Salvelinus fontinalis (brook trout): 129852713
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Entry
129852713 CDS
T11136
Name
(RefSeq) basic helix-loop-helix ARNT-like protein 1 isoform X1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129852713
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
129852713
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
PAS_2
bHLH_INO2
bHLH_NCOA
bHLH_NPAS4
PAS_8
Motif
Other DBs
NCBI-GeneID:
129852713
NCBI-ProteinID:
XP_055774305
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Position
4:68751715..68778319
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AA seq
618 aa
AA seq
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MADQRMDISSTMNEFMSPGSTDLISSIGTPGMDYTRKRKSSTTDYQIDGFSFEDSMDTDN
DRLGDHQGRIKNAREAHSQIEKRRRDKMNSFIDELAALVPTCNAMSRKLDKLTVLRMAVQ
HMKTLRGAANPYTEANYKPAFLSDDELKHLILRASDGFLFVVGCDRGKILFVSESVYKIL
NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDSKTGLPVKTDITPGPSRLC
SGARRSFFCRMKCNRPLIKMEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDD
DNEPDNEGCNLSCLVAIGQLHPHIVPQPMNNEIRVKPTEYVSRHAIDGKFVFVDQRATAI
LAYLPQELLGTSFYEYFHQDDIGHLAECHRQVLQMREKINTNCYKFKIKDGSFITLRSRW
FSFMNPWTKEVEYIVSTNTVVCVPEGSDGIYPQLAASPQSMDSVLTDGTGKRALQTVPGI
PGGTRAGAGKIGRIIAEGVMEIQRIRGSSPSSSGSSPHNFTSTPPPDMSSPGGKKIQNSG
TPEHPSAGLIPGPDSVGYPYSNNSNLSDNSHIGIDIMDEPGSSSPSNDEAAMAVIMSLLE
ADAGLGGPVDFSDLPWPL
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccaaagaatggacatttcctccacgatgaacgagttcatgtctcccggctcc
actgatctaatcagctcgatcggcacacccggcatggactacacacgcaagagaaaaagc
agcaccacagactaccaaattgatggattttcttttgaggatagcatggacacagacaat
gatagacttggtgatcatcaaggccggattaaaaatgccagggaggcccacagtcagatt
gagaagagacgcagggacaagatgaacagcttcatagacgagctggccgcactagtgcct
acatgcaacgctatgtcccggaaactggacaaactaacagtcctgcgcatggctgtccag
cacatgaagaccttaagaggtgccgctaacccctacactgaagctaactacaaaccagcc
ttcctgtcagacgacgaactgaagcacttaatactgagggcatctgatggctttctgttt
gttgttggctgtgatcgagggaagatactgtttgtttcggagtcagtctacaaaatccta
aactacagccaaaatgacctgattggccagagcctgtttgattacctgcatcctaaagac
attgccaaagtcaaggagcagctgtcctcgtcggacactgcgccacgggagcgcctcatc
gattctaaaactggccttccagtaaagacagacatcacccccggcccatccagactttgc
tctggagccaggcgatccttcttctgcaggatgaagtgcaatcggcccctcattaaaatg
gaggacaaggactttccttccacctgctccaagaagaaagctgaccgtaagagcttctgc
acaatacacagtactggctacctgaagagctggccacccaccaagatgggtctagatgat
gacaatgaaccggacaacgagggctgcaacctcagttgcctggtggccattggacagctg
catccccacattgtccctcagccaatgaacaatgagatccgtgtcaaacccactgagtat
gtctcacgccatgccatcgatgggaagtttgtctttgttgatcagagggccactgccatt
ttggcttatctaccccaagagttgctgggtacatcgttttatgaatactttcatcaagat
gacataggacaccttgcggaatgtcatagacaagtgctccagatgagggagaagatcaat
acaaactgctacaagttcaaaataaaagacggctcctttatcacactgagaagtcgctgg
ttcagttttatgaacccttggaccaaagaggtggagtacattgtctccaccaacactgtt
gtctgtgtgcctgaaggatctgatggcatctatcctcagctcgccgcctccccccagagc
atggatagtgtactcacagacggaactggcaagcgggcccttcagaccgtgcctggcatc
cccggcggcacaagggcaggggcgggaaagatcggccggataatcgcagaaggggtgatg
gagatccagaggataagaggctcctcgccctccagctctggctccagtcctcataacttc
accagcactccacccccagacatgtcgtccccagggggaaagaagatacagaacagtgga
actccagaacatccctcagcagggctgataccgggaccagactccgtaggctatccatac
tccaacaactccaatctaagcgataactctcacattggcattgacatcatggatgagcca
ggctccagcagcccgagtaatgacgaggcagccatggctgtgatcatgagccttctggag
gcagacgcagggttgggaggcccagtggacttcagtgacctgccctggccactgtga
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