Salvelinus fontinalis (brook trout): 129851366
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Entry
129851366 CDS
T11136
Name
(RefSeq) semaphorin-3D-like
KO
K06840
semaphorin 3
Organism
sfon Salvelinus fontinalis (brook trout)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Ig_6
ig
I-set
Ig_3
Ig_2
Motif
Other DBs
NCBI-GeneID:
129851366
NCBI-ProteinID:
XP_055773832
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Position
3:68089640..68224348
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AA seq
777 aa
AA seq
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MKMRILGPGRFCVLLGVSLQLLLLLPDTSSTAATWRQSGPRLQLSHTELHGRNSSSVFWD
RGVSGGYQALLLDEDRGWLLVGGRDHVYLLHSNSLALPTRTIYWPAATEHVEHCRLAGKN
LSTDCANYVRLLQPFNKTHVYVCGTGAYHPQCTYIDLGRSIEEPSFHLLSHAVESGRGKC
PFSPREPFTARLTDGDLYAGTSVDFMGTNTAIFRTSVHSSKQHYIRTEAYQDHWLNEPEF
VGSFSIPDTHSVDDDKVYIFFKETAVESSQWDKRVYNRVARVCKNDVGGKRSLINRWSTF
LKARLVCSVPGPVGLDTQFDELEDVFMLETKDSQNPIIYGVFSTSSSVFRGSAVCVYSMA
SIRAAFNGPFAHKEGPDYRWVEYKGRIPYPRPGTCPSVTYDPLHKSTRDFPDDVVSFMRG
HHLMWEPILPVTRRPVFTLVNVSYTLRKLVVDRVDAADGQYDVLHLGTDDGQVLKVVSVP
KENREPEEIILEQLTVFQNHAPILSMELSTKRQQLYVSSDEGVAQLPLQRCELYGRDCAD
CCLARDPYCVWDGTTCNRYFPSNKRRARRQDVKHGDSMSQCHNAEDGSESVELKVIYGVQ
RSSTFLECMPRSQQATVKWTVQPSHARTSRELHQSEDRMVHMKRGLLVQRLEPGDAGLYS
CTTLEHSFSQVQARYNLQVIPQQSMTASQARASDPGAGGAGLRGGPGGPGSHTQRHTKLL
RNYKDLHMVGMASMSANEYCEQLWYREKKKLRQLKWKQSQVDNGKARVRRHDSTRLQ
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaggatcctggggccagggaggttctgtgttctgctgggtgtgtccctccaa
ctgttgctgttgctaccagacacctcctctaccgctgcaacctggagacagagtggaccc
cgtctgcagctctcacacacagagttgcatgggaggaacagttccagtgtgttctgggac
cggggtgtgagtgggggttaccaggccctgctgctggatgaggaccgtggctggctgctg
gtgggaggaagagaccacgtctacctgctgcactctaacagtctggctctacctacacgc
acgatctactggccagctgcgacggaacacgttgagcactgcaggctggcagggaagaac
ctgtcgactgactgcgccaactacgtgcgtctcctccagcccttcaataagactcatgtg
tacgtctgtggcaccggggcctaccacccacaatgcacctacatagacctgggacgcagc
attgaggagccatcgttccacctgctgagccatgctgtggagtctggacgggggaaatgc
ccctttagtccacgggaacccttcaccgccaggctcactgatggagatttgtatgccggg
acatcagtggatttcatgggcaccaacacagctatattccgtacctctgtgcacagcagc
aaacaacactatatacgcactgaggcctaccaggaccactggctcaatgagccagagttt
gtgggttccttctctatcccagacacacacagtgtggacgatgacaaagtctatatcttc
ttcaaggagacagctgtagagtccagccagtgggacaagagggtttacaacagagtggca
cgcgtctgcaagaatgacgttggagggaagaggagtctgattaaccgttggagtacgttc
ctcaaggcccgtctggtgtgttccgtaccaggacctgttggactggacacacaatttgac
gagctagaggatgtcttcatgctggagaccaaagactcccagaaccccatcatctatgga
gtgttctccacctccagttctgtattcagagggtcagcagtgtgtgtctactccatggcc
tctatcagggcagccttcaacggtccgttcgcccataaggaagggcccgactaccgctgg
gtggagtacaaggggaggatcccatatccacgacctggcacttgtcccagtgtgacctac
gaccccctccacaagtctacgcgtgacttccctgatgacgtagtgagtttcatgaggggt
catcatctgatgtgggaacccatcctacccgtcacccgccgcccggtctttacccttgtc
aacgtatcctacaccctacgaaagttggtggtggatagggtggacgctgcggatggccag
tatgatgtactacacctgggcacagatgatggccaggtgctgaaagtggtgtctgttcct
aaagagaacagggagcctgaggagatcattctggagcagctgactgtgtttcagaatcac
gcccctatccttagcatggagctgtctaccaaacggcaacagctgtatgtgagcagtgat
gaaggagtggcccagttacccctgcagcggtgtgagctgtacggtagagactgtgctgac
tgctgtctggccagagacccttactgtgtctgggacgggaccacatgcaaccgatacttc
cccagcaacaagcggcgggctcggcgccaggatgtgaaacatggggattcaatgagccag
tgtcacaatgcagaagatggttctgagtcggtggaactgaaggtgatctatggggtgcag
aggagctcaaccttcctggagtgtatgcccagatcccaacaggctacagtcaagtggaca
gttcagccgtcacacgctcgcactagcagagagctgcaccagagtgaggatcgtatggtc
cacatgaaacggggtctcctggttcagcgactggagccaggggacgcaggcctctacagc
tgtaccaccctggagcactccttctcccaggtccaggcccgctacaacctccaggttata
ccccagcagagcatgacagcatcccaggccagggcatctgatcctggggccggaggggca
gggctgagggggggccctggaggtcctgggagccacacccagagacacaccaagctcctc
aggaactataaggatctgcacatggtgggcatggctagcatgagcgcaaacgagtactgt
gagcagctgtggtaccgggagaagaagaagctacgccagttgaagtggaaacagagtcag
gtggacaacggcaaggccagggtacgacggcacgactccacccgactacaatga
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