtgaagacagtccacggccctgaggctcacatc
accaagaagcatagaggagacactgggcctcggcagccaggctcatcactgacctctggt
ggacagcgtggtgaactgctgctggagaaagaggaggctggacacagggacgactgcaaa
ctgctggcacctgagagcactctgaagtctcagcccagcccgggtggccagtcttcctgc
agtagcgagcgctctccactggggagcgccaacaacaacgacagcggtgtggagatgaac
ctgaatgcagctggcagtctggaggacctgaccgctttggaggacggaggggcaggagga
ggctgcgaggcgggaggctcaggggcagggatggggggcatgtcagcacatgccctgaag
agactagagaacctgaagatagagaagctgaaacagatcagaaggccaactccgcccgga
tgctgcggtggggggaacaagctgcctgcactcacaggggagatgatgggagggatgtgt
tctccctcgtccctcctctccaaccgccgagtcatggaactgtccaatcacgagctgggg
ggtggatcctctggcatggtctgtcctaccagtgatcggagggggagtggcaccagcagc
atgagctcggcctacacagtgagccgccgttcttccatggtttccccctacctctccagc
cggcgctccagcgaggtctcccagctaggaggaggaggagcagggttcctgggttctgac
cagggaggaggtgacccccttccccctgagaccagctgcagaggaggaccctgccgtggt
gtaggtggggcaggaggagggttaccagaaatgtctagtctcacgccagcccagcagtac
agcctgaaggctaagtatgcagcagccactggcggcccaccccccaccccactacccagt
atggagcagggaccaggaacacagaggaggagaggaggtttcctcagcgagtaccagggt
cagccgctgccagcgttcctgcagtatggcggtcccaggagacaaagtgccaacacggga
gagtatggcactggggtcatctacccccaccaagccccagggaatgccacccggcgctcc
agtgaccccgtccactccactggcaacccccatgcccttcccaaggtgcaacgcttcaat
agcctgaacaacctggccatgatgggccggaggaatgccctgcagaattgtgggtcagac
gccaacatcacccgccatatgttatccccgcggccacccagcatcacagagaacgtcatg
atggaggccatggccatggacgcccatggtggaaccgtggatgccagggacaatggcatg
atgcttcccccaggagagagaggcttcctaggctaccagaaccaccacatggggggtccc
tccagccagttatcacccagccacgacagcctgggctgcgcagagcagggctatcagcga
gcgacagagacgtccatgcagggtgggcactaccagggtactaccaggggaccaggccag
ggccagacagggcaagggggacccatccacccagaggggatgtccaactccttgctacag
caggctgagtacagcatgagtacctgccagctcagcccctctgaaccacactacccccgc
gtgggccagggagggcccgatggaggtgcagggccctgggaggagagcagtcaggtccag
acccctcatggagctctccagacaaggatgcagtaccaggaccagggctctatgctgggc
caagcccagacacagggtctctacagcagccagcagagtctgtacacccaaggcccagat
ggaggccaccagaatctgaacatcaaaccagagcagcagcagtatcatccagcccttgcc
aacccagacgcctgccaaaagcagctccaccaacaacagcagaggccccaaccagggcag
acacccatgcccatgggacccatgtcccctcagagttacccccagcaggggcaacctggc
caaggcatgatgaggactactaacccctcctgtaacttccatggtggagtgatggagaac
caggcctccatgcaacaggggcagcagcaaagcgggggcctcagcgtggggtcggctggt
ctggggcctgggggccggtctcagacaccaatgatgcaggtgaaggagatgatggtgagg
aactatgtgcagtcccagcaggctctgctatggggtcaggagcaggaccagagtgggata
gcagcagagggaaacccccttcctctgtcagacagcatggacatgacaggacaacaggtg
gccatgatgcagcagcagcctggtccccataatcaccaacaccagccccagcaacaacac
caacaaagcctctaccccaacccagactccagcttcccaggttattccaccaaccagaac
ctgatgatccccctaggccatcgccgaggaggccccagctccggctcctccatcccccct
aacgaggtccccatgatgagcctgcctggagggccaggatcctgctacagccaggaaatg
ggagtccctgtggtccctagaccaccccaggggcggaagcctctcatcaggcagattagc
ctccagtcccagccaggaggagggtacctgggcagtcctccacacctcagcccagtccag
tctacctccagcccaaggagagcagtccgactgccccctgtccagcgccctcagacccat
caggagatcttctctccctccaacaatagcaacatgtattactcgggccagatccacatg
cagcaccctgacatggacaagcagcagatccaaacccaacggatcacccatcctcaccag
gacccaacccagaccgggccctgcctcaaccagcaccaggggcacctggtaacccatatg
gaccatcagaggaacaagtctgcccagctgggctacctccatgaatccacccccatctct
aatgctctggagaacgtggatctggataatgcccagatagactttacctccatcattgat
gacccagacccctcgtccttcagccccgtcaatccacctctccatggaggttcatcccag
acgtcgtcccgtctcaccaccccacagacctccaccaccctgccctcctctgtgcccccc
aacatggctgtaggggacatgacctccatgctcacctctctggctgatgagaacaagtac
ctgaatactttgtcttag
DBGET
integrated database retrieval system
