Salvelinus fontinalis (brook trout): 129853065
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Entry
129853065 CDS
T11136
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A-like isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfon03036
]
129853065
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
129853065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
ERCC3_RAD25_C
HHH_3
Motif
Other DBs
NCBI-GeneID:
129853065
NCBI-ProteinID:
XP_055774699
LinkDB
All DBs
Position
4:complement(10251630..10278546)
Genome browser
AA seq
1017 aa
AA seq
DB search
MSLFNLDRFRFDNNKATSNQDKYSGSVSPESEKENKPARVTTPMANLGKPGRGVVFEDVI
SDSDDDLASDSMRDKLTKVVKEPVKKPVKKPVKKPVKKPVKKPVKLEVREMTEPYDKEDQ
VDKELDERLEKLQEIFPNRNRKELLEVIESTSTLDGAVASCLMFGDKDSTRKKKPDGSSS
CRDKDVVQQPSKRKRTSPAEDSEEEGAEPSWERQEAMVRKLQRKFFDQDKEELRAVLQEH
EWNVADALEALRMFSDPEEYSSSPEVKKKEPKAKSDTKSDAKPSRESKDGMEEAKPSKAS
PLKWMFKKFAPESKPTSSSNSVSLKMSNGTSMAKMEAVERKRKAHTSDERASSSEDEETA
SSEFEDEDLDSGAEDVGTSKLQGQILLFFQEASLDELSLIAGCSVKKAKKIVELRPFALW
SNLKELFQKEKGLSLVLLLGCRVVLRERAVVQGLMSKCQNISGKMLKGVNQVIDKDMGSV
TQPSILNRKLQLKPYQLIGLKWLLLLHQHKLSGILADEMGLGKTIQAIAFLARLYQDGIK
GPHLITVPASTLDNWVRELKLWCPRLKVLVYYGSMEDRQYLRHDILNNKLDFNVIVSTYS
LAIGNDSDRSLFRKLKLKYAVFDEGHMLKNMKSLRYRHLMAINAEHRLLLTGTPLQNNLL
ELMSLLNFIMPSMFSSSTTQLVKMFSMKSYEEQSCFERDRITQAKLIMKPFILRRVKSEV
LKLLPAKEEKLIFCPMSEKQQQLYQTMVGKFKKSAIGEKRELCNVMMQLRKMANHPLLHR
QYYTTERLEAMSGLMLKEPTHFDADPVLIQEDMAVMSDFELHTLCQKYSSLNKYQLDKDL
VLDSGKFHLLQTLLATLKTKGDRVVLFSQFTIMMDIVEILLQHLGHRYIRLDGSTPIADR
IVLIDDYNTDPEIFVFMLSTHAGGLGINLTSANVVIMHDIDYNPYNDKQAEDRCHRLGQT
RTVQVIKLIHKDTIEGSMLQLGQKKLKLEQDMTAAEEGDEGTIPEDMASLLKASLGL
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtttaatttggaccggtttcgttttgacaataataaagcaacgtctaaccag
gataaatacagcggttccgtaagtccagagtcagaaaaggagaataaaccagcacgagta
acaacacctatggccaacctaggaaaacctgggcgaggagtagtgtttgaagatgtcatc
agtgactctgatgacgatttggcaagtgattcgatgagggataaattaacgaaagtggtg
aaggaaccagtgaagaaaccagtgaagaaaccagtgaagaaaccagtgaagaaaccagtg
aagaaaccagtgaagctagaggtaagagagatgactgagccatatgataaggaagaccaa
gttgacaaggagctggacgagagactggaaaaactgcaggaaatcttccctaacagaaac
aggaaggagttgctggaggtgattgaaagcacaagcactttagatggtgccgtagcctca
tgcctgatgtttggtgacaaagactcaacgcggaagaagaaaccggacggatccagcagt
tgtcgagacaaagatgtggtccagcagcccagcaagaggaagagaacgtctccggctgaa
gactctgaagaggagggcgcagagcccagctgggaaagacaggaggccatggttaggaaa
ctgcagaggaagttctttgaccaggataaggaagaactcagggctgtgctccaggaacat
gagtggaacgtggccgacgccttggaggcgcttcgcatgttctctgacccagaggaatac
tccagctcccctgaagtcaagaaaaaggaacccaaagccaagagcgacaccaagagtgac
gccaagccgagcagagagtccaaggacggcatggaggaagccaagccaagcaaagcttcc
cctctaaaatggatgttcaagaaatttgcccctgaatctaaacctacctcctcctcaaat
tcggtgagcctgaagatgtccaacgggaccagcatggctaaaatggaggcagtggagagg
aagaggaaggctcacacctctgacgagagggccagcagctcggaggacgaggagacggcc
agcagcgagtttgaggacgaggacctggactcgggggcggaagacgtgggcacatccaag
ctccaaggccagatcctgctcttcttccaagaggcctcgctggacgagctgtccctcatc
gccggctgttcggtgaagaaggccaagaagatcgtggagctgcggccttttgctttatgg
agcaacctgaaggagctgttccagaaggagaaaggcctgtctttggtgctgctgctgggc
tgtagggtggtgctgagggagagagccgtggtccagggcctcatgtccaagtgccagaac
atctcgggcaagatgttgaagggagtcaaccaggtcatcgacaaggacatgggctccgtg
acccagccctccatcctcaacagaaagttacaattgaaaccctaccagttgattgggctg
aagtggcttctcctgctgcaccaacacaagctgagtggaatcctggctgatgagatgggt
ttgggaaagaccatccaggccatagccttcctggccagactgtaccaggatggcatcaaa
ggcccccacctcatcactgtgcccgcctccaccctggataactgggttcgggagctaaag
ctgtggtgccccagactcaaggtgctagtctattacggctctatggaggaccggcagtac
ctgcgacatgacatccttaataataagttggacttcaacgtcatcgtgtccacatacagc
ctggccatcggcaacgacagcgaccgcagtctcttccgcaagctcaaactgaagtacgcc
gtgtttgacgagggccacatgctgaagaacatgaagtccctccgttaccgccacctcatg
gccatcaatgctgagcaccggttgctcctgactggcacccctctgcagaacaacctgctg
gagttgatgtcgctgctcaacttcatcatgccctccatgttctccagcagcaccacgcag
ttagtcaagatgttctccatgaaatcctatgaggagcagagttgtttcgagagggaccgc
atcacccaggctaaactcatcatgaaacccttcatcctcaggcgagtcaagagtgaggtt
cttaagctgctgccagcgaaggaggagaagttgatattctgcccaatgagtgagaagcag
cagcagctttaccagaccatggtgggcaagttcaagaagtctgccatcggagagaagaga
gagctgtgcaacgtgatgatgcagctgaggaagatggccaaccaccctctgctgcaccgg
cagtactacaccacagagagactggaggccatgagtggcctcatgctcaaggagccgacc
cattttgatgcggacccagtgctgatccaagaggacatggctgtgatgtctgactttgag
ctccacacactgtgccagaagtactcgtccctgaacaaataccagctggacaaagacctt
gtactggactctgggaagtttcacctgctccagacactacttgccacgctcaagaccaag
ggagaccgggtagtgctcttcagtcagttcaccataatgatggacatcgtagagattctg
ctccaacacctgggccaccgctacatccgactggacggctccacgcctatagcagacagg
atcgtgctgattgacgactacaacacggacccggaaatctttgtgttcatgctgtcgacg
catgcgggcggcctgggtatcaacctgacctcggccaacgtggtcatcatgcatgacatc
gactacaacccttacaacgacaaacaggctgaggaccgttgccacagactagggcagacc
aggacagtccaggtgatcaagctgatccataaggacaccatagagggctccatgctgcag
ctgggtcagaagaaactcaaactggagcaggacatgactgctgccgaagagggtgacgag
ggcaccatacccgaggacatggcctctctgctcaaagcatcactgggcctgtga
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