Salvelinus fontinalis (brook trout): 129851041
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Entry
129851041 CDS
T11136
Symbol
tmf1
Name
(RefSeq) TATA element modulatory factor isoform X1
KO
K20286
TATA element modulatory factor
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129851041 (tmf1)
Membrane trafficking [BR:
sfon04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
129851041 (tmf1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
ATG16
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
129851041
NCBI-ProteinID:
XP_055773182
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All DBs
Position
3:complement(49798701..49812410)
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AA seq
1176 aa
AA seq
DB search
MSWFSSTQLSSFAKQALTTAQKSIDRVLDIKEDEWGDTVVMPYDDLPGKTPLSGGWGMTQ
WDSTPEECTTTLPPSSEAITTPVTRMVVDETENFFSAFLPTGELQGVMDTQVVSVPPTKS
HRRPQEKDEEDKDTVVKDDVDPHKTGLTETNRLEDQEATENQAVLTESSSLWSSSEIVLV
QTPDPPVLAQGDSPDDTDSPLISESWVESTVDDTTAVSEDAQTERPFTPSETQPDYDDQI
SEPTINTELEPPFNPSPPTPPREILLEAKDPKAGDRQSDTPSPKSEDRQSNTPSPPVSAF
SSGTSTTSDIEVLDHESVQSESSASSRQEIAEAKAGLHLMQGSFQLLSASACGDFPRLED
YPKLTESCGSSSDAFERIDSFSMQSLDSRSVSEVNSDDEIPGSRTLASVTAGPTPSPPVR
VATTAQEREEEEEEQQQEEEEDEEGLTETMKDQSLDENEMEESGRSATPVNSEQPEDLIE
QESEADVTLSGPTPGHEEQLPPPITEEKRGVSTCQILELQKVIDELSSRLEKRELQLLSV
SKDKARLEEECDNLKDEVIGLKEESSSVQSLKEEFTQRIADTERKAQLACKERDIAKKEI
KGMREELSTRLNSNETMEIIREKEEQIRELLEEGEKLSKQQLQHSNIIKKLRVKEKESET
KITKQNKKLKEQEEELKHLQQVLDEKEEVEKQHRDNIKKLNVVVERQEKDMTKLQSDSEE
LLENNRSLQAALDNSYKELAALHKAKASHASEAQEAALSRETQAKEELALALVKAQEEAR
MQQDALVNQVADLRLALQRAEQQQARKEDYLREEISDLQQRLQGAETRNQELSQSVTSAT
RPLLRQIENLQASLGGQTASWEKLEKSISDRLVEAQAQLAVAVEKERAATEELMAIKAQL
ASLESQNSLLRQEKGRLHGQLDAEKTRREKLEDDSSREHVELENLRGEHTRTQEEAKKEK
LLLTNQLEMEKMKVEQEKKKCYLAQEALKEKVDLFINERKILVHSVGEPPASSTPSLSRS
SSISGVDHAGLHSSFSQEDSLGHSLGTMTMSMSGTNLYEAARLSGGSSIIENLQSQLKLR
EGEIAQLQLEIASLERTRSSMAEEMVRLTNQNEEMEDSVKEIPTLKVQLQELEQRHNTIL
QMYGEKAEEAEELRLDLEDVKNMFKTQIDELLKNQK
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgagttggttcagttctacccaactgtcaagctttgccaaacaagctttgacaacagct
cagaagtccatcgaccgagtgctggacattaaagaagacgaatggggtgacacagtggta
atgccttatgacgatctaccagggaagactccattgagtggtggatgggggatgacacaa
tgggactctaccccggaggaatgcaccacaactctccccccatcatctgaggccatcacg
acccctgtcacccgcatggttgtggatgaaacagagaacttcttcagtgcttttctgccc
acaggagagctccagggtgttatggacacccaggttgtctctgtgccgcccaccaagtcc
cacaggcggccacaggagaaggatgaggaggacaaggatactgtggttaaggatgacgtg
gaccctcacaagacaggcctgacagagaccaacagactggaagaccaggaagctactgag
aaccaggctgtcctgactgagtcctcaagtctatggtcttcctctgaaatcgttctcgtt
cagacaccagaccctccagtcctggctcagggtgattctcctgatgacactgacagtcca
ctaatcagtgagagctgggtagaatcaactgtggatgatacaactgctgtttctgaggat
gcacaaaccgaacgaccatttactccctcagaaacccaacctgattatgatgatcagatc
tctgaacccaccatcaacactgaactggagccccccttcaatccatctcctcccacaccc
cctagggaaatcttattggaggccaaagatcccaaagcgggggacaggcagagtgacaca
ccctcccctaaatcggaggacagacagagcaacaccccctcccctcctgtcagcgccttc
tcctcaggcacctccaccaccagtgatattgaggttttggaccatgagagtgtacagagt
gagagttcagccagttccaggcaggagatagcagaggccaaagcaggtctccacctgatg
cagggctccttccagcttctctcagcctctgcctgtggggacttcccccgcttggaggac
taccccaagctgaccgagagctgtggatcctcctcagatgcctttgaacgcatcgactcg
ttcagcatgcagtccctggacagccgcagtgtcagcgaagtcaactctgatgatgagatc
ccagggagccggacgctggcatctgtcaccgcagggcccacgccttcgccgcctgtcaga
gtggcaaccactgcacaggaacgggaagaagaagaggaggagcagcagcaggaggaggaa
gaagacgaggaggggctaacagaaacaatgaaggatcagtctctggatgagaatgagatg
gaggagagtggtcgcagtgccacgcctgttaacagcgagcagcctgaggacctaatagaa
caggaatcagaggcggacgtcacgctgtcaggtcccacccctggccatgaggaacagtta
cccccaccaataacggaagagaaaagaggggtgtcaacatgtcagattctggagcttcaa
aaggtaattgatgagctgtcaagccgccttgagaagagggagttacagctgctgtcagtc
agcaaagacaaggccaggctggaggaggagtgtgacaaccttaaagatgaggtgataggt
cttaaggaggagagttccagtgtgcagtctctgaaggaggagttcactcagcgcatcgca
gacacagagaggaaagcccagctagcgtgcaaggagagggatattgccaagaaggagata
aaggggatgagggaagagctgtccaccagactgaactccaacgagactatggagatcatc
agagagaaggaggagcagatccgcgaactgctggaggagggtgagaagctgtccaagcag
cagctgcagcactccaacatcatcaagaagctacgtgtgaaggagaaggagagcgagacc
aaaatcaccaaacagaacaagaagctgaaagagcaggaggaagagctcaaacacctacag
caggttctggatgagaaggaggaagtggagaagcagcacagggacaacattaagaagctg
aacgtggtggtggagcgccaggagaaggacatgaccaaactccagagtgactcagaggag
ctcctggaaaacaacaggagcctgcaggctgccctcgacaactcctacaaggaactggct
gcactgcacaaagccaaggctagccatgccagcgaggcccaggaggctgctctgagcagg
gagacccaggccaaggaggagctggctctggccctggtgaaggcccaggaggaggcccgc
atgcagcaggatgctctggtcaaccaggtggctgatctgcggctggctctgcagagggct
gaacagcagcaggccaggaaagaagactacctgagggaggagatcagtgacctgcagcag
agactgcagggggcggagaccaggaaccaagagctgagtcagagtgttacctctgcaacg
cggccgctgctcagacagatcgagaacctgcaggcctcgctggggggccagacagcatca
tgggagaaactggagaagagcatctcagatcgactagtggaagcacaggcccagctggct
gttgccgtggaaaaggagcgtgcagcaactgaggagctgatggccattaaggcccagctg
gcctcactggagtcccagaattccctgcttcgacaagagaaagggcgtctccacggtcag
ctggacgcagagaagaccaggcgggagaaactggaggatgacagcagcagggagcatgtg
gagctggagaatctgaggggagagcacactcgaacacaggaggaggccaagaaggagaag
ctcctcctgaccaatcagctggagatggagaaaatgaaggtggagcaagagaagaagaaa
tgctacctagcacaagaggccctgaaggaaaaggtagatctatttatcaatgagcggaag
atattggttcactctgtgggtgagcccccagcctcatccaccccctccctgtcccgttcc
agctccatcagcggggtagaccatgccggcctgcactcctccttctcccaggaggactct
ctgggtcactcgttggggacgatgacgatgtctatgagtgggaccaacctgtatgaggcg
gctcggctcagtggaggctccagcatcatagagaacctgcaatcccagctcaaactccga
gagggagagatagcacagctacagctggagatcgctagtctggagaggactcgctcgtcc
atggcggaggagatggtcagattgaccaatcagaatgaggagatggaggacagtgtgaag
gagatccccacactgaaagtacaacttcaggagctggagcagagacacaacaccatcctc
cagatgtatggagagaaggctgaggaggcagaggagctgagactcgacctggaggacgtc
aagaacatgttcaaaacccagattgacgaactgctcaagaaccagaagtag
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