Salvelinus fontinalis (brook trout): 129851215
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Entry
129851215 CDS
T11136
Name
(RefSeq) transmembrane channel-like protein 5
KO
K21988
transmembrane channel-like protein
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfon02000
]
129851215
03037 Cilium and associated proteins [BR:
sfon03037
]
129851215
Transporters [BR:
sfon02000
]
Other transporters
Pores ion channels [TC:
1
]
129851215
Cilium and associated proteins [BR:
sfon03037
]
Other cilia and associated proteins
Stereociliary proteins
129851215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
129851215
NCBI-ProteinID:
XP_055773575
LinkDB
All DBs
Position
3:complement(59215743..59242832)
Genome browser
AA seq
1018 aa
AA seq
DB search
MSHYNNTGGYNNTAYHDSDTLEIDRSPSRKSHSHHSNPHGNPYPRDDGAAGERGRSDLQQ
LPGGVQSSYDDAQERVPWGGWQEGSWRGRDSIPMGLLPPRSESPRWQQHDLNHSGYQIDQ
ATHYDTTPPVRLPSASSGHVSMRFRGSRKMSLFPVGEAALGNLGLSEDDIRNEMENEEHN
LVQELVAMSTRDRIKAIRDLPMSFDDKKHIRGQVLALKSFKKSRQLNCFSDCSTTVSLAF
RRCGANMTLARQTLELWRGTMKEVGGKFGTGVLSYFKFLKWLLMFNIFSFLVNFGFITIP
QLIYHPTPDIPAGVSFRGLEILTGAGYFSHTVMYYGGYSNKTQGTGGWPEYNMQLAYFFT
IAAYMVLCGAALIYSMASSFRNKYVLADSGLGGAWQLLCSWDFSVTNEKAVRQRKNNLRI
QLKESLSEKIQVALLPLTERLKHYGVFLGTWLLSTGMALGCGASVYFLCQYDTSRTRKSA
DKASGSLLEEAATLLLPFVVSLINLVVPLFYSLFKKIEHYSNPRMQVYAIIVRNVILKMS
ILAILCYYWMKDVANTFSCWESIVGQALYRLVIMDFLFVMLGSFFGEFLSNVIGTKCIQS
LGVPEFDVARNVLDLIYAQTLAWIGIYFSPLLPVIQIIKFFILFYLKKVSLTQNCQPPRR
AGRAAQMQTIFIAILFFPSFVGALSMVAYTVWTLPPSDKCGPFRGLNTTFSAVQIWMDDL
NGVDAFQWTVWIYQHVIRSEIFYFLVSLIILVFIYIFRQITEGRRLLIILLRQQIVNEGK
DKAFLLEKLQTLQKSKQNKQKKKKQVRKRQENESSTGMQQALIARQRLEQENGDSSSSFG
VPMPSGHSVSTTSSAMMQAMLARQYAEDQDVASYRGVPFPADQTPASSSALIQAMQARQR
AESQNEDEFYRAPVQSQNPVNALPSAMIQVMQARQRAESEQEEDEFYRAPVHSEHPVSST
SSAMMQVMQARQRAEEEESECYRAPASSQHPDASGTGSALIQAMLARQQVEEEYGDRY
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcactacaacaacactggaggatataacaacactgcctatcatgacagtgacacc
ctggagatagataggagtccttccaggaaatcccactcccatcacagtaacccccatggt
aacccctaccccagggatgatggagccgcgggggagaggggcaggtccgaccttcagcag
ctcccaggaggggtccagtccagctacgacgatgcccaggagagagtgccctggggcggg
tggcaggaggggagctggaggggcagagacagcattcccatgggtctccttcctccccgg
tcggagagcccacgatggcagcagcatgacctcaatcacagcgggtaccagatcgaccag
gcaacgcattatgacacaacgcctcctgttcgacttccatctgcatcttcaggtcatgtt
tcgatgaggttcagggggtcgaggaagatgagtctattccctgtaggagaagctgctctg
ggcaatctgggcctttctgaggacgacatcaggaatgagatggaaaatgaggaacataac
ttggtccaagagctggttgctatgtcaacgagggacagaatcaaggccatccgagacctc
cctatgagctttgatgacaagaaacacatcaggggccaagtgttggcgttgaaatcattc
aaaaagtcccggcaactgaactgcttttcagactgctcgacgactgtctcattggcgttc
cgcaggtgcggtgctaacatgactttagccaggcagaccctggaactgtggcggggtacc
atgaaggaggtcgggggtaaatttggcacgggggtcctctcctacttcaagttcctaaaa
tggctgctgatgttcaacatcttctccttcctggtcaactttggtttcatcaccatcccc
cagctcatctatcaccccacgccagacatccccgctggggtcagcttcagagggctagag
atactgaccggagcgggttatttcagccacacggtgatgtattatggcggctacagtaat
aaaacacaaggtacagggggctggccagagtacaacatgcagctggcctacttcttcacc
atagcagcctacatggtgttgtgtggagccgccctcatctacagcatggccagctcgttc
aggaataagtatgtccttgcagactcaggcttgggtggagcctggcagctcctgtgtagc
tgggacttcagtgtgactaacgagaaagccgtacgacagcgcaagaacaatctgcgcatc
caactcaaggagtccttatcagaaaagatccaggtggccctgctacctctgacagagagg
ctgaagcactatggggtcttcctgggtacctggctcctctccacgggcatggccttgggc
tgtggcgccagtgtctacttcctgtgtcagtatgacacatcgcggacgaggaagtcagcg
gacaaagcttccggctctctcctggaggaggccgctactctcctcctcccctttgtggtg
tccctgatcaatctggtcgtccctctcttctactctctgttcaaaaagatagaacactac
tccaaccctcgcatgcaggtctatgccatcatagtcagaaatgtcattctcaagatgtcc
attctggctattctctgctactactggatgaaggatgtggccaatacattttcatgctgg
gagtccatcgtaggacaagccttgtacagactggtgattatggacttcctcttcgtaatg
ttaggatccttctttggagagttcttgagcaatgtcattgggactaaatgcatacagagc
ctgggagttccagagtttgacgttgccaggaatgtccttgacctgatctatgcacagacc
ctggcatggatcggaatctacttctctcccctcctcccagtgatacagataatcaagttc
ttcatcctcttctacctaaagaaggtcagcctgacccagaactgccagccccccaggcga
gccggcagggcggctcagatgcaaaccatcttcatcgctatcctcttcttcccttccttc
gtaggggctctgtccatggtggcctacaccgtgtggactctgcccccctcagacaagtgt
gggcccttcaggggcctcaacaccaccttcagtgcagtacagatctggatggacgatctg
aacggggtggatgcgtttcagtggactgtctggatctaccagcacgtcatcaggagtgag
atattctacttcctggtctctctcatcatccttgtcttcatttacatcttcaggcagatc
actgagggacgccggctgcttatcattctactgagacagcagattgttaatgaagggaag
gacaaggcattcttgttggagaagctacagacccttcagaaatccaagcagaacaaacag
aaaaagaaaaaacaggtcaggaaaagacaggaaaatgaatcctccactggcatgcaacag
gctctgattgcccgacagcggttggagcaagagaatggcgacagcagcagctctttcggt
gtgcctatgccttccggccactcagtctctacgacatccagtgctatgatgcaggccatg
ctagccaggcaatacgcagaggaccaggatgtagccagttatcgcggggtgccatttcct
gcagaccaaacacctgcgtcctccagtgcactgatacaggccatgcaagccaggcaaagg
gcggagtcacagaatgaggacgagttttaccgggcgccagttcagtcacagaacccagta
aacgcattacccagtgcgatgatacaggtgatgcaagccaggcagagggcggagtcagag
caggaagaggacgagttttaccgggcgccagttcattcagaacatccagtgtcatcaacg
tccagtgcgatgatgcaggtcatgcaagccaggcagagagcagaggaggaggagagcgag
tgttaccgggcgcctgcttcttcacagcacccagatgcatcaggcactggtagtgctctg
atacaggccatgctagcccggcaacaggtagaggaggagtacggtgacagatactga
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