KEGG   Salvelinus fontinalis (brook trout): 129849757
Entry
129849757         CDS       T11136                                 
Name
(RefSeq) chondroadherin-like
  KO
K06248  chondroadherin
Organism
sfon  Salvelinus fontinalis (brook trout)
Pathway
sfon04510  Focal adhesion
sfon04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:sfon00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    129849757
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    129849757
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:sfon00535]
    129849757
Proteoglycans [BR:sfon00535]
 Extracellular matrix (ECM) proteoglycans
  Small leucine-rich proteoglycan (SLRP) family
   class IV
    129849757
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_1 LRR_5 LRR_9 LRRNT LRR_14 LRR_LRWD1 LRRCT LRR_NXF1-5
Other DBs
NCBI-GeneID: 129849757
NCBI-ProteinID: XP_055772515
LinkDB
Position
1:24229286..24240573
AA seq 363 aa
MRCVSFLSVWTYLLVLAPVVWGAPSQCPALCHCHGDLQHVICDNVGLKNIPQVSEATRLL
NLQRNNLGSLPTGSFASSKGLISLHMQHCQLREIGSQAFKGLKKLIYLYLSNNEITSIKP
GAFEDLAELTYLYLDGNRISDLPKGIFSPMINLFILQLNDNKLRDIKPGTFAGAKDLRWL
HMSGNEMSSLQPGSLDDVENLAILHLDRNRLSTYPGLAMSKLRVVEELSLAKNPLRSIPD
NAFQSFGRYMEKLHLDGMGLEKFSDGAFNGMKAIKSLHLDNNKLKSLPKSLEFTTITNLT
LANNPWSCTCTLAPLRKWMDSSRQRPDALCASPSSQRGKQIRDSSAFSDCTVKTKRAKKG
TRH
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgcggtgtgtgagctttctctcggtgtggacctacctgctggtcctcgccccggtggta
tggggcgcacccagccagtgcccggccctgtgtcactgccacggggacctgcagcatgtc
atctgtgacaacgtggggctaaagaatattccacaggtgtccgaggccacccgtctgctc
aacctgcagaggaacaatctgggcagcctgcccaccggctccttcgccagcagcaagggt
ctcatctcgttgcacatgcagcactgccagctccgcgagatcggcagccaggccttcaag
gggctcaagaagctcatctacctctacctgtccaacaacgagatcaccagcatcaagcca
ggtgccttcgaggacctcgccgagctcacctacctctacctggacggcaaccgcatcagc
gacctacccaagggcatcttctcgcccatgatcaatctgttcatcctgcagctcaacgat
aacaagctgcgtgacatcaagccaggcaccttcgccggagccaaggacctgcgctggctg
cacatgagtggcaatgagatgagctcgctgcagccgggctctctggacgacgtggagaac
ctggccatcctgcaccttgacaggaacaggctgtccacctaccccggtctggccatgagc
aagctgagagtggtggaggaactgagcctggccaagaaccccctgagaagcatccctgac
aacgccttccagagcttcggacgctacatggagaagctgcacctggacggcatggggctg
gagaagttttctgacggtgcgttcaacggcatgaaggccatcaagtctctgcacttggac
aacaacaagctcaagtccctgcccaagagcctggagttcaccaccatcaccaacctcacg
ctcgccaacaacccctggagctgcacctgcacgctagcccctctgcgcaagtggatggat
tctagccgccagcgccctgatgcgctctgtgcctctccgtcctcacagagaggaaagcag
attagggacagctctgccttcagcgactgcacagttaagacaaagagagccaagaagggc
acacgccattaa

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