Salvelinus fontinalis (brook trout): 129849294
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Entry
129849294 CDS
T11136
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
sfon
Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfon03021
]
129849294
Transcription machinery [BR:
sfon03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
129849294
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Motif
Other DBs
NCBI-GeneID:
129849294
NCBI-ProteinID:
XP_055772198
LinkDB
All DBs
Position
Unknown
AA seq
2013 aa
AA seq
DB search
MLSLCVLYSYSEHLSCSFTFFLHGESNVCTSVEVAQHQPAYHITDDHTRLAQISSAPVQV
ILSPYGLAGSLTGQAYKMSDPAVRKLMEEWSYFYPMVLQRHREGGTGGAGTGGMGAEREG
TDRPYDPHSHVAVEVIVGGVRMIYPAAFVLVAQGDLPVEEPPPAPGAQGGSRDPSHCSIP
LTPPTSPEQPCSADSGFVTTVSSVLPAQDSAMGVTNSPKHSGKKLTNQVVHEAWKECYLN
QLQHKCSGPSSVTPKKEAPNGVPTWDFTDPEERTPCSCSRLKQQKQQQQTNTSSANPPSG
ANTTPSSGPALPPPSLLKHKATDKPEKADKQPKRAAAMTPFHHRLSVGQEACLEQDSSGG
SQLGLVSLDPPLDPMPSCKYPKPLSAGRKAPESLLHSPVSPLPPTLSPHPRGGQDPEVLE
TSVSMALCPDGASGMGLMEPSETALYAAPLGPREREAGAGWWRGFRTPRADKAEFRPPEL
PSDRVEVKTETQATEGVALKRLFMQTQKRFKISEECVRAHIQTLGLLHQPGDPGDDPYDF
KEGDIEYSFPTSKRLKGQGRDPSKRGPKGEEISNGALPDGKDAMSIFSSAPKADDDSPQD
DDAAAKAQNPSLTRETDLVVLISDLENIFDEDEEELRTACPNQHTARVLVSGSEDRREGR
VAVPYPSTVADLQRMFPTPPSLEQHPAFSPIMTYRDTPSQEPPAPSAGSDYPLGPLSSTQ
LQEYRMEVEEGMASPKPEDIKDFSFVYRVPSVQPQMGCSMFAPLRTLPSQCLPPLKLPDQ
CYYRPSWALLPKMEHYSSLPPSHHTPFIRDGYVNIPSVGDQEYSQLSASALSVGTTGGIL
PSPSPATPRFSVPTPRTPRTPRGIGTASGQGSVKQEGTGTELSSPTSTPSTSLPMSSVAE
PHTSSPPIPEAHSLYAALLLSDSVLNVFKDRNFDSCCICACNMNVKGADVGVYIPDSTLE
DQYRCMCGFSAIVNRRLAHGTGLFLEDELDIFGRGSEVGQAAERRLALCRRDPPMGDPRA
KRPQDSSPAPSSVMVLLQQQCSQPISSLASMHLPPSCSCNGRQGALIQSWMADKQWVDGS
DACVECYNALVQGQQYVDNPAGGKVDPAVVRSSALHSWPHTNMLDISMLSSQDVVRMLLS
LQPYLQDAIQKKRMGRTWENIQHVQGPLTWQQFHKMAGRGSYGSEESPEPLPIPTLLLGY
YDYYDRNFLALSPLALPFWEKLLLEPYGGQRDVAFLVLCPNSDTLLAGAQVFFQELSAVY
ETCRLGKHRPLAKVSRDGLVRVGAVDTETETEKEKEKERQEDGKVDQWFTGPWAGQQHMD
NLRKLKLYARACRRQLGPQLSALSLDSSLFIPPKHQPPLAPTPSSAQPAPSSSQPPSGPG
VPAEGEPAAAPSSGSTPTPTAAASDQPGSAEITQGGAAEAKTTPNATPPPPPPSQPAETP
ESLAERERIGIPTLADSADSHAHPPAIVIYVVDPFLCSGGAKDGGGGGEEEEGEEVEAGS
VWLLGLLRCYTEMLKTLPESMRPALVLQVVPCQYLLQPASGESPLYLQHLRALAFSAYSQ
CRRLLPTKTHIKSLTGFGPASTLESVLKSPEHPSPLQGYSPPYILGPTRAKMPEPGEVWA
EIPPRYNVLFVGYCLSHDQRWILVSCTDQQGELLETCIINIDVPNRVRRPKVSARKMGLQ
KLWDWCVGIIQMTSLPWRIVIGRLGRLGHGELKDWSALLGEHSLHSISRQLKEACRMCGI
SSADSPSILSACLVAMEPQGSIVVMPDAVTMGSVFGRSTALNLQTSQLNTPQDASCTHIL
VFPTSATTQLAASSYPTEDNADDMFDLPFPDELENDIGHDILNLHPSPNTSPVPSPGSPS
GMGGSSHFQHNRSQGERLLSRENPPEELKQQPLALGYYVSTAQADSLPHWFWASCPQAQN
QCPLFLKASLHHHISITTAQSDEPNQTTSDKTTKRTPHPLDSKTTSDVLRFVLEQYNALS
WLTCNPATQDRRSCLPVHLAVLTQMYNAVLNML
NT seq
6042 nt
NT seq
+upstream
nt +downstream
nt
atgttgtctttgtgtgttctctattcctacagtgagcacctgtcgtgctccttcaccttc
ttcctgcatggggagagtaacgtgtgcaccagcgtagaagtcgcccagcaccagcctgcc
taccacatcactgatgaccacacccgcctggcccagatctcctcagcccccgtacaagtg
atcctgagtccgtacggtctggcgggctccctgacgggccaagcctataagatgagtgac
ccagctgtaagaaaactgatggaggagtggagctacttctaccccatggtgcttcagcgc
cacagagaagggggcacagggggcgcaggcacggggggcatgggcgccgagagggagggc
actgaccgaccatatgacccacacagccatgtggccgttgaggtcatcgtaggtggtgtg
aggatgatctacccagcagcctttgtgctggttgcccaaggcgacctgcctgtggaggag
cccccacctgcaccgggagcccaggggggcagcagagacccatctcactgcagcatcccc
ctcacaccccccacctcacctgaacagccctgctcagcggacagtggctttgtgacaacg
gtgtccagcgtcctccctgcccaggacagtgccatgggggtcaccaacagcccaaaacat
tctgggaagaaactgaccaatcaggtggtgcatgaggcgtggaaggagtgttatcttaac
caactgcaacacaaatgcagtgggcccagtagcgtgacgccaaagaaggaggcgccaaat
ggggtgcccacctgggacttcaccgacccagaggagaggacaccatgcagctgctccagg
ttaaagcagcagaaacagcagcagcagaccaacacctcctctgccaaccctccgtctggt
gccaacaccaccccctcctctggcccggccctcccccctccctccctgctcaagcacaag
gccacggacaaacccgagaaagccgacaaacagccgaagagagccgccgccatgaccccc
ttccaccaccgcctctctgtgggccaggaggcctgcctggaacaagactcatctggaggg
tcccagctcggcctagtcagcctggaccctcccctggatcccatgcccagctgcaagtac
cccaagcccctctccgccggcaggaaagctccagagtccctgctccactcccctgtctcc
ccattaccccccacgctcagcccccatccacgggggggacaggaccctgaagtactggag
acctctgtaagcatggccctctgtccggatggggcgtcagggatggggttgatggaaccc
agtgagacggctctgtatgcagcccctctggggcccagggagagggaggctggggcaggc
tggtggaggggcttcaggactcccagggctgataaggctgagttcaggcctccagagctc
cccagtgacagagtggaagtaaagacagagacgcaggccactgagggagttgcactgaag
agactattcatgcagacacagaagcgcttcaagatctcggaggagtgtgttagggcacac
atccagaccttgggtctcctgcatcagcctggggaccccggggatgacccctacgacttc
aaggagggagacatcgagtacagcttccccacctccaagagactgaagggccagggccga
gaccccagcaaaagaggccccaaaggagaggagatcagcaacggtgcactgcctgatggg
aaagacgccatgtccatctttagctctgctcccaaagctgatgatgactcaccgcaggac
gatgatgcggcggccaaagcccaaaacccttctctaaccagggagactgatctggtggtc
ctcatctcagacctggagaacatcttcgacgaggatgaggaggaacttaggactgcttgc
cccaaccagcacacagccagggtcctggtatcaggaagtgaagatcggagggaagggagg
gtggctgtgccctatccttcaacagtagcagacctccagcggatgtttcccacaccccct
tccttggagcagcacccggccttctccccaatcatgacataccgtgacacccccagccag
gagcccccagccccctcggcgggctccgactaccccctgggccccctgtcctccacccag
ctccaggagtaccggatggaggtggaagagggcatggccagtccaaaacctgaggacatc
aaggacttctcatttgtgtaccgtgtcccctccgtccagccacagatgggctgctccatg
tttgctccgctgcggaccctccccagccagtgcctgccccccctcaagttgcctgaccag
tgttactaccggccttcctgggccctgctgcccaagatggagcactactcctccctgcca
ccctctcatcacaccccattcatcagagatggatatgtcaacatccccagtgttggggac
caggagtattcccagctgagtgccagcgccctgtccgtgggcaccaccggtggcatcctc
ccctcaccctcccctgccaccccccgcttttctgtccccacccctcgtaccccccgcacc
cccagaggcattggcacggccagcgggcagggctcggtgaagcaggagggcaccgggaca
gagctgagctcccctacctccacgccttccaccagcctgcctatgagctccgtagctgag
ccccatacgtccagccccccaatacccgaggcccacagcctgtacgccgccctgcttctc
tctgactcggtcctcaatgtcttcaaagaccgcaactttgacagctgctgcatctgcgcc
tgcaacatgaacgtgaagggtgccgacgtgggcgtgtacatccccgactccacgcttgag
gaccagtaccgctgcatgtgcggcttcagcgccatcgtcaaccgccggctggcccacggc
acgggcctcttcctggaggacgagctggacatctttgggaggggctcggaggtgggccag
gcggctgagaggagactggcgctttgccgcagagacccacccatgggagacccccgggcc
aagcgcccccaggactcctcccctgccccttcctctgttatggtactcctccagcagcag
tgttcccagcccatctcctccctggcctccatgcatctccctccttcctgctcctgcaac
ggccgccagggggccctaatccagagctggatggctgacaaacagtgggtggatggcagt
gatgcgtgtgtggagtgttacaacgcgctggtacaggggcagcagtatgtggataacccc
gccggagggaaagtagatccggctgttgtgagaagcagcgctctacattcctggcctcac
accaatatgctggacatcagtatgctgtcatcccaggacgtggtgcgtatgctgctgtca
ctgcagccctacctccaggacgccatccagaagaaacggatgggccggacatgggagaac
atccagcacgtacaaggaccgctcacatggcaacagttccacaagatggctggacggggc
tcctacgggtccgaggagtcgccagagcctctgcctattcccaccctgttgttgggctac
tacgactactacgaccgtaactttctggcgctgtcgcccctggcgctgcccttctgggag
aagctgctgttggaaccgtacgggggacagagagacgtggccttcctggtgctctgcccc
aactctgacaccctgctggctggggcacaagtcttcttccaggagctcagcgctgtctac
gagacatgccggttggggaaacacagacccctggccaaggtgtccagagatggcctggtg
cgtgtgggggcagtggacacagagacagaaacagagaaggagaaagagaaggagaggcag
gaggatgggaaggtagaccagtggttcacagggccatgggctggacagcaacacatggac
aacctcagaaaacttaaactctatgcccgagcctgcagaaggcagctaggtccacagttg
tctgccctgtctttggacagtagtctgtttataccccccaagcatcagcctcccttagcc
cctacgccctcctcagcccagcctgccccctcctccagccagcccccctctggccccggg
gtccctgctgagggagagccagcggcagcccctagctcaggaagcacccccacccccacg
gcagcagcctcggaccaaccaggctcagcagagattacccaaggaggggccgctgaggcc
aagactacccccaatgccacaccaccaccacccccacccagccagccagcagagacccct
gagagtttggcggagcgggagcgaatcggcatccccacgctggcggactcggccgatagc
catgcccaccccccggccatcgttatctatgtggtggaccccttcctgtgctcaggcgga
gcgaaggatggcggaggaggtggagaggaggaggagggagaggaggtggaggcgggcagt
gtgtggttactagggctgctgcgttgctacacagagatgctaaagacattgccggagagc
atgagaccagctctggtgttacaggtggtgccttgtcagtacctgctccagccagccagt
ggtgagagccctctgtacctgcagcacctgcgcgccctggccttctcagcctactcccag
tgcagacgcctcctacccacaaagacacacatcaagtctctgaccggtttcggccctgcc
tccaccctagaatctgtgctcaagagcccagagcaccccagccctctacagggctactct
cccccgtacatcctaggtcctacccgtgccaagatgccggagccaggggaggtgtgggca
gagatccctcccaggtacaacgtgctgtttgtgggctactgcctgtcccacgaccagcgc
tggatcctggtgtcctgcaccgaccaacagggagagctactggagacctgcattatcaac
atcgacgtgcccaacagagtgcggcggcccaaggtctcggccaggaagatggggctgcag
aagttatgggactggtgtgtcggcatcatccagatgacctcactgccatggaggatcgtg
attggtcggctgggcagactaggacacggggaactgaaagactggagcgctctcctgggg
gagcactccctccactccatcagtcgccagctgaaggaggcgtgtcgtatgtgcggcatc
tcctccgcggactccccctccatcctcagtgcctgcctggttgccatggagcctcagggc
tccatcgtggtgatgccagatgcggttacaatgggctcggtgtttggtcgcagcacggcc
ctcaacctgcagacgtcccagctgaacaccccccaggatgcttcctgtacccacatcctg
gtattcccaacttccgccaccacccagctggccgccagctcctaccccacagaggacaac
gccgatgacatgttcgacctgcctttccccgatgagctggagaatgacataggacatgac
attctcaacctgcacccttcccccaacacctcccccgtaccctcccctggctccccctct
ggcatggggggaagctcacacttccagcataacaggagtcagggagagaggcttctgtct
agggagaaccctccggaggagctgaagcagcagcctctagccctgggatactatgtctcc
actgcccaggccgacagcctgcctcactggttctgggcctcctgccctcaggctcagaac
cagtgtccactcttcctcaaggcatcgctacaccaccacatctccatcaccacagcccaa
tcagacgagcccaatcaaacgacctcagacaagaccactaagaggacgcctcaccctctg
gactccaagaccacctctgacgtgctcaggtttgtgttggagcagtacaacgccctctcg
tggctgacgtgtaaccctgccacccaggaccgccgctcctgcctgcccgtccacctggcc
gtgctcacacagatgtacaatgccgtcctcaacatgctctag
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