Salvelinus fontinalis (brook trout): 129853127
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Entry
129853127 CDS
T11136
Name
(RefSeq) DNA repair protein XRCC4-like isoform X1
KO
K10886
DNA-repair protein XRCC4
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
129853127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfon03400
]
129853127
DNA repair and recombination proteins [BR:
sfon03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
129853127
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4_CC
XRCC4
ENOX1
ZapB
GEMI5_RBS
KxDL
Ax_dynein_light
DivIC
Sulfatase_C
Vps23_core
OmpH
Motif
Other DBs
NCBI-GeneID:
129853127
NCBI-ProteinID:
XP_055774821
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Position
4:13451656..13522478
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AA seq
297 aa
AA seq
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MSGTVRQISVVLDPSIPYFLRVDWAEDLGAGFTLALCDGSSSWIGEVPEEEMMRKATELG
VKREKYVEDLHQALTGRGESRRGRGGVAEKEEYLFHLSSDHGCLSYDKKTQRGVLVNMGA
VELYPAPVDLNREMIAHTLEHSADLEAENRRLQEKNQTLRQEREHLLADLEKHVQEMETM
EGDLFSRFIMLLNEKKAKIRALQDTIRHVQQQLDQGVEEQENHRVTGVTVKSKAGDSIKE
EEDLPQSFHPSQAPTVLIRDISSQTSSMEDVLPNRKHGLCYHQSPELKVKKPIPDQK
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtacggtccgtcagatcagtgtggtgttggacccgagcatcccctatttcctg
cgggtggactgggccgaagacctgggtgctgggttcactctcgccctctgtgacggcagc
tcgtcctggatcggagaagtaccagaggaggagatgatgaggaaagccacagagttggga
gtgaaaagggagaaatatgtggaagatcttcatcaggcactgaccggaagaggagaaagc
agaagaggaagaggaggagtggcagaaaaggaggagtacctgttccacctctcctctgac
cacggttgtctgtcgtatgacaagaagacccagagaggcgttttggtgaacatgggtgca
gtggagctgtaccctgcccctgtggatctcaacagggagatgatagcccacactctggag
cacagcgctgacctggaggcagagaacagacggctgcaggagaagaatcagacactccgg
caggagcgggagcacctccttgcagatctggagaagcatgtccaggagatggagacgatg
gagggagacctgttctctcgtttcatcatgctgcttaatgagaagaaggccaagatcagg
gccctgcaggacaccatcagacacgtccaacagcagctggaccagggggtggaagagcag
gagaaccaccgggtaactggggtaactgtcaaatccaaggctggcgacagcattaaggag
gaggaggacctgcctcagagcttccacccatctcaggcacccacagtgctcatcagagac
atttcaagccagacgagctctatggaggatgtgttgcccaaccgcaagcatgggctctgt
taccaccagagcccagagttaaaggttaagaagcctattccagaccagaagtaa
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