Salvelinus fontinalis (brook trout): 129851528
Help
Entry
129851528 CDS
T11136
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
129851528
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfon02000
]
129851528
Transporters [BR:
sfon02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
129851528
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
129851528
NCBI-ProteinID:
XP_055774130
LinkDB
All DBs
Position
3:31931910..31962160
Genome browser
AA seq
618 aa
AA seq
DB search
MEKHNDPNLRFNKLSQQEMGLVQPVPVPSTQTRGQWSSKLEFLLAVAGQIVGLGNVWRFP
YLCYKNGGGVFFIPYVLFLFICGIPLFLLETSLGQYTTQGSITCWRKICPLFEGLGYGSQ
VVVIYSSIYYIIILAWAFFYLFSSFSSELPWASCSNSWNTATCMEFDRRVVGHLNWTVAG
NATSPVREFWERRVLNLTDSPNKLGSVRWELALCLLLSWILCYFCVWKGVKSSGKVVYFT
ATFPYLMLLVLLVRGLTLPGAIDGIKFYLYPDPARLTDPQVWMDAGTQMFFSYAICLGCL
TALGSYNKYDNNCYKDCVYLCLLNSGTSFVAGFVIFSVLGFMAYEQGTDISTVAESGPGL
AFIAYPRAVAMMPLPQLWAIFFFIMIILLGLDSEFVGLEALMTAISDMNPSFFLVGHRRK
ILLLIISVGSFFIGLVMVTEGGLYIFQLFDYYACSGMTLLLFAILQSVCISWVYGADRLY
DNIEDMIGYRPLPIIKYCLKYFTPVMCTVTFVFSLMKLAPLKFNNTFQYPWWGSAVGWWF
TLSSTLMVPLWMVYIVSVTPGTLRQRLSILTTPSQDLPMTKAQKNSHLTKQSEQDRPLGD
MEIPAWGHNLLDRDTGPL
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcataatgatcccaatttgaggttcaataagctttcccagcaggagatgggt
ctggtccagcctgtccctgtgccaagcacccagaccaggggacagtggtccagcaagcta
gagttcctcctggctgtggccggacagatcgtaggcttggggaatgtatggaggttccca
tatctgtgctacaaaaatggaggaggggtgttcttcatcccttatgtgctctttctgttt
atctgtggcattccactctttctcctggagacctccctgggccagtacaccacgcagggc
agcatcacctgctggaggaagatctgccccctgtttgaaggactgggttatggtagtcag
gtggtggttatatattccagcatctattacatcatcattctagcctgggccttcttctac
ctcttctcctcattcagctctgagctcccctgggccagttgtagtaacagctggaacaca
gcaacctgcatggagtttgacagaagagtagtgggacatctaaattggacagtagcagga
aatgcaacatcgccagtgagagagttctgggagagaagagttttgaatctcacagacagt
ccaaacaagctaggcagtgttcgctgggagctggctctgtgtcttctactgtcatggatt
ctctgttacttctgtgtctggaaaggagtgaagtctagtgggaaggtggtctacttcact
gccaccttcccctatctgatgctgctggtgttgctggtccgtggactcacactgccgggg
gcaatagatggtatcaagttctacctctacccagacccagcccgcctcacagacccacag
gtgtggatggatgctggaacacaaatgttcttttcctatgctatctgcctcggctgcctg
actgctcttggcagctacaacaaatatgacaacaactgttacaaggactgtgtgtacctg
tgcctgttgaacagtggaaccagctttgtggccggttttgtaatcttctctgttctggga
ttcatggcttatgaacaagggacagacatctcaacggtggccgaatcaggtcctggcctg
gcattcatcgcctaccctcgtgccgtggccatgatgccattaccccagctttgggccatc
ttcttcttcatcatgataatcctactggggttagacagtgagtttgtaggtctggaggct
ttgatgacagctatctcagacatgaatccctccttcttcctggttggccatcggcgtaaa
atcctcctcctcatcatcagtgtgggtagcttcttcattggcctggtcatggtcacagag
ggaggcctgtatatcttccagctgtttgattactatgcctgcagtgggatgactctgctt
ctcttcgctatactacagtcagtgtgtatcagctgggtttatggtgcagaccgtctgtac
gataatatagaggacatgatcggttatcgaccattacccatcattaagtactgtttgaag
tatttcactccagtcatgtgcactgttacatttgtcttctccttgatgaagttagccccg
ctgaagttcaacaacacctttcagtatccttggtggggttccgctgttggctggtggttc
actctctcctccaccctcatggttcctctatggatggtgtacatcgtgagcgtcactcct
ggtacactgcgacagagactgtccatcctcaccacgccgtcacaggatctccccatgacc
aaggcccagaagaattcccacctgaccaagcagtcagagcaggacagacccctgggggac
atggagataccagcctggggccacaacctcctagacagagacactggccccctgtag
DBGET
integrated database retrieval system
