Salvelinus fontinalis (brook trout): 129851035
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Entry
129851035 CDS
T11136
Name
(RefSeq) elongation factor 1-alpha, somatic form-like
KO
K03231
elongation factor 1-alpha
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129851035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129851035
03016 Transfer RNA biogenesis [BR:
sfon03016
]
129851035
03012 Translation factors [BR:
sfon03012
]
129851035
04131 Membrane trafficking [BR:
sfon04131
]
129851035
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfon04147
]
129851035
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
129851035
Transfer RNA biogenesis [BR:
sfon03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
129851035
Translation factors [BR:
sfon03012
]
Eukaryotic type
Elongation factors
129851035
Membrane trafficking [BR:
sfon04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
129851035
Exosome [BR:
sfon04147
]
Exosomal proteins
Proteins found in most exosomes
129851035
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
129851035
NCBI-ProteinID:
XP_055773179
LinkDB
All DBs
Position
1:24974609..24979887
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKLHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSRYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGINKMDSTEPNYSQKRYEEIVKEVSTYIKK
IGYSPDMVAFVPISGWNGDNMLEASPNMTWFKGWKITRKDGSSSGTTLLEALDAIQPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPVNVTTEVKSVEMHHEALT
EAMPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAAVFTAQVIILNHPGQISAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKALKSGDAAIVDMVPGKPMCVESFSEYPP
LGRFAVRDMRQTVAVGVIKGVEKKAPSTGKVTKSAQKAQKTK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggaaaagcttcacatcaacattgtggtgatcggccacgtggactctggaaag
tccaccaccactggccacctgatctacaagtgcggtggcattgacaagaggaccatcgag
aagtttgagaaggaggctgctgagatggggaagggctcctttaagtatgcctgggtgctg
gacaagctgaaggcagagagggagcgtggcattaccattgacatctcactgtggaagttt
gagaccagcaggtactacgtcaccattatcgatgctcccggacacagggacttcatcaag
aacatgattactggaacctcccaggcggactgtgcagtgctgatcgtggcggccggcgtg
ggtgaattcgaggcgggcatctcaaagaacgggcagacccgcgagcacgccctcctagcc
tacaccctgggggtcaagcagctgatcgtgggaatcaataaaatggactccactgagccc
aactacagccagaagcgctatgaggagattgtgaaggaagtcagcacctacatcaagaag
atcggctacagcccggatatggtagcctttgttcctatctctggctggaacggagacaac
atgctagaggccagtcctaacatgacctggtttaagggatggaagatcaccaggaaggat
ggcagttcgtccgggaccaccctgctggaagctctggatgccatccagcccccgtcccgc
cccaccgacaagcccctccgcctgcccctacaggatgtctacaagattggaggaattggc
acagtgcccgtggggcgtgtggagacgggtatgatcaagccaggcatggtggtgaccttt
gcccctgttaacgtgacaaccgaagtgaagtctgtggagatgcaccacgaggctctgacc
gaagcaatgcccggagacaacgtgggcttcaacgtcaagaacgtgtccgtcaaagacatt
cgccgtggcaacgtggccggagacagcaagaacgaccccccaatggaggcagccgtcttc
actgctcaggtgatcatcctgaaccacccaggtcagatcagtgctggctatgccccggtg
ctggactgccacaccgcccacatcgcttgcaagtttgctgagctcaaggagaagattgac
cgtcgctcaggcaagaaactggaggacaaccccaaggccctgaagtctggagatgccgcc
atcgtggatatggtcccggggaagcccatgtgtgtggagagcttctctgagtaccctcca
ctgggtcgttttgcagtgcgtgacatgcgccagacagtggcagtcggggtgatcaagggt
gtggagaagaaagctccctccactggcaaggtcaccaagtccgcccagaaggcccagaag
accaaatga
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