Salvelinus fontinalis (brook trout): 129851216
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Entry
129851216 CDS
T11136
Name
(RefSeq) transmembrane channel-like protein 6 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfon02000
]
129851216
03037 Cilium and associated proteins [BR:
sfon03037
]
129851216
Transporters [BR:
sfon02000
]
Other transporters
Pores ion channels [TC:
1
]
129851216
Cilium and associated proteins [BR:
sfon03037
]
Other cilia and associated proteins
Stereociliary proteins
129851216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
129851216
NCBI-ProteinID:
XP_055773578
LinkDB
All DBs
Position
3:complement(59317188..59380335)
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AA seq
861 aa
AA seq
DB search
MVDRQTDKENETDRRGETEREMAHNVNFDLTAQHMEAGLESPADEEGVHDSFNQLIEDQR
QEAFELQELQRDLDEEERDRVAYLSSPGREMWRGSQGRGEEEEGRQLDPLIEERWSSATL
KVLSSMPSRTIGRSRGAIISQYYNKTMKLRRRRQSRPSIKDFSRSARPSIRGYGMESDCM
ETEGVDEEGRKRDQLVNNLQNLSLSDRVRMLRAMPLSVAEKSELRRLAGRKGQRSNHSQI
PCCSQLKYHIIIALRQSWYSCLSFLHSLQLWQVALKRVSGRFGTGVLSYFLFVKTLLFFN
IFLFLVTGLFLALPQAVHPPTLTQGHEAFSGLELLTGGGYFSDSVMYYGYYSNSTLYKDC
RVTSSSMDQQPSPSVSRRTMETDCGVKLSYNMPLAYFFTIGVAFFITCIILVYSMSKSFG
QSFRIDKSHGILAMKVFCSWDFKVIKKTSVKLRSENICTQLRELLEETNRKHVQKTVCQR
TGRVLVHVLAWFICIGSTVACVLALYYFSEYMHKDLQYRSRIPTKDPLLKEASLLALPVV
VSLINLLLPGLFNATAWMEEYDSPSVNTYVAISRNLMLKVSVLVVLCFHWLGRIASDPHS
IGLQCWESFVGQELYRFLLMDFIFTILDTCFGEFLWRLFSQRVLKRKRKPVFDISRNVLE
LIYGQTLAWLGVLFTPLLPAVQIIKLLLLFYMKQTSVMMNCQSPRKPYRASQMSTIFITL
LCCPSFLGAAVCVSYTMWSIRPSESCGPFRSLSTMFQSGKLWVKELETHSPNLAWLAWAH
SYIVENPLFLFLAAGIFLIVIYFNTQVVDGQRKIISLLQEQIENEGEDKKFLITRLQAIH
QQKRPLSPRRLTSQVSQDSNG
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggttgacagacagacggataaagagaacgagacagacaggagaggagagacggagaga
gagatggctcacaacgtcaactttgacctgactgctcaacacatggaggctggcctggag
agcccagcggatgaagagggggtccatgactcctttaaccagctgatagaggatcagaga
caggaagcctttgagctgcaggaactacagagagacctggacgaggaggaaagagacagg
gtagcgtacctgtccagccctggtcgggagatgtggcgtgggagccaggggagaggtgag
gaggaggaggggagacagttggacccccttatagaggaacgctggtcctccgctaccctc
aaagtcctctcctccatgcccagccgcaccatcggtcgtagtcgaggtgctattatctct
cagtactataacaagaccatgaagttgagaagacgcagacagagcaggccttccataaaa
gacttttcccgctctgcacggcccagtatccgtggttacggcatggagtcagactgcatg
gagaccgagggcgtggatgaggaggggcgtaagcgtgaccaactggtcaacaaccttcag
aacctctctctgagtgaccgggtcaggatgctgcgagccatgcctctctctgtggcagag
aagagtgaactcaggaggttggctggcaggaagggtcaacgctccaatcacagtcagatc
ccgtgctgcagccagctcaagtatcacatcatcatcgctctgagacagagctggtacagc
tgtctctccttcctccactccctgcagctgtggcaggtggcgctgaagagggtgagcggt
cgtttcggcaccggcgtcctctcttacttcctgttcgtcaagaccctcctcttcttcaac
atcttcctgttcctggtcacgggtttgttcctggccctgccccaggcagtacaccccccc
acgttaacccagggacacgaagccttctctgggctggagctgctcactggagggggttat
ttctcagactcagtgatgtactatggttactatagtaactctaccctgtataaggactgt
agagtcactagtagcagtatggaccagcagcccagtccctctgtatctagaaggacaatg
gaaacagactgtggagtgaagctgtcctataacatgcccctggcatacttcttcaccata
ggagtggctttcttcatcacctgcatcatcctcgtctacagcatgtccaagtcgtttggt
cagagcttccgtatagacaagtcacatggtatcctggcgatgaaggtgttctgttcctgg
gactttaaagtcatcaagaagacctccgtcaaactccgctctgaaaacatctgcactcaa
ctcagggagttgttagaggagactaatcgtaagcatgtccagaagactgtgtgtcagaga
acaggacgtgtgttagtacatgttctggcgtggttcatctgtataggcagcacagtggcc
tgtgttctagctctctactacttctctgagtacatgcacaaggacctccagtacagatct
cgtattcccactaaggaccctctcctgaaggaagccagtctgttagccctgccggtcgta
gtgtctctcatcaacctcctgctccctggtctcttcaacgctactgcctggatggaggag
tacgactcgcccagcgtaaacacatacgtcgccatcagcaggaacctgatgttgaaagtg
agcgtgctcgtagtgctgtgctttcattggctgggccggatcgcttctgacccccacagc
atcggcctgcagtgctgggagagttttgtaggacaagagctgtaccgtttcctcctcatg
gacttcatctttaccatactggacacctgctttggagagttcctctggaggttgttttct
cagagggtgttgaagaggaaaagaaagcctgtgtttgacatctccaggaacgtgttggaa
ctcatctacggacagacactggcctggttgggggtgttgttcactcctctgcttcctgct
gtacagatcatcaaactgctgcttctcttctacatgaagcagactagtgtgatgatgaac
tgccagtcccctaggaagccctatagagccagtcagatgagcaccatcttcatcactctc
ctctgctgcccttccttcctgggggctgctgtttgtgtcagctacaccatgtggagtatc
cgtccgtctgagtcatgcgggccgttccgtagcctgtccactatgttccagtcagggaag
ctgtgggtgaaggagttggagacacacagccctaacctggcctggttagcctgggctcac
agctacatagtggagaaccctctgtttctgttcctggctgctgggatcttcctgatagtg
atttacttcaacacccaggtggtggatggacagaggaagataatcagtctgctgcaggag
caaatagaaaacgagggggaggataagaagttcctgatcactcgtctccaggccatccac
cagcagaaacgacccctctcccctcgcagactcaccagtcaggtcagtcaggattccaac
ggctag
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