Salvelinus fontinalis (brook trout): 129849134
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Entry
129849134 CDS
T11136
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfon03400
]
129849134 (ap5b1)
DNA repair and recombination proteins [BR:
sfon03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
129849134 (ap5b1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_barrel
AP5B1_C
AP5B1_N
DUF190
Motif
Other DBs
NCBI-GeneID:
129849134
NCBI-ProteinID:
XP_055772109
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Position
3:42167778..42171574
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AA seq
964 aa
AA seq
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MSANWPERISAFLRSPSQFLCITTSDIFLAEVLHELRDDRASDLIKVLLLSPLLEHPTLL
CPSVSVGEETALELMSVFAQCSPKSLPLRCHLLLALTSVLLCSCCVSSHTSASQDFLDLL
LQMAQDTNDAQAGAALHPLRTTACDCLRELEACLPGLLSQRLELLSSLRQQENSRLHQAY
TGLHALALRNAVYLLTQQKGAGAGDLKAALGSNEGFVWGEGADSAHPNTESHSDLALFSP
LTLGPMGKVPSLQTGLDCKELRSLLSSLLEESYLLTSLSQAALLRRLVEVLAMVPAVSPT
IFRAQLLRLLGTCKVCLLHTTLLMKAAFTDSLFSAEDEAFLLKRLVGLSQHPLLSTPEKL
FYMDCILHFPENRPISSGDESLPVLLTPRLAAALVPTVFNESVSMLARLNLLSLVYLEEG
EEDREGQGGRGLAYLYDHLTSLLHIVENQASREMVVTFFRASFLFLLHFCHVERYSEDLS
QRLCDLYLRRTRLAPHLINLADRTQDRLEESGWAVALLRALQRTITEAPLSQLTLQDLRW
HLRILARVAEEGEVLQRATLNFLLCVITSSSSALCVSGDWRLGNGVLGVCRRLLLHPSLD
SLLTPLADLLQHLTCHYGETDIQDHARLYYTLLTTLSQEKLAGVLAQRGTERGRQAKVRS
LSAIMGETEELTSGLTVHQTERPLLRLVKLAKHEPDECKPEHKPDSEPACETESSPGQGG
IEDYRAQFQSSSFASEITLQYHLTHIGVHDPHFDKLFSIRLHFDLTDGHYEEVSDISVPC
LFRTRKPPTVRLRLKPKQPYHTTLRASAIFTTEDGLSWHSPLADLHVAFPEVFLPLLAPL
GWARENKQRVFEGIWGEICSGQSEGDLTNAATSLFCDQLEDLAVGELVEKHFQRYLVSDL
DKGRCKVLFFLPPQSHVLLKVITEEDAVQVHIATDNWKLLPYINSYLEDITKEMHSTQQV
NGDV
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgaactggcccgagaggatctccgcattcttgcgcagcccgtcccagttcttg
tgcatcacgacatcggacatcttcctcgctgaggtcctgcacgagttgcgagatgacagg
gccagtgacctcatcaaggtcctactgttgtccccgctacttgagcaccctactctgctg
tgcccctctgtctctgtgggagaggagaccgccctggagctcatgtctgtgtttgcccag
tgctcccccaaatccctcccgctccgctgccacctcctcctggccctcacctccgtgctc
ctctgctcctgctgtgttagctcacacaccagcgcctcccaagacttcctggaccttctc
ttacagatggcccaggacaccaacgacgcgcaggctggggctgcattacaccccctgagg
acaacggcctgcgactgcctgagggagctggaggcttgcctcccgggcctactatcccaa
cgcttggagctcctgagtagcctgaggcaacaggaaaactccaggcttcaccaggcctac
acggggctccatgccctggcactgaggaatgctgtgtatctgctcacccagcagaaaggg
gctggggctggagacctgaaggctgcactggggagcaacgaggggtttgtgtggggggag
ggtgcagactccgcacacccaaacactgagtcccactcagacttggccctcttctcgccc
ctcactctgggccccatgggaaaagttccttccctgcagacgggcctagactgtaaagag
ctgagatcgctactctcctccctcctagaggagtcctacctgctcacatccctatcccag
gctgccctgctgcgacggctggtggaggtgcttgccatggtgcctgcagtctccccgaca
atattcagggcacagctgctgcgtctattgggcacatgcaaggtgtgtcttctgcacacc
actctgctgatgaaggctgctttcacagacagcctgttcagcgcagaggatgaggccttc
cttctaaagcgtctcgtcggcctgtcccaacaccccctactgagcacgcctgagaagctc
ttctacatggactgcatcctgcacttcccagagaaccgaccaatcagcagtggcgacgag
agcctgcccgtgctcttgacccctcggctagccgcggccttagtgcccactgtgttcaat
gaaagtgtcagtatgctggctagactgaacctactctctctggtctacctggaggaagga
gaagaagacagggagggacagggggggagaggcctggcctacctgtatgatcacctgacc
tcccttctccatatcgtggagaaccaggccagtagggagatggtggtgaccttcttcagg
gcttccttcctcttcctccttcacttctgccacgtggagcgctactctgaggacctgtct
caaaggctgtgtgacctgtacctcagacgcactcggctggcccctcacctcatcaacctg
gctgaccggacccaggaccggctggaggagtcaggctgggctgtggcactgctaagagcc
ctgcaaagaaccatcacagaggccccgctgtcccagctcaccctgcaagacctccgctgg
cacctcaggatcctggcccgtgtggcagaggaaggggaagtcctccagagagccactctc
aactttttgctgtgcgtcatcacttcctcttcatccgcgctgtgtgtgagcggggactgg
cgtctggggaacggcgtgctgggggtgtgtcgacgcctgctcctgcaccccagcttggac
tcccttctcacaccgctggctgatctcctacagcacctcacctgtcattatggtgaaaca
gacatccaggaccacgcccgcttgtactacaccctcctcaccactctctcccaggagaag
ctggctggggtgttggcacagaggggaacagaaagggggcggcaggccaaagtgcgctcg
ctgtctgccatcatgggcgagaccgaggaactgaccagcggtctgaccgtgcaccagaca
gagcgaccgctgctgaggctggtcaaactggccaaacatgaaccagatgaatgcaaacca
gagcataaaccagacagtgaaccagcctgtgagactgagagttccccaggacagggaggg
atagaggactacagagcccagttccagagttccagcttcgcctctgaaatcaccctccaa
taccacctcacacacattggagttcacgacccccatttcgacaagctcttcagcatccgc
ttgcactttgacctcacggacggccactatgaggaagtgagtgacatcagcgtgccttgc
ctgttcaggaccaggaagccccctacagtgaggctgaggctgaagcccaagcagccgtac
cacaccaccctgagagctagcgctatcttcaccacggaggacggcctctcctggcactcc
ccgctggcagacctacatgtggccttccctgaggtgtttctgcccctcctcgcaccccta
gggtgggccagggaaaataagcagagggtgtttgaggggatctggggtgaaatatgctca
gggcagtctgagggggatttgaccaacgctgcaactagcctgttctgtgatcagttggag
gatttggctgtgggtgagctggtggagaagcactttcagagatatctggtctcagacttg
gataaaggcaggtgtaaagtgctgttcttcctcccaccccagtctcacgtgctgctgaag
gttatcacagaggaggatgccgtacaggttcatattgctacagacaactggaagcttctg
ccttatattaactcttatctagaggacattaccaaagagatgcacagcacacagcaagtc
aatggtgatgtctga
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