Salvelinus fontinalis (brook trout): 129851116
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Entry
129851116 CDS
T11136
Name
(RefSeq) class E basic helix-loop-helix protein 40-like
KO
K03729
class B basic helix-loop-helix protein 2
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129851116
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
129851116
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GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
YabA
Oscp1
DUF6809
DUF7809
Motif
Other DBs
NCBI-GeneID:
129851116
NCBI-ProteinID:
XP_055773364
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Position
3:complement(53283815..53287683)
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AA seq
398 aa
AA seq
DB search
MERITSAQPPPCMAKHQSQEMADMQGKDFPKYVYKHRKGMKRVEDSKETYKLPHRLIEKK
RRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALSTLLEQQQQKIIALQI
SDQRSVRSENSEEMFRSGFHVCAKEVLQYLANQGSSRDHLTPSEMISHLHKVASEVLQGP
FSPRSEEPTHKPIDSMEKPAGHMPKGKEGHPKNFVSVIQRTYPHGHGEQSGNDTDTDSGY
GGEHEKRDLKAQRSSYYGKEGELKYALAERMAGGGVKQEGAEPQAKRLKADYSEDESSSG
QVVSSHHSYMSFSQHQTPLCVPFYLIPQAAASWPMMEKCWFPGGMPFLYPGMNVSAASLS
PEKIPQNVVMSPRAGSPTLYQAPMDSPTLLQALKQAPP
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggagaggattacaagtgcgcaacctcctccttgtatggcgaaacaccagtcgcaggag
atggcagacatgcaaggaaaggatttcccaaagtacgtgtacaaacaccgaaagggaatg
aagcgcgtggaagacagtaaggagacatacaagttaccccaccgattgattgagaagaaa
agacgtgacagaatcaatgaatgcattgcccaactgaaggatttactgccagaacatctc
aaactcacaactctaggccatttggagaaagctgtggtgttggaactcaccctgaagcat
gtgaaagccctgagcactctcctggaacagcagcagcagaaaatcattgcattgcaaatc
agtgatcagagaagtgtccgctcagagaacagtgaggagatgttccgctctggcttccat
gtctgtgctaaggaggtcctccagtacctggctaaccaggggagcagcagagaccacctg
accccctctgaaatgatcagccacctccacaaagtagcatcagaggtgctccagggtcca
ttcagcccccggtccgaagagcccacccacaaacccatcgatagcatggagaagcctgct
ggtcatatgcctaagggcaaggagggtcaccccaagaactttgtgtctgtcattcaaagg
acatacccccacggacatggagagcagagtggcaatgacacagacactgacagcggctat
ggaggggaacacgagaaacgggacctcaaggcccaacgctcaagctactacggcaaggag
ggggagctcaaatatgctctggctgagaggatggcaggaggtggcgtcaagcaggagggt
gccgagccccaggccaagaggttaaaagctgactactcagaggacgagtcttcctctggg
caggtggttagcagccatcacagctacatgagcttctcccaacaccagacccccctctgc
gtgcccttctacctcatcccccaagcagctgcatcgtggcccatgatggagaagtgctgg
ttcccagggggcatgccctttttgtacccgggcatgaatgtctcagcagccagcttgtct
ccagagaaaatacctcaaaatgtagtaatgtctcccagggcaggttccccgacactctac
caagcacccatggactcaccaaccctcctccaagctttaaaacaagcccccccatga
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